prot_H-elongata_contig14430.3042.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig14430.3042.1
Unique Nameprot_H-elongata_contig14430.3042.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length157
Homology
BLAST of mRNA_H-elongata_contig14430.3042.1 vs. uniprot
Match: A0A6H5JYC2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYC2_9PHAE)

HSP 1 Score: 93.2 bits (230), Expect = 3.010e-19
Identity = 49/109 (44.95%), Postives = 67/109 (61.47%), Query Frame = 0
Query:    7 PAGAPNGGPRLTFPARAIQFLVNRFSLPGDTVLGVGVESTHMPEVVLDRGRRLELFLADMKSRSRIQERIDLAFMKAFNTGIFK-HNIEAVTVVSQHALPDDVPHETTP 114
            PAGAPNGG R  FP  A Q+ + RF+  GDTVLGVGVEST + E  + RGRR+E ++ D   R+ +Q +I   F KA ++G+F+   +    VV  + LP  +P  T P
Sbjct:  254 PAGAPNGGSRTFFPPTASQYFIARFTNAGDTVLGVGVESTTVAEDAISRGRRVEFYVTDESKRASLQAKISSTFHKAHSSGMFQSRRVGKEVVVGPNCLPAGLPPSTVP 362          
BLAST of mRNA_H-elongata_contig14430.3042.1 vs. uniprot
Match: A0A6H5KEI5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEI5_9PHAE)

HSP 1 Score: 89.4 bits (220), Expect = 8.510e-18
Identity = 48/109 (44.04%), Postives = 66/109 (60.55%), Query Frame = 0
Query:    7 PAGAPNGGPRLTFPARAIQFLVNRFSLPGDTVLGVGVESTHMPEVVLDRGRRLELFLADMKSRSRIQERIDLAFMKAFNTGIFKHNIEAV-TVVSQHALPDDVPHETTP 114
            PAGAPNGG R  FP  A Q+ + RF+  GDTVLGVGVEST + E  + RGRR+E ++ D   R+ +Q +I  +F KA ++G+F+        VV  + LP  +P    P
Sbjct:  236 PAGAPNGGSRTFFPPTASQYFIARFTNAGDTVLGVGVESTTVAEDAISRGRRVEFYVTDESKRASLQAKISSSFHKAHSSGMFQSRRGGKEVVVGPNCLPAGLPPSNVP 344          
BLAST of mRNA_H-elongata_contig14430.3042.1 vs. uniprot
Match: A0A6H5JDB1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDB1_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 1.760e-17
Identity = 48/107 (44.86%), Postives = 65/107 (60.75%), Query Frame = 0
Query:    7 PAGAPNGGPRLTFPARAIQFLVNRFSLPGDTVLGVGVESTHMPEVVLDRGRRLELFLADMKSRSRIQERIDLAFMKAFNTGIFKHNIEAV-TVVSQHALPDDVPHET 112
            PAGAPNGG R  FP  A Q+ + RF+  GDTVLGVGVEST + E  + RGRR+E ++ D   R+ +Q +I   F KA ++G+F+        VV  + LP  +P  T
Sbjct:  846 PAGAPNGGSRTFFPPTASQYFIARFTNAGDTVLGVGVESTTVAEDAISRGRRVEFYVTDESKRASLQAKISSTFHKAHSSGMFQSRRGGKEVVVGPNCLPAGLPPST 952          
BLAST of mRNA_H-elongata_contig14430.3042.1 vs. uniprot
Match: D7FYZ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYZ0_ECTSI)

