prot_H-elongata_contig145944.3137.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig145944.3137.1
Unique Nameprot_H-elongata_contig145944.3137.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length89
Homology
BLAST of mRNA_H-elongata_contig145944.3137.1 vs. uniprot
Match: A0A6H5L064_9PHAE (DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L064_9PHAE)

HSP 1 Score: 175 bits (444), Expect = 3.370e-52
Identity = 82/89 (92.13%), Postives = 85/89 (95.51%), Query Frame = 0
Query:    1 MDQLYHLQDYGGLKLLYITPEKFCRSPSMIRALQRLHSRGLLSRFVIDEAHCVSDWGHDFRPDYLNLGILRKEFPDVPIMALTATANQV 89
            MDQLY LQDYGGLKLLYITPEKFCRSPSM +ALQRLHS+GLLSRFVIDEAHCVSDWGHDFRPDYL LGILRK+FPDVPIMALTATAN V
Sbjct:  107 MDQLYRLQDYGGLKLLYITPEKFCRSPSMNKALQRLHSKGLLSRFVIDEAHCVSDWGHDFRPDYLKLGILRKDFPDVPIMALTATANTV 195          
BLAST of mRNA_H-elongata_contig145944.3137.1 vs. uniprot
Match: D7FR28_ECTSI (DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR28_ECTSI)

HSP 1 Score: 175 bits (444), Expect = 4.590e-49
Identity = 82/89 (92.13%), Postives = 85/89 (95.51%), Query Frame = 0
Query:    1 MDQLYHLQDYGGLKLLYITPEKFCRSPSMIRALQRLHSRGLLSRFVIDEAHCVSDWGHDFRPDYLNLGILRKEFPDVPIMALTATANQV 89
            MDQLY LQDYGGLKLLYITPEKFCRSPSM +ALQRLHS+GLLSRFVIDEAHCVSDWGHDFRPDYL LGILRK+FPDVPIMALTATAN V
Sbjct:  676 MDQLYRLQDYGGLKLLYITPEKFCRSPSMNKALQRLHSKGLLSRFVIDEAHCVSDWGHDFRPDYLKLGILRKDFPDVPIMALTATANTV 764          
BLAST of mRNA_H-elongata_contig145944.3137.1 vs. uniprot
Match: W7U038_9STRA (Dna helicase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U038_9STRA)

HSP 1 Score: 141 bits (355), Expect = 1.110e-40
Identity = 64/88 (72.73%), Postives = 74/88 (84.09%), Query Frame = 0
Query:    1 MDQLYHLQDYGGLKLLYITPEKFCRSPSMIRALQRLHSRGLLSRFVIDEAHCVSDWGHDFRPDYLNLGILRKEFPDVPIMALTATANQ 88
            MD+LYHL  +G LKLLYITPEKF RS +M++ LQRL  RGLL+RFVIDEAHC+S WGHDFRPDYL L  +R +FP +PIMALTATANQ
Sbjct:  100 MDRLYHLPAHGSLKLLYITPEKFARSDAMVKCLQRLKDRGLLARFVIDEAHCISQWGHDFRPDYLMLRSIRDKFPSIPIMALTATANQ 187          
BLAST of mRNA_H-elongata_contig145944.3137.1 vs. uniprot
Match: A0A4D9D6D9_9STRA (DNA helicase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6D9_9STRA)

HSP 1 Score: 141 bits (355), Expect = 4.610e-37
Identity = 64/88 (72.73%), Postives = 74/88 (84.09%), Query Frame = 0
Query:    1 MDQLYHLQDYGGLKLLYITPEKFCRSPSMIRALQRLHSRGLLSRFVIDEAHCVSDWGHDFRPDYLNLGILRKEFPDVPIMALTATANQ 88
            MD+LYHL  +G LKLLYITPEKF RS +M++ LQRL  RGLL+RFVIDEAHC+S WGHDFRPDYL L  +R +FP +PIMALTATANQ
Sbjct:  572 MDRLYHLPAHGSLKLLYITPEKFARSDAMVKCLQRLKDRGLLARFVIDEAHCISQWGHDFRPDYLMLRSIRDKFPSIPIMALTATANQ 659          
BLAST of mRNA_H-elongata_contig145944.3137.1 vs. uniprot
Match: A0A7S1XRC4_9STRA (DNA helicase (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XRC4_9STRA)

