prot_H-elongata_contig144247.3038.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig144247.3038.1
Unique Nameprot_H-elongata_contig144247.3038.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length311
Homology
BLAST of mRNA_H-elongata_contig144247.3038.1 vs. uniprot
Match: A0A6H5JCV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCV2_9PHAE)

HSP 1 Score: 289 bits (740), Expect = 4.610e-86
Identity = 199/356 (55.90%), Postives = 218/356 (61.24%), Query Frame = 0
Query:    1 QPLCTGIFASHTDWVTGLAVASGRIMASSSNDGTLKLWDLAAAGSDLGGAGRTDRWEDRD-GGRTGLGERIGEWGSRDEVIPVHI---------NGSSSRSKSAPGSMGVSNGDR-GSNSHEDGSAXXXXXXXXXXXXXXXXXXXRPPLRPDPLATVAGHGDYVKCLTYAPEGGVFVSGGLDKRILLWDLQRMAAPLMALRTGDGEVDVA------------------------SPVTDRLV-------RGKPWC---GEGAWFHVRDPAKVVLRPGVAAAGPNEVFELCRQNKGSVYCVDASMDATLVASGGTDRMIRLLDPRAGSGHAARVCKLDGHRDNVRCVKIDEGGNRVV 311
            QP CTG+FASHTDWVTGLAVA GRIMAS+S DGTLKLWDLAAA          DR  + D GGR                               G   + + A    G +NG R G +  +D +A  XXXXXXXXXXXXXXXXXRP    + LATVAGHGDYVKCLTYA + GV VSGGLDKRILLWDLQRM+APLM LR G G                             SP   R          G PW    GEG W H+RDP +V LR G AAAGPNEV ELCRQNKGSV+CV A+ DA+LVASGGTDRMIRLLDPRAG   AA++CKLDGH DNVRCVKIDEGG RVV
Sbjct:   99 QPPCTGVFASHTDWVTGLAVAEGRIMASASYDGTLKLWDLAAA----------DRARNADKGGREAXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGLGGQGEEA---AGEANGLRTGMHGVQDTAARAXXXXXXXXXXXXXXXXXRP----NALATVAGHGDYVKCLTYAEQRGVLVSGGLDKRILLWDLQRMSAPLMVLRGGSGAXXXXXXXXXXXXXXXXXXXXXMMNSAGYSPAAGRQQVGGQRQGAGAPWLSDEGEGGWPHLRDPLRVALRAGQAAAGPNEVLELCRQNKGSVHCVAAAADASLVASGGTDRMIRLLDPRAGGAQAAKICKLDGHGDNVRCVKIDEGGTRVV 437          
BLAST of mRNA_H-elongata_contig144247.3038.1 vs. uniprot
Match: D8LJZ3_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJZ3_ECTSI)

HSP 1 Score: 246 bits (629), Expect = 2.020e-72
Identity = 131/205 (63.90%), Postives = 140/205 (68.29%), Query Frame = 0
Query:  138 LRPDPLATVAGHGDYVKCLTYAPEGGVFVSGGLDKRILLWDLQRMAAPLMALRTGDGEVDVA---------------------SPVTDRLVR-------GKPWC---GEGAWFHVRDPAKVVLRPGVAAAGPNEVFELCRQNKGSVYCVDASMDATLVASGGTDRMIRLLDPRAGSGHAARVCKLDGHRDNVRCVKIDEGGNRVV 311
            LRP+ LATVAGHGDYVKCLTYA + GV VSGGLDKRILLWDLQRM+APLM LR G G                          SP              G PW    GEG W H+RDP +V LR G AAAGPNEV ELCRQNKGSV+CV A+ DA+LVASGGTDRMIRLLDPRAG G AA+VCKLDGH DNVRCVKIDEGG RVV
Sbjct:   88 LRPNALATVAGHGDYVKCLTYAEQRGVLVSGGLDKRILLWDLQRMSAPLMVLRGGSGXXXXXXXXXXXXXXXXXXXXXXXXGYSPXXXXXXXXXXXQGAGAPWLSDEGEGGWPHLRDPLRVALRAGQAAAGPNEVLELCRQNKGSVHCVAAAADASLVASGGTDRMIRLLDPRAGGGQAAKVCKLDGHGDNVRCVKIDEGGTRVV 292          
BLAST of mRNA_H-elongata_contig144247.3038.1 vs. uniprot
Match: A0A388M9C0_CHABU (Uncharacterized protein n=2 Tax=Chara braunii TaxID=69332 RepID=A0A388M9C0_CHABU)

