prot_H-elongata_contig14464.3066.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig14464.3066.1
Unique Nameprot_H-elongata_contig14464.3066.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length219
Homology
BLAST of mRNA_H-elongata_contig14464.3066.1 vs. uniprot
Match: D8LS95_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS95_ECTSI)

HSP 1 Score: 313 bits (801), Expect = 1.210e-104
Identity = 154/217 (70.97%), Postives = 178/217 (82.03%), Query Frame = 0
Query:    1 MTFAVAYSAKLPRWEFSRCMALMDVFVFMTELARLRIESVNRVVFGIFRPFMRAHELRKFSGIMYCLAGLGLTSALFPKHIALLGMVQLAVGDPTAALCGHATRSVRWSRLRSGKGLLGALGCAVVLTLANFVTLYKAVFEEAPPPVERILLAAALIATWTAAVEASVPSPQKTLRYDGFPLAFDDNATLPVLGALGAAMVFRLLGLEDCQLRPWVF 217
            M FAV YSAKLP+ +F+R MA +D  V   ELARLR++ VNRV+F +F  FMRAHEL+KFSGIMYCLAGLG+TSA+FPKHIALLGM+QLA+GDP AALCGHATRSV WSR+ +GKGLLGALGCA  LTLAN   L KA FE   P + RI+LA  +IA W AAVE SVPSPQKTL  +GFPLAFDDNA LPVLGA+GAA+VFR+LGL  C+LRPW+F
Sbjct:   86 MAFAVVYSAKLPQRDFARGMAALDACVLAGELARLRVDVVNRVLFRVFGAFMRAHELKKFSGIMYCLAGLGITSAMFPKHIALLGMLQLALGDPVAALCGHATRSVGWSRVGTGKGLLGALGCATALTLANSFVLAKARFESGAPTLRRIVLAGGMIAAWAAAVEVSVPSPQKTLPCEGFPLAFDDNAALPVLGAMGAAVVFRVLGLGSCELRPWLF 302          
BLAST of mRNA_H-elongata_contig14464.3066.1 vs. uniprot
Match: A0A6U5JUM7_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A6U5JUM7_9STRA)

HSP 1 Score: 106 bits (264), Expect = 2.390e-23
Identity = 76/225 (33.78%), Postives = 109/225 (48.44%), Query Frame = 0
Query:   11 LPRWEFSRCMALMDVFVFMTELARLR--IESVNRVVFGIFRPFMRAHELR-KFSGIMYCLAGLGLTSALFPKHIALLGMVQLAVGDPTAALCGHATRSVRWSRLRSG-------KGLLGALGCAVVLTLANFVTLYKAVFEEAPPPVERILLAAALIATWTAA-VEASVPSPQKTLRYDGF-----PLAFDDNATLPVLGALGAAMVFRLLGLE-DCQLRPWVFV 218
            +PR  F   M ++       EL R R     +N  +  I    +R HE+  KF+G +Y   G+ +TSALF K  A LG+ QLA+ DP+A+  G +TR V WSR+ SG       KG LG LG A+     N+  L  A F +  P  ++ LL A+L      A  + +VP+P   +    F     P   DDN  +P+     A  +F+ L    D  L P+VF+
Sbjct:  184 VPRKYFLGAMTILSTGTLCMELLRYRPGFSWMNDALHTILGGSLRRHEMDGKFTGSLYFFVGVTVTSALFSKAAATLGIFQLAIADPSASYFGRSTRHVYWSRIESGLGGFGRNKGFLGFLGGALACVPLNYQVLRMAQFGKIVPGGQQALLTASLALGMAGAFADLAVPTPALVMPEKVFGVRVPPFHVDDNFVVPIFAGFAATHIFKALSCPTDFTLAPFVFI 408          
BLAST of mRNA_H-elongata_contig14464.3066.1 vs. uniprot
Match: A0A7S4AI34_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AI34_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 2.140e-19
Identity = 81/236 (34.32%), Postives = 115/236 (48.73%), Query Frame = 0
Query:   11 LPRWEFSRCMALMDVFVFMTELARLR--IESVNRVVFGIFRPFMRAHELR-KFSGIMYCLAGLGLTSALFPKHIALLGMVQLAVGDPTAALCGHATRSVRWSRLRSG-------KGLLGALGCAVVLTLANFVTLYKAVFEE---------APPPVERILLAAALIATWTAAVEASVPSPQKTL--RYDGF---PLAFDDNATLPVLGALGAAMVFRL----LGLEDCQLRPWVFV 218
            +PR  F   M  +     + EL R R   + +N+ +  +    +R +E+  KF+G +Y  +G+ LTS LFPK  A LG+VQLA+ DP+A+  G ATR V WSR+ +G       KG+LG LG AV     N+  L  A+ +          A P V  I LA  +     A  +  VP+P  TL  R  G    P   DDN  +PVL   G A V+ L    +G  +  L  ++ V
Sbjct:  243 IPRNRFLPGMTTLTTLTLIMELLRYRKGFDWMNKSLHFVLGKALRKNEMEGKFTGSLYYFSGVTLTSYLFPKSCATLGIVQLAIADPSASYFGRATRHVYWSRINNGFFGLGRNKGILGCLGGAVSCVPLNYRLLSLALVKNTGTAAARTIAKPTVLAISLALGMAG---ALADLMVPTPSLTLPKRVCGVRVPPFHLDDNIVVPVLS--GWACVYILAAASIGRNELVLAKYLVV 473          
BLAST of mRNA_H-elongata_contig14464.3066.1 vs. uniprot
Match: A0A7S4EJ41_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EJ41_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 2.860e-19
Identity = 81/236 (34.32%), Postives = 115/236 (48.73%), Query Frame = 0
Query:   11 LPRWEFSRCMALMDVFVFMTELARLR--IESVNRVVFGIFRPFMRAHELR-KFSGIMYCLAGLGLTSALFPKHIALLGMVQLAVGDPTAALCGHATRSVRWSRLRSG-------KGLLGALGCAVVLTLANFVTLYKAVFEE---------APPPVERILLAAALIATWTAAVEASVPSPQKTL--RYDGF---PLAFDDNATLPVLGALGAAMVFRL----LGLEDCQLRPWVFV 218
            +PR  F   M  +     + EL R R   + +N+ +  +    +R +E+  KF+G +Y  +G+ LTS LFPK  A LG+VQLA+ DP+A+  G ATR V WSR+ +G       KG+LG LG AV     N+  L  A+ +          A P V  I LA  +     A  +  VP+P  TL  R  G    P   DDN  +PVL   G A V+ L    +G  +  L  ++ V
Sbjct:  363 IPRNRFLPGMTTLTTLTLIMELLRYRKGFDWMNKSLHFVLGKALRKNEMEGKFTGSLYYFSGVTLTSYLFPKSCATLGIVQLAIADPSASYFGRATRHVYWSRINNGFFGLGRNKGILGCLGGAVSCVPLNYRLLSLALVKNTGTAAARTIAKPTVLAISLALGMAG---ALADLMVPTPSLTLPKRVCGVRVPPFHLDDNIVVPVLS--GWACVYILAAASIGRNELVLAKYLVV 593          
BLAST of mRNA_H-elongata_contig14464.3066.1 vs. uniprot
Match: K0R4U8_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R4U8_THAOC)

