prot_H-elongata_contig143442.2993.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig143442.2993.1
Unique Name	prot_H-elongata_contig143442.2993.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	171

Homology

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BLAST of mRNA_H-elongata_contig143442.2993.1 vs. uniprot
Match: A0A6H5L660_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L660_9PHAE)

HSP 1 Score: 124 bits (311), Expect = 4.800e-31
Identity = 79/179 (44.13%), Postives = 105/179 (58.66%), Query Frame = 0

Query:    4 RSREREITVATDNVRTLAVDGKHGVGW-VLDVLNIYDRLGCDVIGLQETRRSGHSAFNQAGYSVYCSGECGGENSGKRGQGGVGLAIRT----SITRAARPPEFISDRLLNVTLELRGRAKAITFFVAYAPTET------HNASSEHAFWTSLERAVEEVLRHEQLFVLMDANARTGMR 171
            ++RE +++  T NVRTLA  G++ +G  V+ V+ I    GCDVIGLQETRR G  +    GY +  SG   G    KRG  GVG+AI+     S+    R  E I  RL+ V L + GR   ITF V YAPTET       + +++ +FWT+L+  + EV  H+ L VLMDANARTG R
Sbjct:  142 KAREGDLSFGTFNVRTLAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKD-KRGVHGVGIAIKETMWESVGEEGRKVECIGPRLMKVRLRI-GRTCGITFVVRYAPTETVRTTAGGDINAKDSFWTALDAVIREVHSHDHLVVLMDANARTGRR 318

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BLAST of mRNA_H-elongata_contig143442.2993.1 vs. uniprot
Match: A0A6H5K3Q1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Q1_9PHAE)

HSP 1 Score: 125 bits (315), Expect = 1.670e-30
Identity = 79/179 (44.13%), Postives = 108/179 (60.34%), Query Frame = 0

Query:    4 RSREREITVATDNVRTLAVDGKHGVGW-VLDVLNIYDRLGCDVIGLQETRRSGHSAFNQAGYSVYCSGECGGENSGKRGQGGVGLAIRT----SITRAARPPEFISDRLLNVTLELRGRAKAITFFVAYAPTETH------NASSEHAFWTSLERAVEEVLRHEQLFVLMDANARTGMR 171
            ++RE +++  T NVRTLA  G++ +G  V+ V+ I    GCDVIGLQETRR+G  +    GY +  SG   G    KRG  GVG+AI+     S+    R  E IS RL+ V L++ GR   +TF V YAPTET       + +++ +FWT+L+ A+ EV   + L VLMDANARTG R
Sbjct:  169 KAREGDLSFGTFNVRTLAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRRAGQGSIAHDGYVIIWSGARAGTKD-KRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFLVGYAPTETVRTTEGCDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRR 345

[Close]

BLAST of mRNA_H-elongata_contig143442.2993.1 vs. uniprot
Match: A0A6H5JMB4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMB4_9PHAE)

HSP 1 Score: 125 bits (315), Expect = 2.000e-30
Identity = 79/179 (44.13%), Postives = 108/179 (60.34%), Query Frame = 0

Query:    4 RSREREITVATDNVRTLAVDGKHGVGW-VLDVLNIYDRLGCDVIGLQETRRSGHSAFNQAGYSVYCSGECGGENSGKRGQGGVGLAIRT----SITRAARPPEFISDRLLNVTLELRGRAKAITFFVAYAPTET------HNASSEHAFWTSLERAVEEVLRHEQLFVLMDANARTGMR 171
            ++RE +++  T NVRTLA  G++ +G  V+ V+ I    GCDVIGLQETRR+G  +    GY +  SG   G    KRG  GVG+AI+     S+    R  E IS RL+ V L++ GR   +TF V YAPTET       + +++ +FWT+L+ A+ EV   + L VLMDANARTG R
Sbjct:   80 KAREGDLSFGTFNVRTLAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRRAGQGSIAHDGYVIIWSGARAGTKD-KRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRR 256

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BLAST of mRNA_H-elongata_contig143442.2993.1 vs. uniprot
Match: A0A6H5KZE6_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZE6_9PHAE)

HSP 1 Score: 120 bits (302), Expect = 3.580e-30
Identity = 77/179 (43.02%), Postives = 106/179 (59.22%), Query Frame = 0

Query:    4 RSREREITVATDNVRTLAVDGKHGVGW-VLDVLNIYDRLGCDVIGLQETRRSGHSAFNQAGYSVYCSGECGGENSGKRGQGGVGLAIRTSITRAA----RPPEFISDRLLNVTLELRGRAKAITFFVAYAPTET------HNASSEHAFWTSLERAVEEVLRHEQLFVLMDANARTGMR 171
            ++RE +++  T NV TLA  G++ +G  V+ V+ I    GCDVIGLQETRR G  +    GY +  SG   G    KRG  GVG+AI+ +I  +     R  E IS RL+ V L++ GR   +TF V YAPTET       + +++ +FWT+L+ A+ EV   + L VLM ANARTG R
Sbjct:    3 KAREGDLSFGTFNVHTLAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKD-KRGGHGVGIAIKEAIWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRSTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMGANARTGRR 179

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BLAST of mRNA_H-elongata_contig143442.2993.1 vs. uniprot
Match: A0A6H5JVN7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVN7_9PHAE)

HSP 1 Score: 122 bits (306), Expect = 4.170e-29
Identity = 76/179 (42.46%), Postives = 107/179 (59.78%), Query Frame = 0