HSP 1 Score: 86.3 bits (212), Expect = 5.010e-15
Identity = 58/173 (33.53%), Postives = 84/173 (48.55%), Query Frame = 0
Query:  145 TVAGHGDYVKCLTYAPEGGVFVSGGLDKRILLWDLQRMAAPLMALRTGDGEVDVASPVTDRLVRGKPWCGEGAWFHVRDPAKVVL-------RPGVAAAGPNEVFEL---CRQNKGSVYCVDASMDATLVASGGTDRMIRLLDPRAGSGHAARVCKLDGHRDNVRCVKIDEGG 307
            T+  H DYVK L  A +  +  SGGL   + +WDL+    P+      DG    ASP+ D       + G G    +  PA   +       R G   AG + +       + +K SVY +  + D T++ASGGT++ IR+ DPR G    A+  KL GH DN+RC+ +D  G
Sbjct:  135 TLRQHSDYVKALAAARQTNLVASGGLRCEVFVWDLEGSTVPVARAPMNDG----ASPMHD----SGAYAGAGGMGVLGMPAGNSVHSSSAQDRSGCMGAGYSAITRTPVAFKGHKESVYALAMNDDGTVLASGGTEKAIRIWDPRTG----AKQMKLKGHSDNIRCLLLDPAG 295          
BLAST of mRNA_H-elongata_contig144247.3038.1 vs. uniprot
Match: A0A8H7SVP8_9FUNG (Uncharacterized protein n=1 Tax=Thamnidium elegans TaxID=101142 RepID=A0A8H7SVP8_9FUNG)

HSP 1 Score: 80.5 bits (197), Expect = 4.500e-13
Identity = 51/167 (30.54%), Postives = 78/167 (46.71%), Query Frame = 0
Query:  145 TVAGHGDYVKCLTYAPEGGVFVSGGLDKRILLWDLQRMAAPLMALRTGDGEVDVASPVTDRLVRGKPWCGEGAWFHVRDPAKVVLRPGVAAAGPNEVFELCRQNKGSVYCVDASMDATLVASGGTDRMIRLLDPRAGSGHAARVCKLDGHRDNVRCVKIDEGGNRVV 311
            T+  H D+ KCLTYA   G   SGGLD++I +WD+++  A L         +D                  G   H  D           + G N +  +   +K S+Y +  +   TL+ASG  ++++RL DPR+G     R+ KL GH DN+R + I + G  V+
Sbjct:  134 TIGYHTDFAKCLTYASSPGWVASGGLDRKINIWDIEKSEAAL--------SIDA-----------------GPSHHFTDET---------SEGNNSLNNI--SSKCSIYALAVNPTGTLLASGSPEKVVRLWDPRSGK----RISKLTGHTDNIRALLISDDGQYVI 260          
BLAST of mRNA_H-elongata_contig144247.3038.1 vs. uniprot
Match: A0A2G9H468_9LAMI (Uncharacterized protein n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9H468_9LAMI)

