prot_H-elongata_contig145892.3136.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig145892.3136.1
Unique Nameprot_H-elongata_contig145892.3136.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length55
Homology
BLAST of mRNA_H-elongata_contig145892.3136.1 vs. uniprot
Match: E9HQM3_DAPPU (PC4 domain-containing protein (Fragment) n=2 Tax=Daphnia pulex TaxID=6669 RepID=E9HQM3_DAPPU)

HSP 1 Score: 55.5 bits (132), Expect = 5.910e-9
Identity = 24/45 (53.33%), Postives = 34/45 (75.56%), Query Frame = 0
Query:    9 VDVREYYAKDTGDFAPGKKGITLNSSQWSIMRSAVDAIDEMLEGL 53
            +D+REYY KD G   PGKKGI+LNS+QW+ ++S +  +DE LE +
Sbjct:   21 IDIREYYEKD-GKQLPGKKGISLNSTQWNKLKSIISEVDEALEAI 64          
BLAST of mRNA_H-elongata_contig145892.3136.1 vs. uniprot
Match: UPI001EDCD53F (RNA polymerase II transcriptional coactivator-like n=1 Tax=Daphnia pulex TaxID=6669 RepID=UPI001EDCD53F)

HSP 1 Score: 56.6 bits (135), Expect = 9.610e-9
Identity = 25/45 (55.56%), Postives = 34/45 (75.56%), Query Frame = 0
Query:    9 VDVREYYAKDTGDFAPGKKGITLNSSQWSIMRSAVDAIDEMLEGL 53
            +D+REYY KD G   PGKKGI+LNS+QWS ++S +  +DE LE +
Sbjct:   89 IDIREYYEKD-GKQLPGKKGISLNSTQWSKLKSIISEVDEALEAI 132          
BLAST of mRNA_H-elongata_contig145892.3136.1 vs. uniprot
Match: D8LDB6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDB6_ECTSI)

HSP 1 Score: 54.7 bits (130), Expect = 2.330e-7
Identity = 23/45 (51.11%), Postives = 32/45 (71.11%), Query Frame = 0
Query:    9 VDVREYYAKDTGDFAPGKKGITLNSSQWSIMRSAVDAIDEMLEGL 53
            VD+RE+Y K+  ++ PGKKG++LN SQW I+RSA   ID  +  L
Sbjct:  213 VDIREFYLKEAKEYRPGKKGMSLNPSQWEILRSAAGQIDANIRRL 257          
BLAST of mRNA_H-elongata_contig145892.3136.1 vs. uniprot
Match: A0A7R8VR66_TIMDO (Hypothetical protein n=8 Tax=Timema TaxID=61471 RepID=A0A7R8VR66_TIMDO)

HSP 1 Score: 51.6 bits (122), Expect = 6.110e-7
Identity = 22/43 (51.16%), Postives = 33/43 (76.74%), Query Frame = 0
Query:    9 VDVREYYAKDTGDFAPGKKGITLNSSQWSIMRSAVDAIDEMLE 51
            VD+REYY  D G+  PGKKGI+L++SQW  ++  VD +DE+++
Sbjct:   71 VDIREYYEAD-GELKPGKKGISLSTSQWHKLKDIVDEVDEVVK 112          
BLAST of mRNA_H-elongata_contig145892.3136.1 vs. uniprot
Match: A0A8J2LH46_9HEXA (Hypothetical protein n=1 Tax=Allacma fusca TaxID=39272 RepID=A0A8J2LH46_9HEXA)

HSP 1 Score: 50.4 bits (119), Expect = 2.200e-6
Identity = 22/48 (45.83%), Postives = 34/48 (70.83%), Query Frame = 0
Query:    2 ITNFDAKV--DVREYYAKDTGDFAPGKKGITLNSSQWSIMRSAVDAID 47
            + +F  KV  D+REYY    G+  PGKKGI+LN++QWS ++S ++ +D
Sbjct:   75 VRDFRGKVLIDIREYYTTADGEERPGKKGISLNATQWSKLKSLIEDVD 122          
BLAST of mRNA_H-elongata_contig145892.3136.1 vs. uniprot
Match: A0A067QUX2_ZOONE (Putative RNA polymerase II transcriptional coactivator n=1 Tax=Zootermopsis nevadensis TaxID=136037 RepID=A0A067QUX2_ZOONE)

