prot_H-elongata_contig147075.3192.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig147075.3192.1
Unique Nameprot_H-elongata_contig147075.3192.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length167
Homology
BLAST of mRNA_H-elongata_contig147075.3192.1 vs. uniprot
Match: A0A6H5KZH7_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH7_9PHAE)

HSP 1 Score: 101 bits (251), Expect = 9.290e-22
Identity = 58/186 (31.18%), Postives = 103/186 (55.38%), Query Frame = 0
Query:    2 AYLEVDVDEEIYVELSEAYRDFRKQVGQLKEAMYGLR---------------------FQANPCVFRRILHGAVVVVIVVYVDDLLVLSATKRDEEQAVRDLCSCLPIKDMGEASYYLGCHITRDRNAGTLKFDQHQYIQTVAERFGVTKTSIMPKVLSKSDSPQTYAEVEEMRQIPYREIVGTLM 166
            A+++ ++D E+++++        ++V +L +++YGL+                       ++PCV R ++   VV ++ ++VDD+L  + TK   E  V  L   LP K++GE  ++LGC   RDR AGT++  Q  YI++V ERF + +TS +P  L+  D  ++  E E    +P+RE+VG+LM
Sbjct: 1005 AFVQSELDHEVFMKMPPGCGSMSEKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLRFMMGDEVVGMVAIHVDDILY-AGTKSLAEVVVAALGDSLPTKNLGEVKFFLGCEYIRDRKAGTIEISQESYIRSVLERFNIVRTSSIPASLNNDD--RSLMEEEGAGDVPFREVVGSLM 1187          
BLAST of mRNA_H-elongata_contig147075.3192.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE)

HSP 1 Score: 99.0 bits (245), Expect = 5.880e-21
Identity = 62/186 (33.33%), Postives = 99/186 (53.23%), Query Frame = 0
Query:    2 AYLEVDVDEEIYVELSEAYRDFRKQVGQLKEAMYGLR---------------------FQANPCVFRRILHGAVVVVIVVYVDDLLVLSATKRDEEQAVRDLCSCLPIKDMGEASYYLGCHITRDRNAGTLKFDQHQYIQTVAERFGVTKTSIMPKVLSKSDSPQTYAEVEEMRQIPYREIVGTLM 166
            AY    +DEE++++L     D   ++ + + A+YGL+                      +A+PCVFR+++   VV++IV+YVDD+LV + +  D E+ +  L    P K++GE  ++ GC I RD  AGTL+  Q  YI ++ ERF V  TS +P        P+   E EE  + P RE +G++M
Sbjct:  853 AYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILV-AGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKR--EDEEGGEWPVREAIGSMM 1035          
BLAST of mRNA_H-elongata_contig147075.3192.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE)

HSP 1 Score: 99.0 bits (245), Expect = 6.000e-21
Identity = 62/186 (33.33%), Postives = 99/186 (53.23%), Query Frame = 0
Query:    2 AYLEVDVDEEIYVELSEAYRDFRKQVGQLKEAMYGLR---------------------FQANPCVFRRILHGAVVVVIVVYVDDLLVLSATKRDEEQAVRDLCSCLPIKDMGEASYYLGCHITRDRNAGTLKFDQHQYIQTVAERFGVTKTSIMPKVLSKSDSPQTYAEVEEMRQIPYREIVGTLM 166
            AY    +DEE++++L     D   ++ + + A+YGL+                      +A+PCVFR+++   VV++IV+YVDD+LV + +  D E+ +  L    P K++GE  ++ GC I RD  AGTL+  Q  YI ++ ERF V  TS +P        P+   E EE  + P RE +G++M
Sbjct: 1232 AYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILV-AGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKR--EDEEGGEWPVREAIGSMM 1414          
BLAST of mRNA_H-elongata_contig147075.3192.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE)

HSP 1 Score: 99.0 bits (245), Expect = 6.020e-21
Identity = 62/186 (33.33%), Postives = 99/186 (53.23%), Query Frame = 0
Query:    2 AYLEVDVDEEIYVELSEAYRDFRKQVGQLKEAMYGLR---------------------FQANPCVFRRILHGAVVVVIVVYVDDLLVLSATKRDEEQAVRDLCSCLPIKDMGEASYYLGCHITRDRNAGTLKFDQHQYIQTVAERFGVTKTSIMPKVLSKSDSPQTYAEVEEMRQIPYREIVGTLM 166
            AY    +DEE++++L     D   ++ + + A+YGL+                      +A+PCVFR+++   VV++IV+YVDD+LV + +  D E+ +  L    P K++GE  ++ GC I RD  AGTL+  Q  YI ++ ERF V  TS +P        P+   E EE  + P RE +G++M
Sbjct: 1252 AYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDQVVVMIIVIYVDDILV-AGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKR--EDEEGGEWPVREAIGSMM 1434          
BLAST of mRNA_H-elongata_contig147075.3192.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE)

