prot_H-elongata_contig144427.3050.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig144427.3050.1
Unique Nameprot_H-elongata_contig144427.3050.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length55
Homology
BLAST of mRNA_H-elongata_contig144427.3050.1 vs. uniprot
Match: A0A6H5JR07_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR07_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 6.940e-17
Identity = 37/54 (68.52%), Postives = 43/54 (79.63%), Query Frame = 0
Query:    1 MSVKDASVLAWSYGALGLRPPRLFGTLAREGLLMLHEATAHDLSNLAWGLARAG 54
            M+ KDAS+LAW+YG LGLRP R+   L REGL  + EAT HDLSNLAWGLA+AG
Sbjct:  477 MAAKDASILAWAYGMLGLRPSRVIEALTREGLATVQEATPHDLSNLAWGLAKAG 530          
BLAST of mRNA_H-elongata_contig144427.3050.1 vs. uniprot
Match: D7FYY5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYY5_ECTSI)

HSP 1 Score: 82.0 bits (201), Expect = 6.940e-17
Identity = 37/54 (68.52%), Postives = 43/54 (79.63%), Query Frame = 0
Query:    1 MSVKDASVLAWSYGALGLRPPRLFGTLAREGLLMLHEATAHDLSNLAWGLARAG 54
            M+ KDAS+LAW+YG LGLRP R+   L REGL  + EAT HDLSNLAWGLA+AG
Sbjct:  592 MAAKDASILAWAYGMLGLRPARVIEALTREGLATVQEATPHDLSNLAWGLAKAG 645          
BLAST of mRNA_H-elongata_contig144427.3050.1 vs. uniprot
Match: A0A813I5X4_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813I5X4_POLGL)

HSP 1 Score: 49.7 bits (117), Expect = 1.750e-5
Identity = 22/51 (43.14%), Postives = 30/51 (58.82%), Query Frame = 0
Query:    5 DASVLAWSYGALGLRPPRLFGTLAREGLLMLHEATAHDLSNLAWGLARAGV 55
            + S++AWS+G LG+  P LF  L  + +  L   T  DL  LAWG A +GV
Sbjct:  594 ELSIIAWSFGMLGVNNPTLFQALVIQAVPQLESFTMRDLLKLAWGFAASGV 644          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig144427.3050.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JR07_9PHAE6.940e-1768.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYY5_ECTSI6.940e-1768.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A813I5X4_POLGL1.750e-543.14Hypothetical protein n=2 Tax=Polarella glacialis T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig144427contigH-elongata_contig144427:721..885 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig144427.3050.1mRNA_H-elongata_contig144427.3050.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig144427 715..885 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig144427.3050.1 ID=prot_H-elongata_contig144427.3050.1|Name=mRNA_H-elongata_contig144427.3050.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=55bp
MSVKDASVLAWSYGALGLRPPRLFGTLAREGLLMLHEATAHDLSNLAWGL
ARAGV
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