HSP 1 Score: 49.3 bits (116), Expect = 5.140e-6
Identity = 20/43 (46.51%), Postives = 32/43 (74.42%), Query Frame = 0
Query:    9 VDVREYYAKDTGDFAPGKKGITLNSSQWSIMRSAVDAIDEMLE 51
            VD+REYY  D GD  PGKKGI+L+++QW  ++S +  +D+ ++
Sbjct:   74 VDIREYYEAD-GDLKPGKKGISLSTTQWQKLKSLISEVDDAVK 115          
BLAST of mRNA_H-elongata_contig145892.3136.1 vs. uniprot
Match: A0A166XCD3_9AGAM (PC4-domain-containing protein n=1 Tax=Fibularhizoctonia sp. CBS 109695 TaxID=436010 RepID=A0A166XCD3_9AGAM)

HSP 1 Score: 50.1 bits (118), Expect = 5.630e-6
Identity = 22/46 (47.83%), Postives = 33/46 (71.74%), Query Frame = 0
Query:    9 VDVREYYAKDTGDFAPGKKGITLNSSQWSIMRSAVDAIDEMLEGLR 54
            +D+RE+Y KD G   PGKKGI+L+S QW++++    AID M E ++
Sbjct:  122 LDIREFYEKD-GKELPGKKGISLSSEQWALLKDNTAAIDSMFEEIK 166          
BLAST of mRNA_H-elongata_contig145892.3136.1 vs. uniprot
Match: D7FR01_ECTSI (PC4 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FR01_ECTSI)

HSP 1 Score: 48.9 bits (115), Expect = 8.690e-6
Identity = 21/45 (46.67%), Postives = 32/45 (71.11%), Query Frame = 0
Query:    9 VDVREYYAKDTGDFAPGKKGITLNSSQWSIMRSAVDAIDEMLEGL 53
            VD+REYY KD G+  PGKKGI+L++  W +++  +D I+  +E L
Sbjct:   83 VDIREYYEKD-GEMRPGKKGISLSTEHWEVLKENMDDINAKVEEL 126          
BLAST of mRNA_H-elongata_contig145892.3136.1 vs. uniprot
Match: A0A2B4T1L8_STYPI (Coiled-coil domain-containing protein 15 n=3 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4T1L8_STYPI)

HSP 1 Score: 48.1 bits (113), Expect = 6.100e-5
Identity = 19/46 (41.30%), Postives = 31/46 (67.39%), Query Frame = 0
Query:    9 VDVREYYAKDTGDFAPGKKGITLNSSQWSIMRSAVDAIDEMLEGLR 54
            VD+RE+Y  + G+  PG+KGI+L  SQW  ++S +  ID  +E ++
Sbjct:   77 VDIREFYEDNEGEMKPGRKGISLQLSQWEALKSHITDIDVAIEEMK 122          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig145892.3136.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
E9HQM3_DAPPU5.910e-953.33PC4 domain-containing protein (Fragment) n=2 Tax=D... [more]
UPI001EDCD53F9.610e-955.56RNA polymerase II transcriptional coactivator-like... [more]
D8LDB6_ECTSI2.330e-751.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7R8VR66_TIMDO6.110e-751.16Hypothetical protein n=8 Tax=Timema TaxID=61471 Re... [more]
A0A8J2LH46_9HEXA2.200e-645.83Hypothetical protein n=1 Tax=Allacma fusca TaxID=3... [more]
A0A067QUX2_ZOONE5.140e-646.51Putative RNA polymerase II transcriptional coactiv... [more]
A0A166XCD3_9AGAM5.630e-647.83PC4-domain-containing protein n=1 Tax=Fibularhizoc... [more]
D7FR01_ECTSI8.690e-646.67PC4 domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A2B4T1L8_STYPI6.100e-541.30Coiled-coil domain-containing protein 15 n=3 Tax=S... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003173Transcriptional coactivator p15 (PC4)PFAMPF02229PC4coord: 7..41
e-value: 1.4E-12
score: 47.0
IPR009044ssDNA-binding transcriptional regulatorGENE3D2.30.31.10coord: 3..53
e-value: 1.3E-14
score: 55.4
IPR009044ssDNA-binding transcriptional regulatorSUPERFAMILY54447ssDNA-binding transcriptional regulator domaincoord: 8..52
NoneNo IPR availablePANTHERPTHR13215:SF0ACTIVATED RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR P15coord: 9..51
NoneNo IPR availablePANTHERPTHR13215RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATORcoord: 9..51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig145892contigH-elongata_contig145892:14..178 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig145892.3136.1mRNA_H-elongata_contig145892.3136.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig145892 14..178 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig145892.3136.1 ID=prot_H-elongata_contig145892.3136.1|Name=mRNA_H-elongata_contig145892.3136.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=55bp
PITNFDAKVDVREYYAKDTGDFAPGKKGITLNSSQWSIMRSAVDAIDEML
EGLR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003173PC4
IPR009044ssDNA-bd_transcriptional_reg