prot_H-elongata_contig143677.3007.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig143677.3007.1
Unique Nameprot_H-elongata_contig143677.3007.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length152
Homology
BLAST of mRNA_H-elongata_contig143677.3007.1 vs. uniprot
Match: D7G7Q3_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Q3_ECTSI)

HSP 1 Score: 198 bits (504), Expect = 1.800e-58
Identity = 105/155 (67.74%), Postives = 116/155 (74.84%), Query Frame = 0
Query:    1 MAGGFEALGLAPELIRAVTEDLGYLLPTNVQDEAIPLILGGGDVMVAAETGSGKTAAFCLPVLQIIHEELRRR----SVQRPKLKGRGDAGSDSFGTGYVCQISVVDKDDDISVSPDGLSCQSRSPKWAGARGCTGVGGGIYCYEVRVDKSIYLR 151
            MAGGFEALGLAPEL+RAVTEDLGYLLPTNVQDEAIPLILGGGDVMVAAETGSGKTAAF LP+LQI+ E+LR R    +  RP  K  G  GS S     VC+IS  DKD  + VS DGLSCQ    KWAGARG  GV GG++C+EV+VD     R
Sbjct:    1 MAGGFEALGLAPELVRAVTEDLGYLLPTNVQDEAIPLILGGGDVMVAAETGSGKTAAFSLPLLQIVQEDLRSRLAGGAASRPTGKQSGGKGSSS-----VCRISRTDKDGQMVVSADGLSCQCEESKWAGARGEVGVLGGVHCFEVKVDFGNLCR 150          
BLAST of mRNA_H-elongata_contig143677.3007.1 vs. uniprot
Match: A0A6H5J9J1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9J1_9PHAE)

HSP 1 Score: 197 bits (501), Expect = 1.970e-56
Identity = 105/155 (67.74%), Postives = 115/155 (74.19%), Query Frame = 0
Query:    1 MAGGFEALGLAPELIRAVTEDLGYLLPTNVQDEAIPLILGGGDVMVAAETGSGKTAAFCLPVLQIIHEELRRR----SVQRPKLKGRGDAGSDSFGTGYVCQISVVDKDDDISVSPDGLSCQSRSPKWAGARGCTGVGGGIYCYEVRVDKSIYLR 151
            MAGGFEALGLAPELIRAVTEDLGYLLPTNVQDEAIPLILGGGDVMVAAETGSGKTAAF LP+LQI+ E+LR R    +  RP  K      SD  G   VC+IS  DKD  + VS DGLSCQ    KWAGARG  GV GG++C+EV+VD     R
Sbjct:    1 MAGGFEALGLAPELIRAVTEDLGYLLPTNVQDEAIPLILGGGDVMVAAETGSGKTAAFSLPLLQIVQEDLRSRLAGGAASRPTRKQ-----SDGKGNSSVCRISRTDKDGQMVVSADGLSCQCLQSKWAGARGEVGVLGGVHCFEVKVDFGNLFR 150          
BLAST of mRNA_H-elongata_contig143677.3007.1 vs. uniprot
Match: A0A2P6U292_CHLSO (DEAD box protein 1 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6U292_CHLSO)

HSP 1 Score: 144 bits (364), Expect = 3.330e-37
Identity = 77/149 (51.68%), Postives = 97/149 (65.10%), Query Frame = 0
Query:    5 FEALGLAPELIRAVTEDLGYLLPTNVQDEAIPLILGGGDVMVAAETGSGKTAAFCLPVLQIIHEELRRRSVQRPKLK-GRGDAGSDSFGTGYVCQISVVDKDDDISVSPDGLSCQSRSPK-WAGARGCTGVGGGIYCYEVRVDKSIYLR 151
            FE +G+APELIRAV E+LG+ LPT +Q E +PLILGGGD+M AAETGSGKT AF LPVLQI+HE +R R   R     G G+ G+D+      C ++  D+D  +++SPDGL CQ+RS + W G RG  G  GG   YE  V      R
Sbjct:  194 FEEVGVAPELIRAV-EELGWTLPTPIQAECVPLILGGGDIMAAAETGSGKTGAFALPVLQIVHEAIRTRQRSRQNAPAGGGNGGADAPP---ACVLNAEDRDSVVAISPDGLRCQARSEQAWGGVRGTVGAFGGRVYYEATVSDEGLCR 338          
BLAST of mRNA_H-elongata_contig143677.3007.1 vs. uniprot
Match: F0YHR0_AURAN (DEAD box protein 1 (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHR0_AURAN)

