prot_H-elongata_contig14642.3161.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig14642.3161.1
Unique Nameprot_H-elongata_contig14642.3161.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length175
Homology
BLAST of mRNA_H-elongata_contig14642.3161.1 vs. uniprot
Match: D7G7V4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7V4_ECTSI)

HSP 1 Score: 267 bits (682), Expect = 1.250e-88
Identity = 144/179 (80.45%), Postives = 155/179 (86.59%), Query Frame = 0
Query:    2 RLVTTLVRELEPHMLGYVERGLMDMAARVTYRTDLEMVVPELIRLLGEDSKSLRALKMVDQGVVLLGVYHMKGGVTRGLLTKDVRSADGWQIGIDVFE-YVQVYHKRREQSVD-IYS----GANNHFELDFEVRATFDRAMTNLTAAGLRVQRLVCSPTMQPEMRLLLESRIVGDLIIL 174
            RL +TLV ELEP  +  VERGL  +A RVT  TDLEMVVPELI LLG D K+LRALKMVDQGVVLLGV+HMKGGVTRGL+TKDVRSA GWQIG+DVFE YVQVYHKRREQSVD +YS    GA+NHFELDFEVRATFDR MT LTAAGLRVQRLVCSPTMQPEMR+ LESRI+GDLIIL
Sbjct:   34 RLTSTLVHELEPERMAEVERGLASIADRVTGTTDLEMVVPELIHLLGGDGKALRALKMVDQGVVLLGVHHMKGGVTRGLVTKDVRSASGWQIGMDVFEQYVQVYHKRREQSVDDMYSQTVDGADNHFELDFEVRATFDREMTQLTAAGLRVQRLVCSPTMQPEMRVQLESRILGDLIIL 212          
BLAST of mRNA_H-elongata_contig14642.3161.1 vs. uniprot
Match: A0A6H5L330_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L330_9PHAE)

HSP 1 Score: 266 bits (680), Expect = 2.600e-88
Identity = 143/178 (80.34%), Postives = 154/178 (86.52%), Query Frame = 0
Query:    2 RLVTTLVRELEPHMLGYVERGLMDMAARVTYRTDLEMVVPELIRLLGEDSKSLRALKMVDQGVVLLGVYHMKGGVTRGLLTKDVRSADGWQIGIDVFE-YVQVYHKRREQSVDIYS----GANNHFELDFEVRATFDRAMTNLTAAGLRVQRLVCSPTMQPEMRLLLESRIVGDLIIL 174
            RL +TLV ELEP  +  VERGL  +AARVT  TDLEMVVPELI LLG DSK+LRALKMVDQ VVLLGV+HMKGGVTRGL+TKDVRSA GWQIG+DVFE YVQVYHKRREQSVD  S    GA+NHFELDFEVRATFDR MT LTAAGLRVQRLVCSPTMQPEMR+ LESRI+GD+IIL
Sbjct:   36 RLTSTLVHELEPEKMAEVERGLASIAARVTGTTDLEMVVPELIDLLGGDSKALRALKMVDQRVVLLGVHHMKGGVTRGLVTKDVRSASGWQIGMDVFEQYVQVYHKRREQSVDDMSQTVDGADNHFELDFEVRATFDREMTQLTAAGLRVQRLVCSPTMQPEMRVQLESRILGDMIIL 213          
BLAST of mRNA_H-elongata_contig14642.3161.1 vs. uniprot
Match: A0A2R5GCW9_9STRA (Uncharacterized protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GCW9_9STRA)

HSP 1 Score: 123 bits (308), Expect = 6.910e-30
Identity = 71/175 (40.57%), Postives = 107/175 (61.14%), Query Frame = 0
Query:    3 LVTTLVRELEPH--MLGYVERGLMDMAARVTYRTDLEMVVPELIRLLGEDSKSLRALKMVDQGVVLLGVYHMKGGVTRGLLTKDVRSADGWQIGIDVFE-YVQVYHKRREQSVDIYSGANNHFELDFEVRATFDRAMTNLTAAGLRVQRLVCSPTMQPEMRLLLESRIVGDLIIL 174
            L+  L+  LEP   +   V   + ++ A VT  +DL++VV ++I  +G DSK  + LK + Q VVL     +K  +T    TKDVRS+DGW+I I + + + QV H RREQS+D +    NH+E ++E+R TFD+ M N+TAA LRV RL+ S TM   +   L++ +V  LI++
Sbjct:  298 LIVVLLAYLEPDEDVQAAVIEEVREIQASVTEASDLQLVVRQIIEAVGVDSKVTKVLKCIHQNVVLQSTVAIKEKLTMQFPTKDVRSSDGWRITITLSKGFAQVRHTRREQSIDSFGNIENHWEFEWELRMTFDQQMQNMTAAQLRVTRLMLSETMDVGLAARLKATLVDGLIVM 472          
BLAST of mRNA_H-elongata_contig14642.3161.1 vs. uniprot
Match: A0A7S2SSQ3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSQ3_9STRA)

