prot_H-elongata_contig146644.3167.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig146644.3167.1
Unique Nameprot_H-elongata_contig146644.3167.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length51
Homology
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BLAST of mRNA_H-elongata_contig146644.3167.1 vs. uniprot
Match: D7G0F5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0F5_ECTSI)

HSP 1 Score: 74.3 bits (181), Expect = 2.980e-14
Identity = 34/49 (69.39%), Postives = 43/49 (87.76%), Query Frame = 0 
Query:    1 GAEALERVAIALGARAALPVCGPLIRKGMASWTWQQQHAALTGIGVLAN 49
            G+EALERVA ALGARAALPVC  L+++G+A W WQQQHAAL+ +G+LA+
Sbjct:  511 GSEALERVARALGARAALPVCRQLVKEGLAGWAWQQQHAALSALGILAD 559
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig146644.3167.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G0F5_ECTSI2.980e-1469.39Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..51
e-value: 2.9E-8
score: 34.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig146644contigH-elongata_contig146644:446..598 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig146644.3167.1mRNA_H-elongata_contig146644.3167.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig146644 446..598 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig146644.3167.1 ID=prot_H-elongata_contig146644.3167.1|Name=mRNA_H-elongata_contig146644.3167.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=51bp
GAEALERVAIALGARAALPVCGPLIRKGMASWTWQQQHAALTGIGVLANG
T
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like