HSP 1 Score: 141 bits (356), Expect = 2.480e-36
Identity = 77/148 (52.03%), Postives = 97/148 (65.54%), Query Frame = 0
Query:    5 FEALGLAPELIRAVTEDLGYLLPTNVQDEAIPLILGGGDVMVAAETGSGKTAAFCLPVLQIIHEELRRRSVQRPKLKGRGDAGSDSFGTGYVCQISVVDKDDDISVSPDGLSCQSRSPKWAGARG-CTGVGGGIYCYEVRVDKSIYLR 151
            FEA+GL PEL   V E++GYLLPT VQDEAIPLILGGGDVMVAA TGSGKTAAF LP+L+++HE+LR         +  G A +          +S  D+D  +++S DG +CQSRS +WAGAR  C   G G+  YEV V+    +R
Sbjct:    1 FEAMGLMPELQMGV-EEIGYLLPTEVQDEAIPLILGGGDVMVAAPTGSGKTAAFALPILELVHEKLREGE------RTGGPARAAPAAAAGPPALSREDRDQTMAISDDGATCQSRSERWAGARANCGARGNGVVYYEVAVEDEGLVR 141          
BLAST of mRNA_H-elongata_contig143677.3007.1 vs. uniprot
Match: UPI000A2A722A (ATP-dependent RNA helicase DDX1 isoform X1 n=2 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A722A)

HSP 1 Score: 141 bits (356), Expect = 3.190e-36
Identity = 77/153 (50.33%), Postives = 97/153 (63.40%), Query Frame = 0
Query:    1 MAGGFEALGLAPELIRAVTEDLGYLLPTNVQDEAIPLILGGGDVMVAAETGSGKTAAFCLPVLQIIHEELRRRSVQR-PKLKGRGDAGSDSFGTGYVCQISVVDKDDDISVSPDGLSCQSRSP-KWAGARGCTGVGGGIYCYEVRVDKSIYLR 151
            MAG F   GL PE+ +AV E + +LLPT+VQ EAIPLILGGGDV++AAETGSGKT AFCLP++QI+HE +R     + PK   +GD GS  F      +++  D+D+  ++S DGL CQSR   KW G R   GV  G Y YE  V      R
Sbjct:    1 MAGHFSEFGLLPEICKAVDE-MDWLLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPIIQIVHENVRDAMAGKTPKASPQGDGGSTGF------KMNPFDRDESFAISQDGLLCQSREMYKWQGCRSTLGVKKGKYYYEATVTDEGLCR 146          
BLAST of mRNA_H-elongata_contig143677.3007.1 vs. uniprot
Match: E1Z2R1_CHLVA (DEAD box protein 1 n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z2R1_CHLVA)

HSP 1 Score: 140 bits (354), Expect = 6.270e-36
Identity = 78/154 (50.65%), Postives = 97/154 (62.99%), Query Frame = 0
Query:    5 FEALGLAPELIRAVTEDLGYLLPTNVQDEAIPLILGGGDVMVAAETGSGKTAAFCLPVLQIIHEELRRRSVQRPKLKGRGDAGSDSFGTGY------VCQISVVDKDDDISVSPDGLSCQSRSPK-WAGARGCTGVGGGIYCYEVRVDKSIYLR 151
            FE +G++PELI+AV E+LG++LPT +Q EA+PLILGGGDVM AAETGSGKT AF LPVLQI+HE LR R  Q+ +  G G  GS              C ++  D+D   ++SPDGL CQ+RS + W G RG  G  GG   YE  V      R
Sbjct:    4 FEEVGVSPELIKAV-EELGWMLPTPIQAEAVPLILGGGDVMAAAETGSGKTGAFALPVLQIVHETLRTR--QQNRAAGTGSNGSGQXXXXXSDQQPPACVLNSEDRDPVFAISPDGLRCQARSEQAWGGCRGTVGAFGGKVYYEATVADEGLCR 154          
BLAST of mRNA_H-elongata_contig143677.3007.1 vs. uniprot
Match: A0A7S3Y359_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y359_HETAK)

