prot_H-elongata_contig144655.3068.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig144655.3068.1
Unique Nameprot_H-elongata_contig144655.3068.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length109
Homology
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BLAST of mRNA_H-elongata_contig144655.3068.1 vs. uniprot
Match: D8LAZ1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAZ1_ECTSI)

HSP 1 Score: 161 bits (408), Expect = 7.570e-44
Identity = 87/113 (76.99%), Postives = 94/113 (83.19%), Query Frame = 0 
Query:    1 MRFRERVNGGRLRSLVLETQLYIFARQCALNLELKKPAEVARMGGRFMPAYYHELIGQAEDQRD----EWGRDFDEEVTEGEASTTIPGALDPAEVELFALKSSWDVVKACDR 109
            MRFRER+NG  L SLVLETQLYIFARQCALNLELKKPAEVARMGGRFMPAYYHEL+GQA D ++      G DFDE  +EG  S++   ALDPAEVELFALKSSWDVVKACDR
Sbjct:  502 MRFRERLNGDGLHSLVLETQLYIFARQCALNLELKKPAEVARMGGRFMPAYYHELVGQAADLQEGGGXXXGGDFDEGASEGGKSSSST-ALDPAEVELFALKSSWDVVKACDR 613
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BLAST of mRNA_H-elongata_contig144655.3068.1 vs. uniprot
Match: A0A835YQQ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQQ4_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 1.520e-12
Identity = 43/109 (39.45%), Postives = 59/109 (54.13%), Query Frame = 0 
Query:    1 MRFRERVNGGRLRSLVLETQLYIFARQCALNLELKKPAEVARMGGRFMPAYYHELIGQAEDQRDEWGRDFDEEVTEGEASTTIPGALDPAEVELFALKSSWDVVKACDR 109
            M+ R+RV  G L S VL+TQLYIFARQC L L++ +P E+A+ G  F+ A++ EL+ +   +                           A VEL+ LK+ WDVVKAC R
Sbjct:  557 MKLRQRVYPGSLFSFVLDTQLYIFARQCHLYLDMGRPDELAKCGIAFIRAFHQELLAKLYSET--------------------------ARVELWGLKACWDVVKACSR 639
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig144655.3068.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LAZ1_ECTSI7.570e-4476.99Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YQQ4_9STRA1.520e-1239.45Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig144655contigH-elongata_contig144655:203..1312 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig144655.3068.1mRNA_H-elongata_contig144655.3068.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig144655 203..1336 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig144655.3068.1 ID=prot_H-elongata_contig144655.3068.1|Name=mRNA_H-elongata_contig144655.3068.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=109bp
MRFRERVNGGRLRSLVLETQLYIFARQCALNLELKKPAEVARMGGRFMPA
YYHELIGQAEDQRDEWGRDFDEEVTEGEASTTIPGALDPAEVELFALKSS
WDVVKACDR
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