prot_H-elongata_contig146916.3183.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig146916.3183.1
Unique Nameprot_H-elongata_contig146916.3183.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length119
Homology
BLAST of mRNA_H-elongata_contig146916.3183.1 vs. uniprot
Match: A0A6H5KLY7_9PHAE (JAB_MPN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLY7_9PHAE)

HSP 1 Score: 118 bits (296), Expect = 2.880e-31
Identity = 58/75 (77.33%), Postives = 68/75 (90.67%), Query Frame = 0
Query:   45 LTIRKLTVISISDHHTRVAMGGGAQEAGGRVIGLLFGSQHGLDVSIFDAIEVACTAVGKDGVELNEGLIEKQKDL 119
            + +  LTVI+ISDHHTRV+ GGGAQEAGGRVIGLLFGSQ+G DVSI+DA+EVACTAVG +G+ELNE L+EKQKDL
Sbjct:   36 IMLHPLTVITISDHHTRVSTGGGAQEAGGRVIGLLFGSQNGRDVSIYDAMEVACTAVGANGLELNEALVEKQKDL 110          
BLAST of mRNA_H-elongata_contig146916.3183.1 vs. uniprot
Match: D8LBH4_ECTSI (COP9 signalosome complex subunit 6 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBH4_ECTSI)

HSP 1 Score: 116 bits (291), Expect = 2.890e-29
Identity = 57/75 (76.00%), Postives = 68/75 (90.67%), Query Frame = 0
Query:   45 LTIRKLTVISISDHHTRVAMGGGAQEAGGRVIGLLFGSQHGLDVSIFDAIEVACTAVGKDGVELNEGLIEKQKDL 119
            + +  LTVI+ISDHHTRV+ GGGAQEAGGRVIGLLFGSQ+G DVSI+DA+EVACTAVG +G+ELNE L+EKQK+L
Sbjct:   36 IMLHPLTVITISDHHTRVSTGGGAQEAGGRVIGLLFGSQNGRDVSIYDAMEVACTAVGANGLELNEALVEKQKNL 110          
BLAST of mRNA_H-elongata_contig146916.3183.1 vs. uniprot
Match: A0A7S4A6I1_9STRA (COP9 signalosome complex subunit 6 (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A6I1_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 1.600e-8
Identity = 31/75 (41.33%), Postives = 47/75 (62.67%), Query Frame = 0
Query:   45 LTIRKLTVISISDHHTRVAMGGGAQEAGGRVIGLLFGSQHGLDVSIFDAIEVACTAVGKDGVELNEGLIEKQKDL 119
            + +  L ++ +SDH TRV++GG  Q AG  V+GLLFG Q GL+V + DAIEV  T    +  +++   +E+ K L
Sbjct:   45 VALHPLAIVGVSDHFTRVSVGGSRQGAGSPVVGLLFGMQRGLEVDVVDAIEVHLT----EATKVDAQFLEQSKAL 115          
BLAST of mRNA_H-elongata_contig146916.3183.1 vs. uniprot
Match: A0A8J2WWX0_9STRA (Trehalase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WWX0_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 2.370e-8
Identity = 31/75 (41.33%), Postives = 47/75 (62.67%), Query Frame = 0
Query:   45 LTIRKLTVISISDHHTRVAMGGGAQEAGGRVIGLLFGSQHGLDVSIFDAIEVACTAVGKDGVELNEGLIEKQKDL 119
            + +  L ++ +SDH TRV++GG  Q AG  V+GLLFG Q GL+V + DAIEV  T    +  +++   +E+ K L
Sbjct:  704 VALHPLAIVGVSDHFTRVSVGGSRQGAGSPVVGLLFGMQRGLEVDVVDAIEVHLT----EATKVDAQFLEQSKAL 774          
BLAST of mRNA_H-elongata_contig146916.3183.1 vs. uniprot
Match: F0Y0C1_AURAN (Trehalase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y0C1_AURAN)