HSP 1 Score: 130 bits (326), Expect = 2.930e-34
Identity = 76/152 (50.00%), Postives = 92/152 (60.53%), Query Frame = 0
Query:    1 MAGGFEALGLAPELIRAVTEDLGYLLPTNVQDEAIPLILGGGDVMVAAETGSGKTAAFCLPVLQIIHEELRRRSVQRPKLKGRGDAGSDSFGTGYVCQISVVDKDDDISVSPDGLSCQSRSPKWAGARGCTGVG-GGIYCYEVRVDKSIYLR 151
            MAGGF+ALGL PEL++AV E LG+LLP++VQDEAIPL+LGGGDVM AAETGSGKT AF LPVLQ IHE  R  +  R +         D  G G    +    KD    +S   L  Q R P+WAG R   GV  GG + +E+  +     R
Sbjct:   30 MAGGFDALGLCPELVQAVDE-LGWLLPSDVQDEAIPLLLGGGDVMAAAETGSGKTGAFVLPVLQQIHEARRAAAAARDE---------DEAGPGGGWALCPGSKDAVFQLSRRNLHGQVRGPRWAGGRATKGVANGGRWYFEMTAETDGLCR 171          
BLAST of mRNA_H-elongata_contig143677.3007.1 vs. uniprot
Match: A0A2P6VLQ4_9CHLO (DEAD box protein 1 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VLQ4_9CHLO)

HSP 1 Score: 135 bits (341), Expect = 3.710e-34
Identity = 77/148 (52.03%), Postives = 90/148 (60.81%), Query Frame = 0
Query:    5 FEALGLAPELIRAVTEDLGYLLPTNVQDEAIPLILGGGDVMVAAETGSGKTAAFCLPVLQIIHEELRRRSVQRPKLKGRGDAGSDSFGTGYVCQISVVDKDDDISVSPDGLSCQSRSPK-WAGARGCTGVGGGIYCYEVRVDKSIYLR 151
            FE  G+APELI AV E LG+ LPT +Q EA+PLILGGGDVM AAETGSGKT AF LPVLQI+HE LR R   R    G G A S       +C ++  D+D   ++S DGL CQ+RS + W G RG  G   G   YE  V      R
Sbjct:    4 FEEAGVAPELISAVDE-LGWTLPTPIQAEAVPLILGGGDVMAAAETGSGKTGAFALPVLQIVHEALRTRQAARQAGGGGGTAPSAQRS---LCVLNAEDRDAVFAISGDGLRCQARSEQAWGGCRGTVGAFSGRVYYEATVSDEGLCR 147          
BLAST of mRNA_H-elongata_contig143677.3007.1 vs. uniprot
Match: A8IRS1_CHLRE (DEAD box protein 1 n=4 Tax=Chlamydomonas TaxID=3052 RepID=A8IRS1_CHLRE)

HSP 1 Score: 134 bits (336), Expect = 1.810e-33
Identity = 80/157 (50.96%), Postives = 96/157 (61.15%), Query Frame = 0
Query:    5 FEALGLAPELIRAVTEDLGYLLPTNVQDEAIPLILGGGDVMVAAETGSGKTAAFCLPVLQIIHEELRRRSVQRPKLKGRGDAGSDSFG-----TGYVCQISVVDKDDDISVSPDGLSCQSRSPK-WAGARGCTGV----GGGIYCYEVRVDKSIYLR 151
            FE LG+ PEL +AV EDLG++LP+ VQ EAIPLILGGGDVM AAETGSGKT AF +P+LQI+HE LR+R+         G                 C +S  D++  ++VSPDGLS QSRS K W G RG  GV    GG +Y YEV V      R
Sbjct:    4 FEELGVMPELAKAV-EDLGWMLPSPVQAEAIPLILGGGDVMAAAETGSGKTGAFAIPMLQIVHETLRQRARSGSAASTSGXXXXXXXXXXXSPAAVPCVLSSEDRELHVAVSPDGLSAQSRSEKAWGGVRGSVGVFASCGGKVY-YEVTVTDEGLCR 158          
BLAST of mRNA_H-elongata_contig143677.3007.1 vs. uniprot
Match: UPI00064514F9 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI00064514F9)

