prot_H-elongata_contig145956.3138.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig145956.3138.1
Unique Nameprot_H-elongata_contig145956.3138.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length52
Homology
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BLAST of mRNA_H-elongata_contig145956.3138.1 vs. uniprot
Match: A0A6H5K1Z1_9PHAE (DHHA2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K1Z1_9PHAE)

HSP 1 Score: 67.8 bits (164), Expect = 6.270e-12
Identity = 31/51 (60.78%), Postives = 42/51 (82.35%), Query Frame = 0 
Query:    1 RDIAFDVHEGVGRPLVGSCCTLVAERMLERASHLLSPDVARLLLGVVKYST 51
            R++AF+ ++G G+ LVGSCCT+VAERML++A  LLS DVA+LLLGV+   T
Sbjct:  278 RNVAFEANDGGGKALVGSCCTIVAERMLDQAPALLSSDVAQLLLGVILVDT 328
[Close]
BLAST of mRNA_H-elongata_contig145956.3138.1 vs. uniprot
Match: A0A067C251_SAPPC (DHHA2 domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C251_SAPPC)

HSP 1 Score: 47.4 bits (111), Expect = 9.960e-5
Identity = 28/51 (54.90%), Postives = 31/51 (60.78%), Query Frame = 0 
Query:    1 RDIAFDVHEGVGRPLVGSCCTLVAERMLERASHLLSPDVARLLLGVVKYST 51
            RDIAF+  +  GR LVGS CTLVAER L      L P  A LLLGV+   T
Sbjct:  152 RDIAFERTDAGGRALVGSACTLVAERSLS-----LEPLEATLLLGVIALDT 197
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig145956.3138.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K1Z1_9PHAE6.270e-1260.78DHHA2 domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A067C251_SAPPC9.960e-554.90DHHA2 domain-containing protein n=2 Tax=Saprolegni... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.1640.10coord: 4..52
e-value: 3.2E-5
score: 25.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig145956contigH-elongata_contig145956:99..254 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig145956.3138.1mRNA_H-elongata_contig145956.3138.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig145956 99..254 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig145956.3138.1 ID=prot_H-elongata_contig145956.3138.1|Name=mRNA_H-elongata_contig145956.3138.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=52bp
RDIAFDVHEGVGRPLVGSCCTLVAERMLERASHLLSPDVARLLLGVVKYS
TA
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