HSP 1 Score: 108 bits (271), Expect = 3.520e-26
Identity = 67/167 (40.12%), Postives = 97/167 (58.08%), Query Frame = 0
Query:    2 RLVTTLVRELEPHMLGYVERGLMDMAARVTYRTDLEMVVPELIRLLGED-SKSLRALKMVDQGVVLLGVYHMKGGVTRG--LLTKDVRSADGWQIGIDVFEYVQVYHKRREQSVDIYSGANNHFELDFEVRATFDRAMTNLTAAGLRVQRLVCSPTMQPEMRLLLES 165
            ++V+ L   L+P     VE        R+    D ++   EL+  LG D S  +RALK+V QGVVL  +  ++     G  +LTKDVRS DGW++ IDV +  Q+ H R+EQS+D++  A  HFE +FEV AT D A++ +TAA LRV     + TM+P+ R  L+ 
Sbjct:   60 QVVSLLSAVLQPDQCTEVEELCHAYDQRLAEGADPQIACTELLGALGGDESPVVRALKLVRQGVVLGAMELLRSQAPEGVDILTKDVRSVDGWRVYIDVQQAFQIRHVRKEQSLDMFGDATQHFEYEFEVSATLDSALSGVTAAWLRVLHAEYAETMKPDRRAELQQ 226          
BLAST of mRNA_H-elongata_contig14642.3161.1 vs. uniprot
Match: A0A7S2DNQ4_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DNQ4_9STRA)

HSP 1 Score: 107 bits (268), Expect = 9.780e-25
Identity = 63/144 (43.75%), Postives = 85/144 (59.03%), Query Frame = 0
Query:   35 DLEMVVPELIRLLG-EDSKSLRALKMVDQGVVLL--GVYHMKGGVTRGLLTKDVRSADGWQIGIDVFE-YVQVYHKRREQSVDIYSGANNHFELDFEVRATFDRAMTNLTAAGLRVQRLVCSPTMQPEMRLLLESRIVGDLIIL 174
            D +M   +++  LG +DS  +R LK   QGVVL   G    K G  + L+TKDVRSADGWQ+ I V +  V + H RREQS+D++  A+NHFE  FEV  TFD  +  + A  LR+  L  + TM+ E+R  L S     L+IL
Sbjct:  219 DPQMACADMVNALGADDSPLVRLLKFTTQGVVLAAKGAILDKIGTEQHLMTKDVRSADGWQVAITVIDSVVMIRHVRREQSLDLWGDASNHFEYTFEVACTFDTKLERIFATDLRILDLTLADTMESELRRTLTSAFTTGLLIL 362          
BLAST of mRNA_H-elongata_contig14642.3161.1 vs. uniprot
Match: A0A7S3V399_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3V399_9STRA)

HSP 1 Score: 100 bits (250), Expect = 1.900e-22
Identity = 53/124 (42.74%), Postives = 78/124 (62.90%), Query Frame = 0
Query:   39 VVPELIRLLGEDSKSLRALKMVDQGVVLLGVYHMKGGVTRGLLTKDVRSADGWQIGIDVFEYVQVYHKRREQSVDIYSGAN---NHFELDFEVRATFDRAMTNLTAAGLRVQRLVCSPTMQPEM 159
            +V E++ L+G DS+S R LK ++Q +VL G + MK  +T+ + TKDVR  DGW I + + E+VQV H R+E     Y+  N   N +++++EVR TFDR M +LTAA LR+  L     M  E+
Sbjct:  177 LVKEMVALIGTDSRSARVLKCINQSIVLQGTFEMKSTLTKTVTTKDVREEDGWLIVVTLAEFVQVKHTRKEHCT--YATRNEPHNRWDIEWEVRLTFDRNMEDLTAAQLRITNLHLGDAMDEEV 298          
BLAST of mRNA_H-elongata_contig14642.3161.1 vs. uniprot
Match: L8GYF6_ACACA (WH1 domain-containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GYF6_ACACA)

