prot_H-elongata_contig145111.3090.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig145111.3090.1
Unique Nameprot_H-elongata_contig145111.3090.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length87
Homology
BLAST of mRNA_H-elongata_contig145111.3090.1 vs. uniprot
Match: D7G9I1_ECTSI (Cyclopropane-fatty-acyl-phospholipid synthase/ oxidoreductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9I1_ECTSI)

HSP 1 Score: 72.4 bits (176), Expect = 6.430e-13
Identity = 34/48 (70.83%), Postives = 39/48 (81.25%), Query Frame = 0
Query:    1 MPKRRGAWSAWNYLGRSTEMAAAEAEVASRGRTADVKPVYVTYWLNKV 48
            MPKRR AWSAWNYLG+STE+AAA    A+RG  AD KP +VTYWLNK+
Sbjct:  406 MPKRRAAWSAWNYLGKSTEIAAA----AARGHAADTKPAFVTYWLNKL 449          
BLAST of mRNA_H-elongata_contig145111.3090.1 vs. uniprot
Match: A0A6H5K6Z7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6Z7_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 8.600e-13
Identity = 34/47 (72.34%), Postives = 38/47 (80.85%), Query Frame = 0
Query:    1 MPKRRGAWSAWNYLGRSTEMAAAEAEVASRGRTADVKPVYVTYWLNK 47
            MPKRR AWSAWNYLG+STE+AAA    A+RG  AD KP +VTYWLNK
Sbjct:    1 MPKRRAAWSAWNYLGKSTEIAAA----AARGHAADTKPAFVTYWLNK 43          
BLAST of mRNA_H-elongata_contig145111.3090.1 vs. uniprot
Match: A0A835ZDJ8_9STRA (Mycolic acid cyclopropane synthetase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDJ8_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 2.280e-7
Identity = 38/90 (42.22%), Postives = 48/90 (53.33%), Query Frame = 0
Query:    1 MPKRRGAWSAWNYLGRSTEMAAAEAEVASRGRTADVKPVYVTYWLNKVLR------VVLSLLENVDKPGSPQSRQRLAYQTSHNAAFAQG 84
            MP+RR AWSAWNY+G S       A+ A+RG     KPVYVTYWLNK+        V +SL  N   P  P    R+  +T+H     +G
Sbjct:   90 MPRRRAAWSAWNYMGDS-------ADAAARGG-GGAKPVYVTYWLNKLQNLDCRDSVFVSL--NPSAPPDPAKTHRVI-ETTHPQFTPEG 168          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig145111.3090.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G9I1_ECTSI6.430e-1370.83Cyclopropane-fatty-acyl-phospholipid synthase/ oxi... [more]
A0A6H5K6Z7_9PHAE8.600e-1372.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZDJ8_9STRA2.280e-742.22Mycolic acid cyclopropane synthetase-domain-contai... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig145111contigH-elongata_contig145111:897..1157 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig145111.3090.1mRNA_H-elongata_contig145111.3090.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig145111 897..1172 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig145111.3090.1 ID=prot_H-elongata_contig145111.3090.1|Name=mRNA_H-elongata_contig145111.3090.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=87bp
MPKRRGAWSAWNYLGRSTEMAAAEAEVASRGRTADVKPVYVTYWLNKVLR
VVLSLLENVDKPGSPQSRQRLAYQTSHNAAFAQGVP*
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