HSP 1 Score: 128 bits (321), Expect = 2.090e-33
Identity = 72/151 (47.68%), Postives = 93/151 (61.59%), Query Frame = 0
Query:    5 FEALGLAPELIRAVTEDLGYLLPTNVQDEAIPLILGGGDVMVAAETGSGKTAAFCLPVLQIIHEELRRRSVQRPKLKGRGDAGSDSFGTG----YVCQISVVDKDDDISVSPDGLSCQSRSPKWAGARGCTGVGGGIYCYEVRVDKSIYLR 151
            FE LG+ PE+I+AV E+L ++LPT +Q EAIPLILGGGDV+ AAETGSGKT AF LP+LQI +E +   +         G   +D+  +G         SV D+D+D+S+  DGL CQSR+P WAG R   G+  G Y YE  V      R
Sbjct:    4 FEDLGVMPEIIQAV-EELDWILPTPIQQEAIPLILGGGDVLAAAETGSGKTGAFALPILQITYEFINNVATVPSDAAAIGATETDTMDSGDSDKNTITWSVNDRDNDMSI--DGLVCQSRAPDWAGCRTNLGITSGKYYYEATVRDEGLCR 151          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig143677.3007.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7Q3_ECTSI1.800e-5867.74DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5J9J1_9PHAE1.970e-5667.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2P6U292_CHLSO3.330e-3751.68DEAD box protein 1 n=1 Tax=Chlorella sorokiniana T... [more]
F0YHR0_AURAN2.480e-3652.03DEAD box protein 1 (Fragment) n=1 Tax=Aureococcus ... [more]
UPI000A2A722A3.190e-3650.33ATP-dependent RNA helicase DDX1 isoform X1 n=2 Tax... [more]
E1Z2R1_CHLVA6.270e-3650.65DEAD box protein 1 n=1 Tax=Chlorella variabilis Ta... [more]
A0A7S3Y359_HETAK2.930e-3450.00Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A2P6VLQ4_9CHLO3.710e-3452.03DEAD box protein 1 n=1 Tax=Micractinium conductrix... [more]
A8IRS1_CHLRE1.810e-3350.96DEAD box protein 1 n=4 Tax=Chlamydomonas TaxID=305... [more]
UPI00064514F92.090e-3347.68hypothetical protein n=1 Tax=Acytostelium subglobo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.120.920coord: 96..151
e-value: 3.2E-7
score: 32.2
NoneNo IPR availableGENE3D3.40.50.300coord: 2..91
e-value: 1.0E-20
score: 75.8
NoneNo IPR availablePANTHERPTHR24031:SF601ATP-DEPENDENT RNA HELICASE SRMBcoord: 5..72
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 5..72
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 28..73
e-value: 1.1E-15
score: 57.9
IPR013320Concanavalin A-like lectin/glucanase domain superfamilySUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 98..146
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 4..72

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig143677contigH-elongata_contig143677:232..687 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig143677.3007.1mRNA_H-elongata_contig143677.3007.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig143677 232..687 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig143677.3007.1 ID=prot_H-elongata_contig143677.3007.1|Name=mRNA_H-elongata_contig143677.3007.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=152bp
MAGGFEALGLAPELIRAVTEDLGYLLPTNVQDEAIPLILGGGDVMVAAET
GSGKTAAFCLPVLQIIHEELRRRSVQRPKLKGRGDAGSDSFGTGYVCQIS
VVDKDDDISVSPDGLSCQSRSPKWAGARGCTGVGGGIYCYEVRVDKSIYL
R*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011545DEAD/DEAH_box_helicase_dom
IPR013320ConA-like_dom_sf
IPR027417P-loop_NTPase