prot_H-elongata_contig146244.3152.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig146244.3152.1
Unique Nameprot_H-elongata_contig146244.3152.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length107
Homology
BLAST of mRNA_H-elongata_contig146244.3152.1 vs. uniprot
Match: D7FYL3_ECTSI (MutS protein homolog 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYL3_ECTSI)

HSP 1 Score: 189 bits (481), Expect = 1.010e-53
Identity = 95/107 (88.79%), Postives = 102/107 (95.33%), Query Frame = 0
Query:    1 QQVSDLKARHPGVLLLVECGYRLRFFGEDALTAAKVLRIYAHVNHNFHVASVPSFRLAVHLRRLVDAGYKVGVVRQAESAALKAAGLTESGKKSGTFKRELVAVFTQ 107
            QQV DLKA+HPGVLLLVECGYR RFFG+DAL AAKVLRIYAH++HNF VASVP+FRLAVHLRRLVDAGYKVGVVRQAESAALKAAGLTE+GKKSGTFKREL AVF+Q
Sbjct:  366 QQVVDLKAKHPGVLLLVECGYRYRFFGDDALAAAKVLRIYAHMDHNFQVASVPTFRLAVHLRRLVDAGYKVGVVRQAESAALKAAGLTETGKKSGTFKRELAAVFSQ 472          
BLAST of mRNA_H-elongata_contig146244.3152.1 vs. uniprot
Match: A0A4D9D7L2_9STRA (MutS_I domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D7L2_9STRA)

HSP 1 Score: 149 bits (376), Expect = 3.410e-42
Identity = 73/107 (68.22%), Postives = 90/107 (84.11%), Query Frame = 0
Query:    1 QQVSDLKARHPGVLLLVECGYRLRFFGEDALTAAKVLRIYAHVNHNFHVASVPSFRLAVHLRRLVDAGYKVGVVRQAESAALKAAGLTESGKKSGTFKRELVAVFTQ 107
            QQV  LK  HP  LLLVECGYR+RFFGEDAL A++VL IY +++H F+VAS+P+ R+ VHL+RLV+AG+KVGVVRQ E+AALKAAGL+ SG KSGTF+REL  VFT+
Sbjct:  170 QQVVALKRAHPDTLLLVECGYRVRFFGEDALHASQVLGIYTYIDHAFYVASIPTLRIKVHLKRLVEAGFKVGVVRQTETAALKAAGLSASGAKSGTFQRELAGVFTR 276          
BLAST of mRNA_H-elongata_contig146244.3152.1 vs. uniprot
Match: W7TSS8_9STRA (Dna mismatch repair protein msh3 (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TSS8_9STRA)

HSP 1 Score: 149 bits (376), Expect = 2.720e-41
Identity = 73/107 (68.22%), Postives = 90/107 (84.11%), Query Frame = 0
Query:    1 QQVSDLKARHPGVLLLVECGYRLRFFGEDALTAAKVLRIYAHVNHNFHVASVPSFRLAVHLRRLVDAGYKVGVVRQAESAALKAAGLTESGKKSGTFKRELVAVFTQ 107
            QQV  LK  HP  LLLVECGYR+RFFGEDAL A++VL IY +++H F+VAS+P+ R+ VHL+RLV+AG+KVGVVRQ E+AALKAAGL+ SG KSGTF+REL  VFT+
Sbjct:  278 QQVVALKRAHPDTLLLVECGYRVRFFGEDALHASQVLGIYTYIDHAFYVASIPTLRIKVHLKRLVEAGFKVGVVRQTETAALKAAGLSASGAKSGTFQRELAGVFTR 384          
BLAST of mRNA_H-elongata_contig146244.3152.1 vs. uniprot
Match: A0A2P5CUR2_PARAD (DNA mismatch repair n=2 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5CUR2_PARAD)

HSP 1 Score: 131 bits (329), Expect = 1.740e-34
Identity = 68/107 (63.55%), Postives = 85/107 (79.44%), Query Frame = 0
Query:    1 QQVSDLKARHPGVLLLVECGYRLRFFGEDALTAAKVLRIYAHVNHNFHVASVPSFRLAVHLRRLVDAGYKVGVVRQAESAALKAAGLTESGKKSGTFKRELVAVFTQ 107
            QQV DLK +HP VLL+VE GY+ RFFGEDA TAA+VL IYAH++HNF  ASVP+FRL+VH+RRLV AG+KVGVV+Q E+AA+KA GL     + G F R L A++T+
Sbjct:  131 QQVVDLKKKHPDVLLMVEVGYKYRFFGEDAETAARVLGIYAHMDHNFLTASVPTFRLSVHVRRLVSAGFKVGVVKQTETAAMKAHGLN----RLGPFCRGLSALYTK 233          
BLAST of mRNA_H-elongata_contig146244.3152.1 vs. uniprot
Match: A0A0V0HD09_SOLCH (Putative ovule protein (Fragment) n=1 Tax=Solanum chacoense TaxID=4108 RepID=A0A0V0HD09_SOLCH)