HSP 1 Score: 90.5 bits (223), Expect = 2.190e-18
Identity = 68/216 (31.48%), Postives = 105/216 (48.61%), Query Frame = 0
Query:   11 LPRWEFSRCMALMDVFVFMTELARLR--IESVNRVVFGIFRPFMRAHELR-KFSGIMYCLAGLGLTSALFPKHIALLGMVQLAVGDPTAALCGHATRSVRWSRLRSG-------KGLLGALGCAVVLTLANFVTLYKAVF--EEAPPPVERILLAAALIATWTAAVEASVPSP-----QKTLRYDGFPLAFDDNATLPVLGALGAAMVFRLLGLED 209
            +PR  F   MA++     + EL R R     +N V+       +R HE+  KF+G  Y  AG+  T+ L+P+  A LG++QLA+ DP+A+  G  TR+V WSR+ +G       KGLLG LG A+     NF     A +  +  P     +L A+ L+    A  + +VP+P     +K L     P   DDN  +P+        +F ++G + 
Sbjct:   35 IPRARFVPGMAVVTGTSLLMELLRYRSGFGWINGVLHFFLGKALRKHEMEGKFTGSFYYFAGVTATAYLYPQTAATLGILQLALADPSASYFGKMTRNVYWSRIENGLLGFGRNKGLLGFLGGALFCLPFNFRIFKMARWGAKGVPGGDSALLTASLLLGLAGAFADLAVPTPVLTMPKKVLGVPVPPFHVDDNFVVPIFSGWACVKIFDMMGWDS 250          
BLAST of mRNA_H-elongata_contig14464.3066.1 vs. uniprot
Match: A0A1E7F8F4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F8F4_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 5.710e-16
Identity = 72/232 (31.03%), Postives = 107/232 (46.12%), Query Frame = 0
Query:   11 LPRWEFSRCMALMDVFVFMTELARLR--IESVNRVVFGIFRPFMRAHELR-KFSGIMYCLAGLGLTSALFPKHIALLGMVQLAVGDPTAALCGHATRSVRWSRLRSG--------KGLLGALGCAV--------VLTLA-NFVTLYKAVFEEAPPPVER-------ILLAAALIATWTAAVEASVPSPQKTLRYDGF-----PLAFDDNATLPVLGALGAAMVFR-LLGLED 209
            LPR  F   M+ +       EL R R   + +N  +  +F   +R  E+  KF+G +Y  AG+  TS L+P+  A LG++QLA+ DPTA+  G ATR V WSR+  G        KG+LG LG  +        +L+LA N V    ++                 IL+A+ ++    A  +  VP+P  TL          P   DDN  +PVL       +F+ +LG+  
Sbjct:   36 LPRSTFLPIMSTLTAITLFMELMRYREGFQWINTSMHYLFGKSLRKSEMDGKFTGSLYYFAGVTATSYLYPQSCATLGIIQLAIADPTASYFGRATRHVYWSRINKGFAGGLGRNKGILGFLGGGLACVPINYRILSLACNTVVRSSSIGASGAGASTALAISNPTILIASLVLGLAGAFADLIVPTPALTLPKTICGKTVPPFHLDDNFIVPVLSGYACTQIFKYVLGVPS 267          
BLAST of mRNA_H-elongata_contig14464.3066.1 vs. uniprot
Match: A0A7S2UMT5_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UMT5_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 1.130e-15
Identity = 67/221 (30.32%), Postives = 102/221 (46.15%), Query Frame = 0
Query:    3 FAVAYSAKLPRWEFSRCMALMDVFVFMTELARLR--IESVNRVVFGIFRPFMRAHELR-KFSGIMYCLAGLGLTSALFPKHIALLGMVQLAVGDPTAALCGHATRSVRWSRLRSG-------KGLLGALGCAVVLTLANFVTLYKAVFEEAPPPVERILLAAA--LIATWTAAVEASVPSP-----QKTLRYDGFPLAFDDNATLPVLGALGAAMVFRLLG 206
            F  A +  LPR +F   M  +     + EL R R     +N ++       +R HE+  KF+G  Y   G+  +  L+PK+ A +G++QLA+ DP+A+  G  TR V WSR+ +G       KG+LG LG A+     N+     A F     P  R  LA    ++    A  + +VP+P     +K L     PL  DDN  +P+  A     +  + G
Sbjct:  140 FFAALNHVLPREKFLPWMTFVTGSTLLMELLRYRKGFGWINSILHFFLGSSLRKHEMEGKFTGSFYYFLGVTASVYLYPKNAATMGIIQLALADPSASYFGRQTRDVYWSRIENGLGGFGRNKGILGFLGGALFCFPFNYRIFSLAKFGAGGIPGGRASLAGVSLVLGMSGALADLAVPTPALTMPKKVLGVRVPPLHVDDNFVVPLFSAYCYTKILPMFG 360          
BLAST of mRNA_H-elongata_contig14464.3066.1 vs. uniprot
Match: UPI001989E47C (Uncharacterized protein n=1 Tax=Bdellovibrionales bacterium TaxID=2053517 RepID=UPI001989E47C)

