prot_H-elongata_contig144815.3077.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig144815.3077.1
Unique Nameprot_H-elongata_contig144815.3077.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length69
Homology
BLAST of mRNA_H-elongata_contig144815.3077.1 vs. uniprot
Match: A0A6H5JJ74_9PHAE (TOG domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ74_9PHAE)

HSP 1 Score: 135 bits (339), Expect = 2.840e-35
Identity = 65/68 (95.59%), Postives = 66/68 (97.06%), Query Frame = 0
Query:    1 MSVALGVTRILQYVLQGLFHPARRVREVYWKLYNSLYILGADALTPAYPRLMDDGANTYRRTYLELFV 68
            MSVALGVTRILQYVLQGLFHPARRVREVYWKLYNSLYILGADALTPAYPRL DDG NTYRRT+LELFV
Sbjct: 1309 MSVALGVTRILQYVLQGLFHPARRVREVYWKLYNSLYILGADALTPAYPRLTDDGNNTYRRTHLELFV 1376          
BLAST of mRNA_H-elongata_contig144815.3077.1 vs. uniprot
Match: D7FI13_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI13_ECTSI)

HSP 1 Score: 133 bits (334), Expect = 5.480e-35
Identity = 64/68 (94.12%), Postives = 65/68 (95.59%), Query Frame = 0
Query:    1 MSVALGVTRILQYVLQGLFHPARRVREVYWKLYNSLYILGADALTPAYPRLMDDGANTYRRTYLELFV 68
            MSVALGVTRILQYVLQGLFHPARRVREVYWKLYNSLYILGADALTPAYPRL DDG N YRRT+LELFV
Sbjct:  492 MSVALGVTRILQYVLQGLFHPARRVREVYWKLYNSLYILGADALTPAYPRLTDDGNNAYRRTHLELFV 559          
BLAST of mRNA_H-elongata_contig144815.3077.1 vs. uniprot
Match: A0A6V1S7R5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1S7R5_HETAK)

HSP 1 Score: 124 bits (310), Expect = 2.320e-31
Identity = 56/67 (83.58%), Postives = 64/67 (95.52%), Query Frame = 0
Query:    2 SVALGVTRILQYVLQGLFHPARRVREVYWKLYNSLYILGADALTPAYPRLMDDGANTYRRTYLELFV 68
            +VALG TR+LQYVLQG++HPARRVR+VYWK+YNSLYI GADALTPAYPRL D+GANTYRRT+LELFV
Sbjct:  829 AVALGPTRVLQYVLQGMYHPARRVRDVYWKIYNSLYIYGADALTPAYPRLEDEGANTYRRTHLELFV 895          
BLAST of mRNA_H-elongata_contig144815.3077.1 vs. uniprot
Match: A0A7S2XY64_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XY64_9STRA)

HSP 1 Score: 119 bits (299), Expect = 4.170e-31
Identity = 53/66 (80.30%), Postives = 62/66 (93.94%), Query Frame = 0
Query:    3 VALGVTRILQYVLQGLFHPARRVREVYWKLYNSLYILGADALTPAYPRLMDDGANTYRRTYLELFV 68
            VALG T+ILQYV+QGL+HPARRVR+VYWK+YN+LY+ GADALTPAYPRL DDG NTYRRT+LELF+
Sbjct:  279 VALGPTKILQYVMQGLYHPARRVRDVYWKIYNTLYMFGADALTPAYPRLEDDGLNTYRRTHLELFI 344          
BLAST of mRNA_H-elongata_contig144815.3077.1 vs. uniprot
Match: A0A1Z9QC94_9BACT (TOG domain-containing protein n=1 Tax=Phycisphaeraceae bacterium TMED231 TaxID=1986831 RepID=A0A1Z9QC94_9BACT)

HSP 1 Score: 117 bits (293), Expect = 4.620e-29
Identity = 55/68 (80.88%), Postives = 61/68 (89.71%), Query Frame = 0
Query:    1 MSVALGVTRILQYVLQGLFHPARRVREVYWKLYNSLYILGADALTPAYPRLMDDGANTYRRTYLELFV 68
            M VALG  +ILQYVLQGL+HPARRVR+VYWKLYN++YI GADALT AYPRL DDG NTYRRT+LELFV
Sbjct: 1206 MIVALGPIKILQYVLQGLYHPARRVRDVYWKLYNTIYIYGADALTCAYPRLEDDGVNTYRRTHLELFV 1273          
BLAST of mRNA_H-elongata_contig144815.3077.1 vs. uniprot
Match: A0A7S3GVU2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GVU2_9STRA)

HSP 1 Score: 115 bits (289), Expect = 5.440e-29
Identity = 51/68 (75.00%), Postives = 59/68 (86.76%), Query Frame = 0
Query:    1 MSVALGVTRILQYVLQGLFHPARRVREVYWKLYNSLYILGADALTPAYPRLMDDGANTYRRTYLELFV 68
            M VALG  ++ QYV+QGLFHPAR+VREVYWK+YNS+YI G DALTPAYPRL DDG N YRRT+LELF+
Sbjct:  389 MIVALGPAKLFQYVMQGLFHPARKVREVYWKIYNSMYIYGQDALTPAYPRLEDDGVNNYRRTHLELFI 456          
BLAST of mRNA_H-elongata_contig144815.3077.1 vs. uniprot
Match: A0A7S3GVL6_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GVL6_9STRA)

