prot_H-elongata_contig145341.3104.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig145341.3104.1
Unique Nameprot_H-elongata_contig145341.3104.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length202
Homology
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BLAST of mRNA_H-elongata_contig145341.3104.1 vs. uniprot
Match: D8LPQ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPQ7_ECTSI)

HSP 1 Score: 58.5 bits (140), Expect = 1.540e-6
Identity = 32/52 (61.54%), Postives = 39/52 (75.00%), Query Frame = 0 
Query:    1 ASNLSPVCVSRRLLSLAAYHRVVLARQGGDRVKAGLTFVVEDEDEDGESDQE 52
            A+NL+PVCVSR+LLS  AY R+ LARQ GD V+AGLTF    E E+G  D+E
Sbjct: 1488 AANLAPVCVSRQLLSEGAYRRLALARQAGDDVEAGLTF----EPEEGYDDEE 1535
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BLAST of mRNA_H-elongata_contig145341.3104.1 vs. uniprot
Match: A0A6H5LNS9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LNS9_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 2.080e-6
Identity = 42/88 (47.73%), Postives = 50/88 (56.82%), Query Frame = 0 
Query:    1 ASNLSPVCVSRRLLSLAAYHRVVLARQGGDRVKAGLTFVVE----DEDEDGES------DQEGGQADDAVAAIATAGKTVDSDGQDHG 78
            A+NL+PVCVSR+LLS  AY R+ LARQ GD V+AGLTF  E    DE E G        +Q G  A  A+   AT       DG D+G
Sbjct: 1450 AANLAPVCVSRQLLSEGAYRRLALARQAGDDVEAGLTFEPEEGYDDEKERGAGADVKPKEQGGVNAGTAMGKGATPASGTGMDGGDNG 1537
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig145341.3104.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LPQ7_ECTSI1.540e-661.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LNS9_9PHAE2.080e-647.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig145341contigH-elongata_contig145341:149..1463 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig145341.3104.1mRNA_H-elongata_contig145341.3104.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig145341 149..1463 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig145341.3104.1 ID=prot_H-elongata_contig145341.3104.1|Name=mRNA_H-elongata_contig145341.3104.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=202bp
ASNLSPVCVSRRLLSLAAYHRVVLARQGGDRVKAGLTFVVEDEDEDGESD
QEGGQADDAVAAIATAGKTVDSDGQDHGEDLAATGQRMADFLLGGGGVNG
SGGAPQPAQDEEDDLYDDLYGGLTDETGHEASVKGSGKGRGDGDGDGGLD
SGGGDQDTGALSEGGTAAEGGKASRDTEAGTGKGVGGVAEDIGTRAVMNA
LK
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