HSP 1 Score: 134 bits (336), Expect = 1.540e-35
Identity = 62/88 (70.45%), Postives = 72/88 (81.82%), Query Frame = 0
Query:    1 MDQLYHLQDYGGLKLLYITPEKFCRSPSMIRALQRLHSRGLLSRFVIDEAHCVSDWGHDFRPDYLNLGILRKEFPDVPIMALTATANQ 88
            M QLY L ++GG+KLLYITPEK   S S+ R LQRL  RGLLSRFV+DEAHC+S WGHDFRPDYL L  LR++FP VPIMALTATA++
Sbjct:  208 MTQLYQLPEHGGMKLLYITPEKLAHSESLNRVLQRLSERGLLSRFVVDEAHCMSQWGHDFRPDYLQLRTLRQKFPRVPIMALTATASE 295          
BLAST of mRNA_H-elongata_contig145944.3137.1 vs. uniprot
Match: A0A7S2URF3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2URF3_9STRA)

HSP 1 Score: 123 bits (309), Expect = 2.140e-34
Identity = 59/87 (67.82%), Postives = 74/87 (85.06%), Query Frame = 0
Query:    3 QLYHLQDYGGLKLLYITPEKFCRSPSMIRA-LQRLHSRGLLSRFVIDEAHCVSDWGHDFRPDYLNLGILRKEFPDVPIMALTATANQ 88
            +L+   D+GG+KL YITPEK  R+ SMIR+ LQ+L+ + LLSRFV+DEAHC+SDWGHDFRPDY  LG LR++FP+VPIMALTATAN+
Sbjct:    5 RLFATPDHGGVKLFYITPEKL-RASSMIRSILQKLYDQNLLSRFVVDEAHCLSDWGHDFRPDYNQLGGLRRDFPNVPIMALTATANE 90          
BLAST of mRNA_H-elongata_contig145944.3137.1 vs. uniprot
Match: A0A836CQM3_9STRA (DNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQM3_9STRA)

HSP 1 Score: 133 bits (335), Expect = 2.290e-34
Identity = 61/88 (69.32%), Postives = 75/88 (85.23%), Query Frame = 0
Query:    1 MDQLYHLQDYGGLKLLYITPEKFCRSPSMIRALQRLHSRGLLSRFVIDEAHCVSDWGHDFRPDYLNLGILRKEFPDVPIMALTATANQ 88
            MD+LY L  +GGLKLLYITPEK  +S ++ + L+RL+ RGLLSRFVIDEAHC+SDWGHDFRPDYL L  LR+++P VPIMALTATA++
Sbjct:  391 MDELYQLPPFGGLKLLYITPEKLDKSGAIKQVLRRLYERGLLSRFVIDEAHCLSDWGHDFRPDYLKLDSLRRDYPKVPIMALTATADK 478          
BLAST of mRNA_H-elongata_contig145944.3137.1 vs. uniprot
Match: A0A7S0KZB9_9STRA (DNA helicase (Fragment) n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A7S0KZB9_9STRA)

HSP 1 Score: 121 bits (303), Expect = 5.960e-32
Identity = 53/86 (61.63%), Postives = 70/86 (81.40%), Query Frame = 0
Query:    3 QLYHLQDYGGLKLLYITPEKFCRSPSMIRALQRLHSRGLLSRFVIDEAHCVSDWGHDFRPDYLNLGILRKEFPDVPIMALTATANQ 88
            +L+    +GG+KLLYITPEK   S  +   L+RL+ R L+SRFV+DEAHC+SDWGHDFRPDY  LG+LR+++P+VP+MALTATAN+
Sbjct:   21 RLFETTHHGGVKLLYITPEKLRHSGVIQNVLKRLYERQLISRFVVDEAHCLSDWGHDFRPDYNQLGVLRQQYPNVPLMALTATANE 106          
BLAST of mRNA_H-elongata_contig145944.3137.1 vs. uniprot
Match: A0A8J2SRI0_9STRA (DNA helicase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SRI0_9STRA)