HSP 1 Score: 115 bits (289), Expect = 1.600e-28
Identity = 51/68 (75.00%), Postives = 59/68 (86.76%), Query Frame = 0
Query:    1 MSVALGVTRILQYVLQGLFHPARRVREVYWKLYNSLYILGADALTPAYPRLMDDGANTYRRTYLELFV 68
            M VALG  ++ QYV+QGLFHPAR+VREVYWK+YNS+YI G DALTPAYPRL DDG N YRRT+LELF+
Sbjct: 1139 MIVALGPAKLFQYVMQGLFHPARKVREVYWKIYNSMYIYGQDALTPAYPRLEDDGVNNYRRTHLELFI 1206          
BLAST of mRNA_H-elongata_contig144815.3077.1 vs. uniprot
Match: A0A2P4YHC9_9STRA (Splicing factor 3B subunit 1 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YHC9_9STRA)

HSP 1 Score: 106 bits (264), Expect = 1.590e-27
Identity = 50/66 (75.76%), Postives = 54/66 (81.82%), Query Frame = 0
Query:    3 VALGVTRILQYVLQGLFHPARRVREVYWKLYNSLYILGADALTPAYPRLMDDGANTYRRTYLELFV 68
            VALG   ILQYVLQGLFHPARRVREVYWK+YNSLY+   D LTPAYP L DDG N+Y RTYLEL +
Sbjct:  107 VALGPHVILQYVLQGLFHPARRVREVYWKIYNSLYMYAQDGLTPAYPALDDDGVNSYNRTYLELCI 172          
BLAST of mRNA_H-elongata_contig144815.3077.1 vs. uniprot
Match: A0A813AG85_9DINO (SF3B1 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813AG85_9DINO)

HSP 1 Score: 111 bits (278), Expect = 3.830e-27
Identity = 50/68 (73.53%), Postives = 58/68 (85.29%), Query Frame = 0
Query:    1 MSVALGVTRILQYVLQGLFHPARRVREVYWKLYNSLYILGADALTPAYPRLMDDGANTYRRTYLELFV 68
            M V+LGV R+L YVLQGLFHPARR+REVYWKLYN+LY+ G DA+TP  PRL +DG NTY+RTYLEL V
Sbjct:  498 MRVSLGVHRVLLYVLQGLFHPARRIREVYWKLYNNLYVYGGDAMTPVLPRLENDGLNTYKRTYLELVV 565          
BLAST of mRNA_H-elongata_contig144815.3077.1 vs. uniprot
Match: A0A196SCZ9_BLAHN (Splicing factor 3B subunit 1 n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SCZ9_BLAHN)

HSP 1 Score: 110 bits (276), Expect = 7.130e-27
Identity = 50/66 (75.76%), Postives = 57/66 (86.36%), Query Frame = 0
Query:    3 VALGVTRILQYVLQGLFHPARRVREVYWKLYNSLYILGADALTPAYPRLMDDGANTYRRTYLELFV 68
            +ALG   +L YVLQGLFHPARRVREVYWK+YN+LYI GADALT AYPRL DDG NTYRR Y+E+F+
Sbjct:  496 LALGPPVVLMYVLQGLFHPARRVREVYWKIYNNLYIYGADALTMAYPRLEDDGVNTYRREYIEMFI 561          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig144815.3077.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJ74_9PHAE2.840e-3595.59TOG domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FI13_ECTSI5.480e-3594.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6V1S7R5_HETAK2.320e-3183.58Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2XY64_9STRA4.170e-3180.30Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A1Z9QC94_9BACT4.620e-2980.88TOG domain-containing protein n=1 Tax=Phycisphaera... [more]
A0A7S3GVU2_9STRA5.440e-2975.00Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S3GVL6_9STRA1.600e-2875.00Hypothetical protein n=2 Tax=Spumella elongata Tax... [more]
A0A2P4YHC9_9STRA1.590e-2775.76Splicing factor 3B subunit 1 n=1 Tax=Phytophthora ... [more]
A0A813AG85_9DINO3.830e-2773.53SF3B1 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2... [more]
A0A196SCZ9_BLAHN7.130e-2775.76Splicing factor 3B subunit 1 n=1 Tax=Blastocystis ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038737Splicing factor 3B subunit 1-likePANTHERPTHR12097SPLICING FACTOR 3B, SUBUNIT 1-RELATEDcoord: 1..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig144815contigH-elongata_contig144815:584..790 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig144815.3077.1mRNA_H-elongata_contig144815.3077.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig144815 351..1491 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig144815.3077.1 ID=prot_H-elongata_contig144815.3077.1|Name=mRNA_H-elongata_contig144815.3077.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=69bp
MSVALGVTRILQYVLQGLFHPARRVREVYWKLYNSLYILGADALTPAYPR
LMDDGANTYRRTYLELFV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038737SF3b_su1-like