HSP 1 Score: 88.2 bits (217), Expect = 2.080e-17
Identity = 51/131 (38.93%), Postives = 75/131 (57.25%), Query Frame = 0
Query:    7 PAGAPNGGPRLTFPARAIQFLVNRFSLPGDTVLGVGVESTHMPEVVLDRGRRLELFLADMKSRSRIQERIDLAFMKAFNTGIFKHNIEAVTV-VSQHALPDDVPHETTPPSLQPGKGKDTEDIILKSTKDM 136
            P GAPNGG R  FP+ A Q+L+ R++  GDTVLG+GVE+T  P   + RGRR+E ++ D   R+ +Q  I  AF KA ++G+F+       V V    LP  +P     PS  PG+ ++     L+  +D+
Sbjct:  185 PPGAPNGGSRTFFPSVACQYLIARYTNAGDTVLGIGVETTTAPVDAISRGRRVEFYVMDESKRAALQTNIASAFHKAHSSGMFQSRRGGQEVFVGPRCLPAGLP-----PSTAPGRVQEALKAELQKEEDV 310          
BLAST of mRNA_H-elongata_contig14430.3042.1 vs. uniprot
Match: A0A6H5KE40_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE40_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 3.840e-17
Identity = 47/109 (43.12%), Postives = 64/109 (58.72%), Query Frame = 0
Query:    7 PAGAPNGGPRLTFPARAIQFLVNRFSLPGDTVLGVGVESTHMPEVVLDRGRRLELFLADMKSRSRIQERIDLAFMKAFNTGIFKHNIEAV-TVVSQHALPDDVPHETTP 114
            PAGAPNGG R  FP    Q+ + RF+  GDTVLGVGVEST + E  + RGRR+E ++ D   R+ +Q +I   F KA ++G+F+        VV  +  P  +P  T P
Sbjct:   94 PAGAPNGGSRTVFPPTDSQYFIARFTNAGDTVLGVGVESTTVAEDAISRGRRVEFYVTDESKRASLQAKISSTFHKAHSSGMFQSRRGGKEVVVGPNCSPAGLPPSTVP 202          
BLAST of mRNA_H-elongata_contig14430.3042.1 vs. uniprot
Match: A0A6H5K708_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K708_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 7.510e-17
Identity = 47/109 (43.12%), Postives = 66/109 (60.55%), Query Frame = 0
Query:    7 PAGAPNGGPRLTFPARAIQFLVNRFSLPGDTVLGVGVESTHMPEVVLDRGRRLELFLADMKSRSRIQERIDLAFMKAFNTGIFKHNIEAV-TVVSQHALPDDVPHETTP 114
            PAGA NG  R  FP  A Q+ + RF+  GDTVLGVGVEST + E  + RGRR+E ++ D+  R+ +Q +I  +F KA ++G+F+        VV  + LP  +P  T P
Sbjct:  254 PAGARNGSSRTFFPPTASQYFIARFTNAGDTVLGVGVESTTVAEDAISRGRRVEFYVTDVSKRASLQAKISSSFHKAHSSGMFQSRRGGKEVVVGPNCLPAGLPPSTVP 362          
BLAST of mRNA_H-elongata_contig14430.3042.1 vs. uniprot
Match: A0A6H5JSZ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSZ7_9PHAE)

HSP 1 Score: 59.7 bits (143), Expect = 9.640e-9
Identity = 28/62 (45.16%), Postives = 42/62 (67.74%), Query Frame = 0
Query:   29 NRFSLPGDTVLGVGVESTHMPEVVLDRGRRLELFLADMKSRSRIQERIDLAFMKAFNTGIFK 90
            NR++  GDTVLG+GVE+T  P   + RGRR+E ++ D   R+ +Q  I  AF KA ++G+F+
Sbjct:   41 NRYTNAGDTVLGIGVETTTAPVDAISRGRRVEFYVMDESKRAALQTNIASAFHKAHSSGMFQ 102          
BLAST of mRNA_H-elongata_contig14430.3042.1 vs. uniprot
Match: A0A6H5K803_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K803_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 2.040e-6
Identity = 27/40 (67.50%), Postives = 30/40 (75.00%), Query Frame = 0
Query:    7 PAGAPNGGPRLTFPARAIQFLVNRFSLPGDTVLGVGVEST 46
            PAGAPNGG R  FP  A Q+ + RF+  GDTVLGVGVEST
Sbjct:  485 PAGAPNGGSRTCFPPTASQYFIARFTNAGDTVLGVGVEST 524          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14430.3042.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5JYC2_9PHAE3.010e-1944.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KEI5_9PHAE8.510e-1844.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JDB1_9PHAE1.760e-1744.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYZ0_ECTSI2.080e-1738.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KE40_9PHAE3.840e-1743.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K708_9PHAE7.510e-1743.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JSZ7_9PHAE9.640e-945.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K803_9PHAE2.040e-667.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig14430contigH-elongata_contig14430:2925..3699 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig14430.3042.1mRNA_H-elongata_contig14430.3042.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig14430 2428..7088 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig14430.3042.1 ID=prot_H-elongata_contig14430.3042.1|Name=mRNA_H-elongata_contig14430.3042.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=157bp
MFDLSYPAGAPNGGPRLTFPARAIQFLVNRFSLPGDTVLGVGVESTHMPE
VVLDRGRRLELFLADMKSRSRIQERIDLAFMKAFNTGIFKHNIEAVTVVS
QHALPDDVPHETTPPSLQPGKGKDTEDIILKSTKDMGCNLKVNVYCYRSR
YILSKH*
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