HSP 1 Score: 99.0 bits (245), Expect = 6.040e-21
Identity = 62/186 (33.33%), Postives = 99/186 (53.23%), Query Frame = 0
Query:    2 AYLEVDVDEEIYVELSEAYRDFRKQVGQLKEAMYGLR---------------------FQANPCVFRRILHGAVVVVIVVYVDDLLVLSATKRDEEQAVRDLCSCLPIKDMGEASYYLGCHITRDRNAGTLKFDQHQYIQTVAERFGVTKTSIMPKVLSKSDSPQTYAEVEEMRQIPYREIVGTLM 166
            AY    +DEE++++L     D   ++ + + A+YGL+                      +A+PCVFR+++   VV++IV+YVDD+LV + +  D E+ +  L    P K++GE  ++ GC I RD  AGTL+  Q  YI ++ ERF V  TS +P        P+   E EE  + P RE +G++M
Sbjct: 1395 AYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILV-AGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKR--EDEEGGEWPVREAIGSMM 1577          
BLAST of mRNA_H-elongata_contig147075.3192.1 vs. uniprot
Match: A0A6H5L3I1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3I1_9PHAE)

HSP 1 Score: 98.2 bits (243), Expect = 1.090e-20
Identity = 57/186 (30.65%), Postives = 102/186 (54.84%), Query Frame = 0
Query:    2 AYLEVDVDEEIYVELSEAYRDFRKQVGQLKEAMYGLR---------------------FQANPCVFRRILHGAVVVVIVVYVDDLLVLSATKRDEEQAVRDLCSCLPIKDMGEASYYLGCHITRDRNAGTLKFDQHQYIQTVAERFGVTKTSIMPKVLSKSDSPQTYAEVEEMRQIPYREIVGTLM 166
            A+++ ++D E+++++        ++V +L +++YGL+                       ++PCV   ++   VV ++ ++VDD+L  + TK   E  V  L   LP K++GE  ++LGC   RDR AGT++  Q  YI++V ERF + +TS +P  L+  D  ++  E E    +P+RE+VG+LM
Sbjct:  795 AFVQSELDHEVFMKMPPGCGSMSEKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLCFMMGDEVVGMVAIHVDDILY-AGTKSLAEVVVAALGDSLPTKNLGEVKFFLGCEYIRDRKAGTIEISQESYIRSVLERFNIVRTSSIPASLNNDD--RSLMEEEGAGDVPFREVVGSLM 977          
BLAST of mRNA_H-elongata_contig147075.3192.1 vs. uniprot
Match: A0A6H5JEW4_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEW4_9PHAE)