HSP 1 Score: 75.5 bits (184), Expect = 4.390e-13
Identity = 50/182 (27.47%), Postives = 84/182 (46.15%), Query Frame = 0
Query:   26 FVFMTELARLRIESVNRVVFGIFRPFMRAHELRKFSGIMYCLAGLGLTSALFPKHIALLGMVQLAVGDPTAALCGHATRSVRWSRLRSGKGLLGALGCAVVLTLANFVTLYKAVFEEAPPPVERILLAAALIATWTAAVEASVPSPQKTLRYDGFPLAFDDNATLPVLGALGAAMVFRLLGL 207
            F    E ARLR   +N     +  P MR HE+ K SG  + +A + L+ A+FPK IA+L ++ LA+GDP +++ G         R  +GK L+G      + ++  FV L              +L    L+ + + A+   +      +     PL  DDN ++P++  L   + F + G+
Sbjct:   57 FFLTAEYARLRFPKLNAFAIRVMGPVMRKHEVSKMSGTPFYIASVLLSVAIFPKPIAILSILFLAIGDPVSSIFGITYGDRIGMRFANGKSLIGTAAGMGICSVITFVYL--------------MLTGVPLVPSSSIALAGGLAGGGAEM----IPLDIDDNFSIPLVSGLALWIAFLVFGV 220          
BLAST of mRNA_H-elongata_contig14464.3066.1 vs. uniprot
Match: A0A4Q6C3G7_9PROT (Uncharacterized protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A4Q6C3G7_9PROT)