HSP 1 Score: 126 bits (316), Expect = 9.550e-34
Identity = 64/107 (59.81%), Postives = 82/107 (76.64%), Query Frame = 0
Query:    1 QQVSDLKARHPGVLLLVECGYRLRFFGEDALTAAKVLRIYAHVNHNFHVASVPSFRLAVHLRRLVDAGYKVGVVRQAESAALKAAGLTESGKKSGTFKRELVAVFTQ 107
            QQV +LK ++P VLL++E GYR RFFG+DA  AA+VL IYAH++HNF  ASVP+FRL +H+RRLV AGYKVGVV+Q E+AA+KA G      K G F R L A++T+
Sbjct:  127 QQVVELKTKYPDVLLMIEVGYRYRFFGQDAENAARVLGIYAHMDHNFLTASVPTFRLNIHVRRLVSAGYKVGVVKQTETAAIKAHG----SNKLGPFSRGLSALYTK 229          
BLAST of mRNA_H-elongata_contig146244.3152.1 vs. uniprot
Match: A0A5B7BU35_DAVIN (MutS_I domain-containing protein (Fragment) n=1 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B7BU35_DAVIN)

HSP 1 Score: 127 bits (319), Expect = 1.130e-33
Identity = 66/107 (61.68%), Postives = 83/107 (77.57%), Query Frame = 0
Query:    1 QQVSDLKARHPGVLLLVECGYRLRFFGEDALTAAKVLRIYAHVNHNFHVASVPSFRLAVHLRRLVDAGYKVGVVRQAESAALKAAGLTESGKKSGTFKRELVAVFTQ 107
            QQV DLKA++P VLL+VE GYR RFFGEDA  AA+VL IYAH++HNF  AS+P+FRL VH+RRLV+AGYKVGVV+Q E+ A+KA G      + G F R L A++T+
Sbjct:  173 QQVVDLKAKYPDVLLMVEVGYRYRFFGEDAENAARVLGIYAHMDHNFLTASIPTFRLNVHVRRLVNAGYKVGVVKQTETTAIKAHG----SNRLGPFCRGLSALYTK 275          
BLAST of mRNA_H-elongata_contig146244.3152.1 vs. uniprot
Match: A0A5C7INN3_9ROSI (DNA_MISMATCH_REPAIR_2 domain-containing protein n=1 Tax=Acer yangbiense TaxID=1000413 RepID=A0A5C7INN3_9ROSI)

HSP 1 Score: 132 bits (332), Expect = 1.210e-33
Identity = 69/107 (64.49%), Postives = 83/107 (77.57%), Query Frame = 0
Query:    1 QQVSDLKARHPGVLLLVECGYRLRFFGEDALTAAKVLRIYAHVNHNFHVASVPSFRLAVHLRRLVDAGYKVGVVRQAESAALKAAGLTESGKKSGTFKRELVAVFTQ 107
            QQV DLK +HP VLL++E GYR RFFG+DA TAA+VL IYAHVNHNF  ASVP+FRL VH+RRLV AGYKVGVV+Q E+AA+KA G      + G F R L A++T+
Sbjct:   97 QQVVDLKKKHPDVLLMIEVGYRFRFFGDDAETAARVLGIYAHVNHNFATASVPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHG----PGRIGPFGRGLSALYTK 199          
BLAST of mRNA_H-elongata_contig146244.3152.1 vs. uniprot
Match: A0A388JNR2_CHABU (MutS_I domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388JNR2_CHABU)

HSP 1 Score: 131 bits (330), Expect = 2.030e-33
Identity = 66/107 (61.68%), Postives = 86/107 (80.37%), Query Frame = 0
Query:    1 QQVSDLKARHPGVLLLVECGYRLRFFGEDALTAAKVLRIYAHVNHNFHVASVPSFRLAVHLRRLVDAGYKVGVVRQAESAALKAAGLTESGKKSGTFKRELVAVFTQ 107
            QQV +L++++P VLL+VE GY+ RFFGEDA TAA+VL IY+HV+HNF  AS+P+FRL VH+RRLV+AGYKVGVVRQ E+AA+KA G      K G F R+L A++T+
Sbjct:  474 QQVLELRSQYPDVLLMVEVGYKYRFFGEDAETAARVLGIYSHVDHNFVTASIPTFRLHVHVRRLVEAGYKVGVVRQTETAAIKAHG----ANKGGPFSRQLSALYTR 576          
BLAST of mRNA_H-elongata_contig146244.3152.1 vs. uniprot
Match: A0A1S3X367_TOBAC (DNA mismatch repair protein MSH3-like n=1 Tax=Nicotiana tabacum TaxID=4097 RepID=A0A1S3X367_TOBAC)