HSP 1 Score: 77.0 bits (188), Expect = 1.460e-12
Identity = 53/170 (31.18%), Postives = 81/170 (47.65%), Query Frame = 0
Query:  143 LATVAGHGDYVKCLTYAPEGGVFV-SGGLDKRILLWDLQRMAAPLMALRTGDGEVDVASPVTDRLVRGKPWCGEGAWFHVRDPAKVVLRPGVAAA-GPNEVFELCRQNKGSVYCVDASMDATLVASGGTDRMIRLLDPRAGSGHAARVCKLDGHRDNVRCVKIDEGGNRV 310
            + T   H DYV CL  A +   F+ SGGL   + +WDL+    PL   ++ D   D  S  T+ L    P     +   +     + + P  +   GP       + +K SVY +  +   TL+ SGGT++++R+ DPR GS    +  KL GH DN+R + +D  G  V
Sbjct:  119 IRTFRQHSDYVTCLAAADKNSNFLASGGLGGEVFIWDLEAALTPLS--KSNDANGDDCSTSTNGLGSSLP---NTSLRPISSSNNISVHPTQSQGYGPIAA----KGHKESVYALATNDRGTLLVSGGTEKVVRVWDPRTGS----KTMKLRGHTDNIRALLLDSTGRFV 275          
BLAST of mRNA_H-elongata_contig144247.3038.1 vs. uniprot
Match: A0A453K871_AEGTS (Uncharacterized protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453K871_AEGTS)

HSP 1 Score: 76.6 bits (187), Expect = 4.470e-12
Identity = 53/167 (31.74%), Postives = 78/167 (46.71%), Query Frame = 0
Query:  145 TVAGHGDYVKCLTYAPEGG-VFVSGGLDKRILLWDLQRMAAPLMALRTGDGEVDVASPVTDRLVRGKPWCGEGAWFHVRDPAKVVLRPGVAAAGPNEVFELCRQNKGSVYCVDASMDATLVASGGTDRMIRLLDPRAGSGHAARVCKLDGHRDNVRCVKIDEGGNRV 310
            T+  H DYV CL  A +   +  SGGL   + +WDL    AP+         VD      D +  G          +V     +V   G  + G + +    + +K SVY +D +   TL+ SGGT++++R+ DPR GS    +  KL GH DN+R + ID  G  V
Sbjct:  232 TLRQHSDYVICLAAAEKNSNIVASGGLGGEVFIWDLDAAIAPIAK------SVDAKE---DEVPNGNSGPALSTLCNVNSSGNIVSTNG-KSHGYSPIA--AKGHKDSVYALDMNDTGTLLVSGGTEKVVRVWDPRTGS----KNMKLRGHTDNIRALLIDSTGRFV 382          
BLAST of mRNA_H-elongata_contig144247.3038.1 vs. uniprot
Match: A0A1X2GQL8_9FUNG (WD40 repeat-like protein n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2GQL8_9FUNG)

HSP 1 Score: 76.6 bits (187), Expect = 8.030e-12
Identity = 46/155 (29.68%), Postives = 76/155 (49.03%), Query Frame = 0
Query:  145 TVAGHGDYVKCLTYAPEGGVFVSGGLDKRILLWDLQRMAAPLMALRTGDGEVDVASPVTDRLVRGKPWCGEGAWFHVRDPAKVVLRPGVAAAGPNEVFELCRQNKGSVYCVDASMDATLVASGGTDRMIRLLDPRAGSGHAARVCKLDGHRDNVR 299
            T+  H DYVKCL YA + G   SGGLDKRI +WDL++  A +++L+ G   ++  +   D +                           A+ GP         +K S+Y +  +   +L+ +G  ++++R+ DP++G     R+ KL GH DN+R
Sbjct:   42 TIGWHADYVKCLAYASQAGWVASGGLDKRICIWDLEKREA-VLSLQVGSMNMNNDASAGDAVG--------------------------ASHGP--------PSKSSIYAMAVNPTGSLLVTGSPEKVVRVWDPKSGK----RISKLTGHTDNIR 157          
BLAST of mRNA_H-elongata_contig144247.3038.1 vs. uniprot
Match: A0A367KKW5_RHIST (Uncharacterized protein (Fragment) n=1 Tax=Rhizopus stolonifer TaxID=4846 RepID=A0A367KKW5_RHIST)