HSP 1 Score: 68.6 bits (166), Expect = 2.310e-10
Identity = 61/213 (28.64%), Postives = 96/213 (45.07%), Query Frame = 0
Query:    1 MTFAVAYSAKLPRWEFSRCMALMDVFVFMTELARLRIESVNRVVFGIFRPFMRAHELRKFSGIMYCLAGLGLTSALFPKHIALLGMVQLAVGDPTAALCGHAT--RSVRWSRLRSGKGLLGALGCAVVLTLANFVTLYKAVFEEAPPPVERILLAAALIATWTAAVEASVPSPQKTLRYDGFPLAFDDNATLPVLGALGAAMVFRLLGLEDCQ 211
            M    +Y   L R +    +A   +F    EL RL+   +N  +   +   MR+ E+ + SGI Y +    ++  +FPK IA+L +V LAVGDP A+L G     +SVR+S   +GK L+G +   +  +L    +L   +FE         +L       W  +V          L     P+  DDN  +PV+      +VF LL ++  Q
Sbjct:   49 MIMMASYFFWLTRAQAMMWLATAFLFNLGMELGRLKSPELNAHIMKTWGGIMRSCEVNRVSGIPYYIGATLISVTIFPKPIAILSVVCLAVGDPIASLFGITLGDKSVRFS---NGKSLIGTMAGVIACSLVIAASLL--LFESYG------MLRLNRDHFWMLSVIGGFAGGAAELT----PMEIDDNFAIPVISGFVLWLVFILLQIQIIQ 246          
BLAST of mRNA_H-elongata_contig14464.3066.1 vs. uniprot
Match: A0A3B1CQW6_9ZZZZ (Uncharacterized protein n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B1CQW6_9ZZZZ)

HSP 1 Score: 58.2 bits (139), Expect = 7.390e-7
Identity = 35/125 (28.00%), Postives = 64/125 (51.20%), Query Frame = 0
Query:   20 MALMDVFVFMT-ELARLRIESVNRVVFGIFRPFMRAHELRKFSGIMYCLAGLGLTSALFPKHIALLGMVQLAVGDPTAALCGHATRSVRWSRLRSGKGLLGALGCAVVLTLANFVTLYKAVFEEA 143
            + L+   V++T ++AR++I+S+NR+   +F+ FM+  E    +G  Y L G      LF   I+   +  +++GDP+AAL G     VR++   +GK + G+     V  +  +     A+   A
Sbjct:   47 LTLIVTAVWVTGDIARIKIDSINRLFKTLFKNFMKVKEENSLTGSSYVLIGSSAALLLFSPAISCASIYFMSIGDPSAALAGKTYGRVRFN---NGKSIEGSAAMFFVCLIIGYAITGSAIMAVA 168          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14464.3066.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D8LS95_ECTSI1.210e-10470.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6U5JUM7_9STRA2.390e-2333.78Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S4AI34_9STRA2.140e-1934.32Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7S4EJ41_9STRA2.860e-1934.32Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
K0R4U8_THAOC2.190e-1831.48Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A1E7F8F4_9STRA5.710e-1631.03Uncharacterized protein (Fragment) n=1 Tax=Fragila... [more]
A0A7S2UMT5_9STRA1.130e-1530.32Hypothetical protein n=1 Tax=Attheya septentrional... [more]
UPI001989E47C4.390e-1327.47Uncharacterized protein n=1 Tax=Bdellovibrionales ... [more]
A0A4Q6C3G7_9PROT2.310e-1028.64Uncharacterized protein n=1 Tax=Proteobacteria bac... [more]
A0A3B1CQW6_9ZZZZ7.390e-728.00Uncharacterized protein n=1 Tax=hydrothermal vent ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31303FAMILY NOT NAMEDcoord: 7..204
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 139..149
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 188..205
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 78..116
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 150..168
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 169..187
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 38..56
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 57..77
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..37
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 206..218
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 117..138
NoneNo IPR availableTMHMMTMhelixcoord: 188..207
NoneNo IPR availableTMHMMTMhelixcoord: 117..139
NoneNo IPR availableTMHMMTMhelixcoord: 62..84
NoneNo IPR availableTMHMMTMhelixcoord: 146..168

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig14464contigH-elongata_contig14464:1183..2650 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig14464.3066.1mRNA_H-elongata_contig14464.3066.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig14464 386..2720 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig14464.3066.1 ID=prot_H-elongata_contig14464.3066.1|Name=mRNA_H-elongata_contig14464.3066.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=219bp
MTFAVAYSAKLPRWEFSRCMALMDVFVFMTELARLRIESVNRVVFGIFRP
FMRAHELRKFSGIMYCLAGLGLTSALFPKHIALLGMVQLAVGDPTAALCG
HATRSVRWSRLRSGKGLLGALGCAVVLTLANFVTLYKAVFEEAPPPVERI
LLAAALIATWTAAVEASVPSPQKTLRYDGFPLAFDDNATLPVLGALGAAM
VFRLLGLEDCQLRPWVFV*
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