HSP 1 Score: 73.2 bits (178), Expect = 5.840e-12
Identity = 47/162 (29.01%), Postives = 86/162 (53.09%), Query Frame = 0
Query:   16 LGYVERGLMDMAARVTYRTDLEMVVPELI-RLLGEDSKSLRALKMVDQGVVLLGVYHMKGGVTRG-LLTKDVRSADGWQIGIDVF-EYVQVYHKRREQSVDIYSGANNHFELDFEVRATFDRAMTNLTAAGLRVQRLVCSPTMQPEMRLLLESRIV-GDLII 173
            L  ++ GL +M  R  Y  D+E+ +  L    +G+DSK+ R  KM++Q V+ + +  +K  +T+  ++TKD  S DGW+I I +  + V + H RRE  +         F   +E+   FDR M ++ ++ L++  L     + P +R  L + +  G+++I
Sbjct:  309 LKQIQEGLEEMV-RANYTGDMELSMSSLFAESIGQDSKTARVFKMINQSVIFIPIIILKTEITKSHVMTKDDTSPDGWKIRIVIEPDTVTITHSRRELPLVSVKPDEKQFWFKWELVMVFDRKMNDMLSSSLKITELHFDEGLNPALRETLRTILNNGNMVI 469          
BLAST of mRNA_H-elongata_contig14642.3161.1 vs. uniprot
Match: L8GWR0_ACACA (Uncharacterized protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GWR0_ACACA)

HSP 1 Score: 63.2 bits (152), Expect = 1.670e-8
Identity = 45/160 (28.12%), Postives = 74/160 (46.25%), Query Frame = 0
Query:    3 LVTTLVRELEPHMLGYVERGLMDMAAR--VTYRTDLEMVVPELIRLLGEDSKSLRALKMVDQGVVLLGVYHMKGGVTRGLLTKDVRSADGWQIGIDVFEY-VQVYHKRREQSVDIYSGA-NNHFELDFEVRATFDRAMTNLTAAGLRVQRLVCSPTMQPE 158
            LV  +   LEP       +   D   +       D+ M++  +++  G   ++   LK + QGV+L   + +K  VT+ +LTKDVR+ DGW++ + +      V H RRE S+        N F  ++ +   F+ A+T L A  LR+  L   P    E
Sbjct:  259 LVCRIAEALEPRETALQVKNSFDFYKKNGTAETMDMGMIMQAILKN-GVGPRTESILKAIHQGVILTTAFEIKHKVTKSILTKDVRTKDGWRVHVHLAPNGAVVTHTRREMSIGARGPEPENEFVFEWRLSMFFNAALTELEAVKLRLTDLQFGPQTTAE 417          
BLAST of mRNA_H-elongata_contig14642.3161.1 vs. uniprot
Match: A0A7S0MTD2_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MTD2_9CRYP)

HSP 1 Score: 59.7 bits (143), Expect = 4.190e-8
Identity = 40/121 (33.06%), Postives = 63/121 (52.07%), Query Frame = 0
Query:   35 DLEMVVPELIRLLGEDSKSLRALKMVDQGVVLLGVYHMK-GGVTRG-------LLTKDVRSADGWQIGIDVFEY-VQVYHKRREQSVDIYSGANNHFELDFEVRATFDRAMTNLTAAGLRV 146
            DLE  + EL   L E   ++R  K+++Q  +   +  +K    +R        L+TKDVRSADGW+I ID+ ++ + V H RREQS+   +     + + + +   F R M +LT   L V
Sbjct:   18 DLEPYIRELFSSLDETGPTIRVFKLINQAALAAAITPLKLSAASRSANLRADMLMTKDVRSADGWRISIDIGDHEICVTHIRREQSLSGEASPEG-WSMTWRLAIFFPRDMADLTRTTLEV 137          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14642.3161.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7G7V4_ECTSI1.250e-8880.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L330_9PHAE2.600e-8880.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2R5GCW9_9STRA6.910e-3040.57Uncharacterized protein n=1 Tax=Hondaea fermentalg... [more]
A0A7S2SSQ3_9STRA3.520e-2640.12Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2DNQ4_9STRA9.780e-2543.75Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A7S3V399_9STRA1.900e-2242.74Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
L8GYF6_ACACA5.840e-1229.01WH1 domain-containing protein n=1 Tax=Acanthamoeba... [more]
L8GWR0_ACACA1.670e-828.13Uncharacterized protein n=1 Tax=Acanthamoeba caste... [more]
A0A7S0MTD2_9CRYP4.190e-833.06Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36127FAMILY NOT NAMEDcoord: 42..154

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig14642contigH-elongata_contig14642:2687..4025 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig14642.3161.1mRNA_H-elongata_contig14642.3161.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig14642 2615..5676 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig14642.3161.1 ID=prot_H-elongata_contig14642.3161.1|Name=mRNA_H-elongata_contig14642.3161.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=175bp
MRLVTTLVRELEPHMLGYVERGLMDMAARVTYRTDLEMVVPELIRLLGED
SKSLRALKMVDQGVVLLGVYHMKGGVTRGLLTKDVRSADGWQIGIDVFEY
VQVYHKRREQSVDIYSGANNHFELDFEVRATFDRAMTNLTAAGLRVQRLV
CSPTMQPEMRLLLESRIVGDLIIL*
back to top