HSP 1 Score: 75.1 bits (183), Expect = 2.750e-11
Identity = 51/155 (32.90%), Postives = 73/155 (47.10%), Query Frame = 0
Query:  145 TVAGHGDYVKCLTYAPEGGVFVSGGLDKRILLWDLQRMAAPLMALRTGDGEVDVASPVTDRLVRGKPWCGEGAWFHVRDPAKVVLRPGVAAAGPNEVFELCRQNKGSVYCVDASMDATLVASGGTDRMIRLLDPRAGSGHAARVCKLDGHRDNVR 299
            T+  H DY KCLTYA + G   SGGLD+RI +WD+++  A L         +D A PV                 H  D           +   N +      +K S+Y +  +   TL+ASG  ++++RL DPR+G     R+ KL GH DN+R
Sbjct:   87 TIGHHMDYAKCLTYASQPGWVASGGLDRRINIWDIEKSEASLT--------ID-AGPV----------------HHYTDNT---------SENTNTMHN--NSSKCSIYALAVNPSGTLMASGSPEKVVRLWDPRSGK----RISKLTGHTDNIR 201          
BLAST of mRNA_H-elongata_contig144247.3038.1 vs. uniprot
Match: A0A2K3PLF4_TRIPR (WD repeat-containing protein 48-like n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3PLF4_TRIPR)

HSP 1 Score: 72.8 bits (177), Expect = 4.520e-11
Identity = 53/170 (31.18%), Postives = 79/170 (46.47%), Query Frame = 0
Query:  145 TVAGHGDYVKCLTYAPEGG-VFVSGGLDKRILLWDLQRMAAPLMALRTGDGEVDVASPVTDRLVRGKPWCGE---GAWFHVRDPAKVVLRPGVAAAGPNEVFELCRQNKGSVYCVDASMDATLVASGGTDRMIRLLDPRAGSGHAARVCKLDGHRDNVRCVKIDEGGNRV 310
            T+  H DYV CL  A +   +  SGGL   + +WD++  AA   A +  D   D AS   +      P       G+   +   A+      VAA G  E          SVY +  +   TL+ SGGT++++R+ DPR+GS    +  KL GH DN+R + +D  G  +
Sbjct:  133 TLCQHSDYVTCLAAAEKNSNIVASGGLGGEVFIWDIE--AALASASKCNDAMDDDASNGVNSSGNSLPMTSLRTIGSSNSISMQAQTEGYIPVAAKGHKE----------SVYALAMNEGGTLLVSGGTEKVVRVWDPRSGS----KTMKLKGHTDNIRALILDSTGRNL 286          
BLAST of mRNA_H-elongata_contig144247.3038.1 vs. uniprot
Match: UPI000F60783A (WD repeat-containing protein 48 homolog n=1 Tax=Coffea eugenioides TaxID=49369 RepID=UPI000F60783A)

