prot_H-elongata_contig14689.3180.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig14689.3180.1
Unique Nameprot_H-elongata_contig14689.3180.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length166
Homology
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BLAST of mRNA_H-elongata_contig14689.3180.1 vs. uniprot
Match: D8LKA6_ECTSI (HECT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKA6_ECTSI)

HSP 1 Score: 159 bits (401), Expect = 6.090e-42
Identity = 98/168 (58.33%), Postives = 125/168 (74.40%), Query Frame = 0 
Query:    1 KELVRVVNDSRIESGLAGGGXXXXXXXXXXXXXXX----------PKSILTIVAAVPSLGIPSEFKELVVTHAEPLAEIINVDPGVLENRLAVLLRIEGAVDTPQKLEYIVTTLEARAGRS-KGLELSINRMADPQEMVEMAMQQLAAAPPRALGQNLELKFVNEAGE 157
            K +V+VV ++ +++GLA   XXXXXXXXXX               P++ILT +AA   LGIP  F+ELVV  ++ + EI++ DP VLENRL+VLLRIEGAV+TPQKL+YI + LEARAGRS KGLEL +NRMA+P E+VE+ MQQLAAAPPRA+  + ELKFVNE G+
Sbjct:  533 KAIVKVVKENGVDTGLASSXXXXXXXXXXXSGVRRGGRGQSAGRNPRNILTAIAAETELGIPEAFRELVVEQSDAVEEILDADPAVLENRLSVLLRIEGAVETPQKLDYIASALEARAGRSGKGLELCVNRMAEPHEIVEVTMQQLAAAPPRAMAPHPELKFVNEQGQ 700
[Close]
BLAST of mRNA_H-elongata_contig14689.3180.1 vs. uniprot
Match: A0A6H5JX10_9PHAE (HECT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX10_9PHAE)

HSP 1 Score: 156 bits (395), Expect = 3.960e-41
Identity = 95/164 (57.93%), Postives = 121/164 (73.78%), Query Frame = 0 
Query:    1 KELVRVVNDSRIESGLAGGGXXXXXXXXXXXXXXX------PKSILTIVAAVPSLGIPSEFKELVVTHAEPLAEIINVDPGVLENRLAVLLRIEGAVDTPQKLEYIVTTLEARAGRS-KGLELSINRMADPQEMVEMAMQQLAAAPPRALGQNLELKFVNEAGE 157
            K +V+VV D+ +++GLA   XXXXXXXX             P++ILT +AA   LGIP  F+ELVV  ++ + EI++ DP VLENRL+VLLRIEGAV+TPQKLEYI + L+ARAGRS KGLEL INRMA+P ++VE+ MQQLAAAPP A+  + ELKF NE G+
Sbjct:  775 KAIVKVVKDNGVDTGLASSXXXXXXXXXVRRGGRGQSGGRNPRNILTAIAAETELGIPEAFRELVVEQSDAVEEILDADPAVLENRLSVLLRIEGAVETPQKLEYIASALDARAGRSRKGLELCINRMAEPHDIVEVTMQQLAAAPPWAMAPHPELKFANEEGQ 938
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14689.3180.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LKA6_ECTSI6.090e-4258.33HECT domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JX10_9PHAE3.960e-4157.93HECT domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig14689contigH-elongata_contig14689:376..1757 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig14689.3180.1mRNA_H-elongata_contig14689.3180.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig14689 376..1757 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig14689.3180.1 ID=prot_H-elongata_contig14689.3180.1|Name=mRNA_H-elongata_contig14689.3180.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=166bp
KELVRVVNDSRIESGLAGGGGGHGGRRGGRGPGRNPKSILTIVAAVPSLG
IPSEFKELVVTHAEPLAEIINVDPGVLENRLAVLLRIEGAVDTPQKLEYI
VTTLEARAGRSKGLELSINRMADPQEMVEMAMQQLAAAPPRALGQNLELK
FVNEAGESPKTRKRV*
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