HSP 1 Score: 124 bits (311), Expect = 3.960e-31
Identity = 60/89 (67.42%), Postives = 71/89 (79.78%), Query Frame = 0
Query:    2 DQLYHLQD---YGGLKLLYITPEKFCRSPSMIRALQRLHSRGLLSRFVIDEAHCVSDWGHDFRPDYLNLGILRKEFPDVPIMALTATAN 87
            D L  L+D   +G LK+LY+TPEKF RS +  RAL+ L +RGLLSRFV+DEAHCVS WGHDFRPDYL L  +R+EFP VPIMALTATA+
Sbjct:  501 DALARLRDLPAHGDLKVLYLTPEKFARSAAARRALEALRARGLLSRFVVDEAHCVSSWGHDFRPDYLELRRIRREFPSVPIMALTATAD 589          
BLAST of mRNA_H-elongata_contig145944.3137.1 vs. uniprot
Match: A0A1E7EUD2_9STRA (DNA helicase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EUD2_9STRA)

HSP 1 Score: 124 bits (310), Expect = 5.420e-31
Identity = 55/86 (63.95%), Postives = 70/86 (81.40%), Query Frame = 0
Query:    3 QLYHLQDYGGLKLLYITPEKFCRSPSMIRALQRLHSRGLLSRFVIDEAHCVSDWGHDFRPDYLNLGILRKEFPDVPIMALTATANQ 88
            QL     +GG+KLLY+TPEK   S  M   L+RL+++GL+SRFV+DEAHC+SDWGHDFRPDY  LG+LRK++P VP+MALTATAN+
Sbjct:  575 QLNQTTAHGGVKLLYLTPEKLRHSNQMQSILRRLYNKGLISRFVVDEAHCLSDWGHDFRPDYNQLGVLRKDYPGVPLMALTATANK 660          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig145944.3137.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L064_9PHAE3.370e-5292.13DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7FR28_ECTSI4.590e-4992.13DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
W7U038_9STRA1.110e-4072.73Dna helicase n=1 Tax=Nannochloropsis gaditana TaxI... [more]
A0A4D9D6D9_9STRA4.610e-3772.73DNA helicase n=1 Tax=Nannochloropsis salina CCMP17... [more]
A0A7S1XRC4_9STRA1.540e-3570.45DNA helicase (Fragment) n=1 Tax=Phaeomonas parva T... [more]
A0A7S2URF3_9STRA2.140e-3467.82Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A836CQM3_9STRA2.290e-3469.32DNA helicase n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A7S0KZB9_9STRA5.960e-3261.63DNA helicase (Fragment) n=1 Tax=Asterionellopsis g... [more]
A0A8J2SRI0_9STRA3.960e-3167.42DNA helicase n=1 Tax=Pelagomonas calceolata TaxID=... [more]
A0A1E7EUD2_9STRA5.420e-3163.95DNA helicase n=1 Tax=Fragilariopsis cylindrus CCMP... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 2..89
e-value: 5.4E-36
score: 125.8
NoneNo IPR availablePANTHERPTHR13710DNA HELICASE RECQ FAMILY MEMBERcoord: 9..87
NoneNo IPR availablePANTHERPTHR13710:SF128ATP-DEPENDENT DNA HELICASE Q-LIKE 4Acoord: 9..87
IPR002464DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved sitePROSITEPS00690DEAH_ATP_HELICASEcoord: 43..52
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 1..89
score: 13.338
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 9..87

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig145944contigH-elongata_contig145944:449..1479 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig145944.3137.1mRNA_H-elongata_contig145944.3137.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig145944 449..1494 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig145944.3137.1 ID=prot_H-elongata_contig145944.3137.1|Name=mRNA_H-elongata_contig145944.3137.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=89bp
MDQLYHLQDYGGLKLLYITPEKFCRSPSMIRALQRLHSRGLLSRFVIDEA
HCVSDWGHDFRPDYLNLGILRKEFPDVPIMALTATANQV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002464DNA/RNA_helicase_DEAH_CS
IPR014001Helicase_ATP-bd
IPR027417P-loop_NTPase