HSP 1 Score: 72.4 bits (176), Expect = 5.710e-11
Identity = 55/181 (30.39%), Postives = 81/181 (44.75%), Query Frame = 0
Query:  143 LATVAGHGDYVKCLTYAPEGG-VFVSGGLDKRILLWDLQRMAAPLMALRTGDGEVDVASPVTDRLVRGKPWCGEGAWFHVRDPAKVVLRPGVAAAGPNEVFELCRQNKG-----------SVYCVDASMDATLVASGGTDRMIRLLDPRAGSGHAARVCKLDGHRDNVRCVKIDEGGNRVV 311
            + T+  H DYV CL  A +   +  SGGL   + +WDL+   AP    ++ D   D  S            CG G+         V LRP       N +     Q++G           SVY +  +   TL+ SGGT++++R+ DPR GS    +  KL GH DN+R + +D  G  V+
Sbjct:  123 VRTLRQHTDYVTCLAAAEKNSNIVASGGLGGEVFIWDLETALAPHS--KSSDATEDDCSNGV---------CGSGSSL------PVSLRP---INSSNSISLHTTQSQGYVPIAAKGHKESVYALAMNESGTLLVSGGTEKVVRVWDPRTGS----KTMKLRGHTDNIRTLLLDSTGRFVL 279          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig144247.3038.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JCV2_9PHAE4.610e-8655.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJZ3_ECTSI2.020e-7263.90Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A388M9C0_CHABU5.010e-1533.53Uncharacterized protein n=2 Tax=Chara braunii TaxI... [more]
A0A8H7SVP8_9FUNG4.500e-1330.54Uncharacterized protein n=1 Tax=Thamnidium elegans... [more]
A0A2G9H468_9LAMI1.460e-1231.18Uncharacterized protein n=1 Tax=Handroanthus impet... [more]
A0A453K871_AEGTS4.470e-1231.74Uncharacterized protein n=1 Tax=Aegilops tauschii ... [more]
A0A1X2GQL8_9FUNG8.030e-1229.68WD40 repeat-like protein n=1 Tax=Hesseltinella ves... [more]
A0A367KKW5_RHIST2.750e-1132.90Uncharacterized protein (Fragment) n=1 Tax=Rhizopu... [more]
A0A2K3PLF4_TRIPR4.520e-1131.18WD repeat-containing protein 48-like n=1 Tax=Trifo... [more]
UPI000F60783A5.710e-1130.39WD repeat-containing protein 48 homolog n=1 Tax=Co... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 264..278
score: 31.44
coord: 26..40
score: 40.73
coord: 165..179
score: 35.67
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 1..39
e-value: 6.4E-7
score: 39.0
coord: 139..178
e-value: 2.8E-7
score: 40.2
coord: 238..277
e-value: 0.046
score: 22.9
IPR001680WD40 repeatPFAMPF00400WD40coord: 142..178
e-value: 2.1E-4
score: 22.0
coord: 250..275
e-value: 0.086
score: 13.7
coord: 4..39
e-value: 0.0012
score: 19.6
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 146..180
score: 13.951
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 8..40
score: 11.511
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 119..207
e-value: 3.1E-8
score: 35.0
coord: 1..66
e-value: 8.3E-8
score: 33.6
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 228..311
e-value: 9.1E-11
score: 42.9
NoneNo IPR availablePANTHERPTHR19855WD40 REPEAT PROTEIN 12, 37coord: 10..205
coord: 107..304
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 26..40
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 146..187
score: 12.763
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 245..311
score: 9.731
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 8..48
score: 10.311
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 4..310

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig144247contigH-elongata_contig144247:319..1251 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig144247.3038.1mRNA_H-elongata_contig144247.3038.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig144247 319..1251 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig144247.3038.1 ID=prot_H-elongata_contig144247.3038.1|Name=mRNA_H-elongata_contig144247.3038.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=311bp
QPLCTGIFASHTDWVTGLAVASGRIMASSSNDGTLKLWDLAAAGSDLGGA
GRTDRWEDRDGGRTGLGERIGEWGSRDEVIPVHINGSSSRSKSAPGSMGV
SNGDRGSNSHEDGSAAAAACGAGFEAQSPAPPPPRPPLRPDPLATVAGHG
DYVKCLTYAPEGGVFVSGGLDKRILLWDLQRMAAPLMALRTGDGEVDVAS
PVTDRLVRGKPWCGEGAWFHVRDPAKVVLRPGVAAAGPNEVFELCRQNKG
SVYCVDASMDATLVASGGTDRMIRLLDPRAGSGHAARVCKLDGHRDNVRC
VKIDEGGNRVV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf