prot_H-elongata_contig14638.3159.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig14638.3159.1
Unique Nameprot_H-elongata_contig14638.3159.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length333
Homology
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BLAST of mRNA_H-elongata_contig14638.3159.1 vs. uniprot
Match: A0A6H5LKZ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LKZ1_9PHAE)

HSP 1 Score: 277 bits (708), Expect = 1.080e-83
Identity = 168/329 (51.06%), Postives = 199/329 (60.49%), Query Frame = 0 
Query:    1 MMEKDWRTVAKALYVVHRLQRDSPPKDAARFSTFFKEKWADGVGELGRHMRAEGGENAPWLKVYSGYLAARGRGLETAQNAFCSWETLTSARQLRNGLAEANALLTKALALHFADDASSTRLG--GGSVRRACCALAFQDVADIRAMVCGTGRPPALIGVPGLGDIGPERKESSNGRPMVENSSAAIDVVVNLGDRYNLGD--PPGWKDDEVDSGNATMADGSAQESSAGVGGANWGENKKIASARSSSPSEILGATDAAGADTEEVTTASVWEESTIAVAAKEGAMYEEVSGVIAAVYSARYGAEASENTPAIPLWVQQLATLARRNG 325
            +ME+DWRTV KALYVVHRLQRDSP  +AARFS F K++WA+G GELG+HMR +GG  APWLKVY GYLA RG  LE A NAF SWETLTS RQLRN L E NALL  ALALHFA DAS    G  G +VR ACCALAFQDVAD+RAM+CGTG PPAL+GV  +GD  P + + S G P  E        V          +   PG  D+ +  G+A    G A       GG    E +  A A    P ++L                           AKE  +YE+VSGVI AVY+ARYG +A+   PA+PLWV+Q+A+LAR  G
Sbjct:  294 IMEQDWRTVVKALYVVHRLQRDSPAMEAARFSAFIKDQWAEGAGELGKHMRTDGGVYAPWLKVYCGYLATRGLRLEAATNAFRSWETLTSTRQLRNALTETNALLAGALALHFAGDASGGGRGXXGEAVRAACCALAFQDVADVRAMLCGTGAPPALLGVLRVGDESPGKSQPS-GAPEEEGERGLAQGVPQHECGVTSAEIATPGEGDEVL--GDAGAGGGDAPSRDGEEGGEEXXEVEAAAVAVRDMPEDVL-------------------------KVAKECVVYEDVSGVITAVYAARYGTDAAGKAPAVPLWVRQMASLARLAG 594
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BLAST of mRNA_H-elongata_contig14638.3159.1 vs. uniprot
Match: D8LLU9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLU9_ECTSI)

HSP 1 Score: 95.1 bits (235), Expect = 3.300e-21
Identity = 44/61 (72.13%), Postives = 49/61 (80.33%), Query Frame = 0 
Query:   36 KEKWADGVGELGRHMRAEGGENAPWLKVYSGYLAARGRGLETAQNAFCSWETLTSARQLRN 96
            K++WA+G GELG+HMR +GG  APWLKVY GYLA RG  LE A NAF SWETLTS RQLRN
Sbjct:    2 KDQWAEGAGELGKHMRTDGGVYAPWLKVYCGYLATRGLRLEAATNAFRSWETLTSIRQLRN 62
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14638.3159.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LKZ1_9PHAE1.080e-8351.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLU9_ECTSI3.300e-2172.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig14638contigH-elongata_contig14638:1491..4893 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig14638.3159.1mRNA_H-elongata_contig14638.3159.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig14638 826..6473 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig14638.3159.1 ID=prot_H-elongata_contig14638.3159.1|Name=mRNA_H-elongata_contig14638.3159.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=333bp
MMEKDWRTVAKALYVVHRLQRDSPPKDAARFSTFFKEKWADGVGELGRHM
RAEGGENAPWLKVYSGYLAARGRGLETAQNAFCSWETLTSARQLRNGLAE
ANALLTKALALHFADDASSTRLGGGSVRRACCALAFQDVADIRAMVCGTG
RPPALIGVPGLGDIGPERKESSNGRPMVENSSAAIDVVVNLGDRYNLGDP
PGWKDDEVDSGNATMADGSAQESSAGVGGANWGENKKIASARSSSPSEIL
GATDAAGADTEEVTTASVWEESTIAVAAKEGAMYEEVSGVIAAVYSARYG
AEASENTPAIPLWVQQLATLARRNGADGPHHL*
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