HSP 1 Score: 57.0 bits (136), Expect = 5.320e-7
Identity = 31/73 (42.47%), Postives = 46/73 (63.01%), Query Frame = 0
Query:   47 IRKLTVISISDHHTRVAMGGGAQEAGGRVIGLLFGSQHGLDVSIFDAIEVACTAVGKDGVELNEGLIEKQKDL 119
            +  L ++ +SDH TRV +GG        V+GLLFG Q GLDV++FDAIE++      DG +L+   ++KQ +L
Sbjct:  844 LHPLAIVGVSDHFTRVKLGGARVAPDSPVLGLLFGKQVGLDVAVFDAIELSMA----DG-KLDHDFLKKQAEL 911          
BLAST of mRNA_H-elongata_contig146916.3183.1 vs. uniprot
Match: A0A7S4T8J8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4T8J8_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 1.350e-6
Identity = 29/52 (55.77%), Postives = 33/52 (63.46%), Query Frame = 0
Query:   45 LTIRKLTVISISDHHTRVAMGGGAQEAGGRVIGLLFGSQHGLDVSIFDAIEV 96
            L +  L +I ISDHHTRV  GG A      V+GLLFG Q GL VSI DA E+
Sbjct:   32 LKVHPLAIIGISDHHTRVMTGGSALPPNSPVVGLLFGYQEGLVVSILDAEEM 83          
BLAST of mRNA_H-elongata_contig146916.3183.1 vs. uniprot
Match: A0A7S2B7N9_9STRA (COP9 signalosome complex subunit 6 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B7N9_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 2.020e-6
Identity = 32/74 (43.24%), Postives = 45/74 (60.81%), Query Frame = 0
Query:   47 IRKLTVISISDHHTRVAMGGGAQEAGGRVIGLLFGSQHGLDVSIFDAIEVACTAVGKDGVE-LNEGLIEKQKDL 119
            +  L +I+ISDH T +  G   +  G +V+GLL+G Q GL+VSI DA E+  T +G DGV  +    +  QKDL
Sbjct:   28 LHPLAIITISDHFTCIESGASVKPRGSKVLGLLWGKQQGLEVSIMDAQELHYT-LGDDGVPVITAEKVNSQKDL 100          
BLAST of mRNA_H-elongata_contig146916.3183.1 vs. uniprot
Match: A0A7S2HK81_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HK81_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 2.130e-6
Identity = 28/52 (53.85%), Postives = 33/52 (63.46%), Query Frame = 0
Query:   45 LTIRKLTVISISDHHTRVAMGGGAQEAGGRVIGLLFGSQHGLDVSIFDAIEV 96
            L +  L +I ISDHHTRV  GG A      V+GLLFG Q GL +SI DA E+
Sbjct:   33 LKVHPLAIIGISDHHTRVLTGGSALPPNSPVVGLLFGYQDGLTISILDAEEM 84          
BLAST of mRNA_H-elongata_contig146916.3183.1 vs. uniprot
Match: W7TEK2_9STRA (COP9 signalosome complex subunit 6 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TEK2_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 3.020e-6
Identity = 27/75 (36.00%), Postives = 44/75 (58.67%), Query Frame = 0
Query:   45 LTIRKLTVISISDHHTRVAMGGGAQEAGGRVIGLLFGSQHGLDVSIFDAIEVACTAVGKDGVELNEGLIEKQKDL 119
            + +  L +++I DH TRV +GG       R++G+LFG Q+GL VSI DA E+         V++  G + ++K+L
Sbjct:   56 VALHPLALVTICDHCTRVKVGGSLLPVTSRILGILFGVQNGLQVSITDAFELQYEITENGSVKIPAGYVNEKKEL 130          
BLAST of mRNA_H-elongata_contig146916.3183.1 vs. uniprot
Match: A0A7R9ZAP9_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZAP9_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 5.710e-6
Identity = 36/91 (39.56%), Postives = 45/91 (49.45%), Query Frame = 0
Query:    6 LSIIQDLPVSLNSRAPTSQTHASPNDVDHLHTDVVNYSPLTIRKLTVISISDHHTRVAMGGGAQEAGGRVIGLLFGSQHGLDVSIFDAIEV 96
            ++I+ D+       A TS+T A                 L +  L +I ISDHHTRV  GG A      V+GLLFG Q GL VSI DA E+
Sbjct:    1 MTIMMDVDPPSRDAAATSETGAGGGSQQE--------KTLKVHPLAIIGISDHHTRVVTGGSALPKTAPVMGLLFGYQDGLTVSIVDAEEM 83          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig146916.3183.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A6H5KLY7_9PHAE2.880e-3177.33JAB_MPN domain-containing protein n=1 Tax=Ectocarp... [more]
D8LBH4_ECTSI2.890e-2976.00COP9 signalosome complex subunit 6 n=1 Tax=Ectocar... [more]
A0A7S4A6I1_9STRA1.600e-841.33COP9 signalosome complex subunit 6 (Fragment) n=1 ... [more]
A0A8J2WWX0_9STRA2.370e-841.33Trehalase n=1 Tax=Pelagomonas calceolata TaxID=356... [more]
F0Y0C1_AURAN5.320e-742.47Trehalase n=1 Tax=Aureococcus anophagefferens TaxI... [more]
A0A7S4T8J8_9STRA1.350e-655.77Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A7S2B7N9_9STRA2.020e-643.24COP9 signalosome complex subunit 6 n=1 Tax=Dictyoc... [more]
A0A7S2HK81_9STRA2.130e-653.85Hypothetical protein (Fragment) n=1 Tax=Helicothec... [more]
W7TEK2_9STRA3.020e-636.00COP9 signalosome complex subunit 6 n=2 Tax=Monodop... [more]
A0A7R9ZAP9_9STRA5.710e-639.56Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.140.10coord: 35..119
e-value: 2.6E-9
score: 38.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig146916contigH-elongata_contig146916:1091..1447 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig146916.3183.1mRNA_H-elongata_contig146916.3183.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig146916 943..1447 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig146916.3183.1 ID=prot_H-elongata_contig146916.3183.1|Name=mRNA_H-elongata_contig146916.3183.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=119bp
MPHVVLSIIQDLPVSLNSRAPTSQTHASPNDVDHLHTDVVNYSPLTIRKL
TVISISDHHTRVAMGGGAQEAGGRVIGLLFGSQHGLDVSIFDAIEVACTA
VGKDGVELNEGLIEKQKDL
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