HSP 1 Score: 129 bits (323), Expect = 3.660e-33
Identity = 65/107 (60.75%), Postives = 85/107 (79.44%), Query Frame = 0
Query:    1 QQVSDLKARHPGVLLLVECGYRLRFFGEDALTAAKVLRIYAHVNHNFHVASVPSFRLAVHLRRLVDAGYKVGVVRQAESAALKAAGLTESGKKSGTFKRELVAVFTQ 107
            QQV +LKA++P +LL++E GY+ RFFG+DA  AA+VL IYAH++HNF  ASVP+FRL VH+RRLV+AGYKVGVV+Q E+AA+KA G      K G F REL A++T+
Sbjct:  121 QQVVELKAKYPDILLMIEVGYKYRFFGQDAENAARVLGIYAHMDHNFLTASVPTFRLNVHVRRLVNAGYKVGVVKQTETAAIKAHG----SNKLGPFGRELSALYTK 223          
BLAST of mRNA_H-elongata_contig146244.3152.1 vs. uniprot
Match: A0A6P5TVC9_PRUAV (DNA mismatch repair protein MSH3-like n=1 Tax=Prunus avium TaxID=42229 RepID=A0A6P5TVC9_PRUAV)

HSP 1 Score: 128 bits (321), Expect = 8.080e-33
Identity = 67/107 (62.62%), Postives = 83/107 (77.57%), Query Frame = 0
Query:    1 QQVSDLKARHPGVLLLVECGYRLRFFGEDALTAAKVLRIYAHVNHNFHVASVPSFRLAVHLRRLVDAGYKVGVVRQAESAALKAAGLTESGKKSGTFKRELVAVFTQ 107
            QQV DLK R+P VLL+VE GY+ RFFG+DA  AA+VL IYAH++HNF  ASVP+FRL VH+RRLV AGYKVGVV+Q E+AA+KA G      +SG F R L A++T+
Sbjct:  129 QQVVDLKKRYPDVLLMVEVGYKYRFFGQDAEIAARVLGIYAHMDHNFLTASVPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHG----SNRSGPFGRGLSALYTK 231          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig146244.3152.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYL3_ECTSI1.010e-5388.79MutS protein homolog 3 n=1 Tax=Ectocarpus siliculo... [more]
A0A4D9D7L2_9STRA3.410e-4268.22MutS_I domain-containing protein n=1 Tax=Nannochlo... [more]
W7TSS8_9STRA2.720e-4168.22Dna mismatch repair protein msh3 (Fragment) n=1 Ta... [more]
A0A2P5CUR2_PARAD1.740e-3463.55DNA mismatch repair n=2 Tax=Cannabaceae TaxID=3481... [more]
A0A0V0HD09_SOLCH9.550e-3459.81Putative ovule protein (Fragment) n=1 Tax=Solanum ... [more]
A0A5B7BU35_DAVIN1.130e-3361.68MutS_I domain-containing protein (Fragment) n=1 Ta... [more]
A0A5C7INN3_9ROSI1.210e-3364.49DNA_MISMATCH_REPAIR_2 domain-containing protein n=... [more]
A0A388JNR2_CHABU2.030e-3361.68MutS_I domain-containing protein n=1 Tax=Chara bra... [more]
A0A1S3X367_TOBAC3.660e-3360.75DNA mismatch repair protein MSH3-like n=1 Tax=Nico... [more]
A0A6P5TVC9_PRUAV8.080e-3362.62DNA mismatch repair protein MSH3-like n=1 Tax=Prun... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016151DNA mismatch repair protein MutS, N-terminalGENE3D3.40.1170.10coord: 1..107
e-value: 3.8E-36
score: 125.8
IPR016151DNA mismatch repair protein MutS, N-terminalSUPERFAMILY55271DNA repair protein MutS, domain Icoord: 1..106
IPR007695DNA mismatch repair protein MutS-like, N-terminalPFAMPF01624MutS_Icoord: 1..107
e-value: 2.5E-22
score: 79.2
NoneNo IPR availablePANTHERPTHR11361DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBERcoord: 1..107
NoneNo IPR availablePANTHERPTHR11361:SF122DNA MISMATCH REPAIR PROTEIN MSH3coord: 1..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig146244contigH-elongata_contig146244:622..1634 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig146244.3152.1mRNA_H-elongata_contig146244.3152.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig146244 622..1634 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig146244.3152.1 ID=prot_H-elongata_contig146244.3152.1|Name=mRNA_H-elongata_contig146244.3152.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=107bp
QQVSDLKARHPGVLLLVECGYRLRFFGEDALTAAKVLRIYAHVNHNFHVA
SVPSFRLAVHLRRLVDAGYKVGVVRQAESAALKAAGLTESGKKSGTFKRE
LVAVFTQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016151DNA_mismatch_repair_MutS_N
IPR007695DNA_mismatch_repair_MutS-lik_N