HSP 1 Score: 98.2 bits (243), Expect = 1.100e-20
Identity = 62/186 (33.33%), Postives = 99/186 (53.23%), Query Frame = 0
Query:    2 AYLEVDVDEEIYVELSEAYRDFRKQVGQLKEAMYGLR---------------------FQANPCVFRRILHGAVVVVIVVYVDDLLVLSATKRDEEQAVRDLCSCLPIKDMGEASYYLGCHITRDRNAGTLKFDQHQYIQTVAERFGVTKTSIMPKVLSKSDSPQTYAEVEEMRQIPYREIVGTLM 166
            AY    +DEE++++L     D   ++ + + A+YGL+                      +A+PCVFR+++   VV++IV+YVDD+LV + +  D E+ +  L   +P K++GE  ++ GC I RD  AGTLK  Q  YI ++ +RF V  TS +P       SP    E EE  + P RE + ++M
Sbjct:  957 AYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDQVVVMIIVIYVDDILV-AGSDEDCEELLASLNKKIPTKNLGECEWFDGCAIERDEEAGTLKISQTAYIDSMVKRFDVQLTSRIPA------SPGPKREDEEGGEWPVREAIASMM 1135          
BLAST of mRNA_H-elongata_contig147075.3192.1 vs. uniprot
Match: A0A6H5JRE7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRE7_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 1.380e-20
Identity = 51/126 (40.48%), Postives = 79/126 (62.70%), Query Frame = 0
Query:   41 ANPCVFRRILHGAVVVVIVVYVDDLLVLSATKRDEEQAVRDLCSCLPIKDMGEASYYLGCHITRDRNAGTLKFDQHQYIQTVAERFGVTKTSIMPKVLSKSDSPQTYAEVEEMRQIPYREIVGTLM 166
            ++PCV R ++   V+ +  ++VDD+L  + TKR  E  V  L   LP K++GE  ++LGC I+RDR AGT++  Q  YI+ V ERF + +TS +P   S ++  ++  E EE   +P+RE+VG LM
Sbjct:   49 SDPCVLRFMMGDEVMGIFAIHVDDILY-AGTKRLAEVIVEALGDSLPTKNLGEVRFFLGCEISRDREAGTIEISQESYIRNVLERFNICRTSSIPA--SPANDSRSVMEDEEAGDVPFREVVGCLM 171          
BLAST of mRNA_H-elongata_contig147075.3192.1 vs. uniprot
Match: A0A6H5KCN6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCN6_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 1.720e-20
Identity = 62/186 (33.33%), Postives = 99/186 (53.23%), Query Frame = 0
Query:    2 AYLEVDVDEEIYVELSEAYRDFRKQVGQLKEAMYGLR-------FQA--------------NPCVFRRILHGAVVVVIVVYVDDLLVLSATKRDEEQAVRDLCSCLPIKDMGEASYYLGCHITRDRNAGTLKFDQHQYIQTVAERFGVTKTSIMPKVLSKSDSPQTYAEVEEMRQIPYREIVGTLM 166
            AY    + EEIY+ L +    +  +  +++ A+YGL+       F+A              +PC+FR+++ G VV +IV+YVDD++ LSAT+ + E+ +  L    P+KD+G+ ++Y GC I  D   GT K  Q  YI+++  RF VT T+  P V+     P+   + E     P RE +G LM
Sbjct:   20 AYTHAKLKEEIYLRLPDGCGVWTGKAVKVERALYGLKQSGREWGFEAADALISNGYEQCRVDPCIFRKVVDGEVVGLIVIYVDDIM-LSATEEEREELLASLQKRFPVKDLGDCTWYDGCAIEVDLENGTTKLSQTAYIESMLNRFNVTTTAPTPAVVDDDLGPKR--DDESSVDKPVRETIGCLM 202          
BLAST of mRNA_H-elongata_contig147075.3192.1 vs. uniprot
Match: A0A6H5JQN6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQN6_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 2.630e-20
Identity = 61/186 (32.80%), Postives = 100/186 (53.76%), Query Frame = 0
Query:    2 AYLEVDVDEEIYVELSEAYRDFRKQVGQLKEAMYGLR---------------------FQANPCVFRRILHGAVVVVIVVYVDDLLVLSATKRDEEQAVRDLCSCLPIKDMGEASYYLGCHITRDRNAGTLKFDQHQYIQTVAERFGVTKTSIMPKVLSKSDSPQTYAEVEEMRQIPYREIVGTLM 166
            AY    +DEE++++L     D   ++ + + A+YGL+                      +A+PCVFR+++   VV++IV+YVDD+LV + +  D E+ +  L    P K++GE  ++ GC I RD +AGTL+  Q  YI ++ ERF V  TS +P        P+   E ++  + P RE VG++M
Sbjct:  444 AYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILV-AGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVDAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKR--EDDKGGEWPVREAVGSMM 626          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig147075.3192.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZH7_9PHAE9.290e-2231.18Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSG8_9PHAE5.880e-2133.33Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JZQ8_9PHAE6.000e-2133.33Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN00_9PHAE6.020e-2133.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KF60_9PHAE6.040e-2133.33Uncharacterized protein n=12 Tax=Ectocarpus sp. CC... [more]
A0A6H5L3I1_9PHAE1.090e-2030.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JEW4_9PHAE1.100e-2033.33CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JRE7_9PHAE1.380e-2040.48Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KCN6_9PHAE1.720e-2033.33Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JQN6_9PHAE2.630e-2032.80Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 13..33
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 48..118
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 54..132
e-value: 1.6E-10
score: 41.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig147075contigH-elongata_contig147075:485..1061 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig147075.3192.1mRNA_H-elongata_contig147075.3192.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig147075 2..1313 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig147075.3192.1 ID=prot_H-elongata_contig147075.3192.1|Name=mRNA_H-elongata_contig147075.3192.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=167bp
MAYLEVDVDEEIYVELSEAYRDFRKQVGQLKEAMYGLRFQANPCVFRRIL
HGAVVVVIVVYVDDLLVLSATKRDEEQAVRDLCSCLPIKDMGEASYYLGC
HITRDRNAGTLKFDQHQYIQTVAERFGVTKTSIMPKVLSKSDSPQTYAEV
EEMRQIPYREIVGTLM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2