Query:    4 RSREREITVATDNVRTLAVDGKHGVGW-VLDVLNIYDRLGCDVIGLQETRRSGHSAFNQAGYSVYCSGECGGENSGKRGQGGVGLAIRTS----ITRAARPPEFISDRLLNVTLELRGRAKAITFFVAYAPTET------HNASSEHAFWTSLERAVEEVLRHEQLFVLMDANARTGMR 171
            ++RE +++  T +VRTL   G++ +G  V+ V+ I    GCDVIGLQETRR G  +    GY +  SG   G    KRG+ GVG+AI+ +    +    R  E IS RL+ V L++ GR   +TF V YAPTET       + +++ +FWT+L+ A+ EV   + L VLMDANARTG R
Sbjct:  149 KAREGDLSFGTFSVRTLVYSGRNPIGHNVMKVMQISSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKD-KRGEQGVGIAIKEAMWETVGEEGRKVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRITAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRR 325

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BLAST of mRNA_H-elongata_contig143442.2993.1 vs. uniprot
Match: A0A6H5K1H7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H7_9PHAE)

HSP 1 Score: 122 bits (305), Expect = 5.800e-29
Identity = 78/179 (43.58%), Postives = 106/179 (59.22%), Query Frame = 0

Query:    4 RSREREITVATDNVRTLAVDGKHGVGW-VLDVLNIYDRLGCDVIGLQETRRSGHSAFNQAGYSVYCSGECGGENSGKRGQGGVGLAIRT----SITRAARPPEFISDRLLNVTLELRGRAKAITFFVAYAPTET------HNASSEHAFWTSLERAVEEVLRHEQLFVLMDANARTGMR 171
            ++RE +++  T NV TLA  G++ +G  V+ V+ I    GCDVIGLQETRR G  +    GY +  SG   G    KRG  GVG+AI+     S+    R  E IS RL+ V L++ GR   +TF V YAPTET       + +++ +FWT+L+ A+ EV   + L VLMDANARTG R
Sbjct:  651 KAREGDLSFGTFNVCTLAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKD-KRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVRYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRR 827

[Close]

BLAST of mRNA_H-elongata_contig143442.2993.1 vs. uniprot
Match: A0A6H5KV75_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV75_9PHAE)

HSP 1 Score: 120 bits (301), Expect = 5.900e-29
Identity = 76/179 (42.46%), Postives = 105/179 (58.66%), Query Frame = 0

Query:    4 RSREREITVATDNVRTLAVDGKHGVGW-VLDVLNIYDRLGCDVIGLQETRRSGHSAFNQAGYSVYCSGECGGENSGKRGQGGVGLAIRT----SITRAARPPEFISDRLLNVTLELRGRAKAITFFVAYAPTET------HNASSEHAFWTSLERAVEEVLRHEQLFVLMDANARTGMR 171
            ++RE +++  T NVRTLA  G++ +G  V+ V+ I    GCDVIGLQETRR+G  +    GY +  SG   G    KRG  GVG+ I+     S+    R  E I  RL+ V L++ GR   + F V YAPTET       + +++ +FWT+L+ A+ EV   + L VLMDANARTG R
Sbjct:   75 KAREGDLSFGTFNVRTLACSGRNPIGHNVMTVMQICSATGCDVIGLQETRRAGQGSIAHDGYVIIWSGARAGTKD-KRGVHGVGIVIKEAMWESVGEEGRTVECICPRLMKVRLQI-GRTCGVAFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRR 251

[Close]

BLAST of mRNA_H-elongata_contig143442.2993.1 vs. uniprot
Match: A0A6H5K5A7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A7_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 3.790e-28
Identity = 76/179 (42.46%), Postives = 105/179 (58.66%), Query Frame = 0

Query:    4 RSREREITVATDNVRTLAVDGKHGVGW-VLDVLNIYDRLGCDVIGLQETRRSGHSAFNQAGYSVYCSGECGGENSGKRGQGGVGLAIRT----SITRAARPPEFISDRLLNVTLELRGRAKAITFFVAYAPTET------HNASSEHAFWTSLERAVEEVLRHEQLFVLMDANARTGMR 171
            ++RE +++  T NVRTLA  G++ +G  V+ V+ I+   GCDVIGLQETRR G  +    GY +  SG   G    KRG  GVG+AI+     S+    R  E IS RL+ V L++ G    +   V YAPTET       + +++ +FWT+L+ A+ EV   + L VLMDANARTG R
Sbjct:  127 KAREGDLSFGTFNVRTLAYSGRNPIGHNVMTVMQIWSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKD-KRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GHTCGVISVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRR 303

[Close]

BLAST of mRNA_H-elongata_contig143442.2993.1 vs. uniprot
Match: A0A6H5K0W6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0W6_9PHAE)

HSP 1 Score: 119 bits (298), Expect = 5.140e-28
Identity = 77/178 (43.26%), Postives = 104/178 (58.43%), Query Frame = 0

Query:    5 SREREITVATDNVRTLAVDGKHGVGW-VLDVLNIYDRLGCDVIGLQETRRSGHSAFNQAGYSVYCSGECGGENSGKRGQGGVGLAIRT----SITRAARPPEFISDRLLNVTLELRGRAKAITFFVAYAPTET------HNASSEHAFWTSLERAVEEVLRHEQLFVLMDANARTGMR 171
            +RE +++  T NVRTLA  G++ +G  V+ V+ I    GCDVIGLQETRR G  +    GY +  SG   G    KRG  GVG+AI+     S+    R  E  S RL+ V L++ GR   +TF V YA TET       + +++ +FWT+L+ A+ EV   + L VLMDANARTG R
Sbjct:  815 AREGDLSFGTFNVRTLAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKD-KRGVHGVGIAIKEVMWESVGEEGRTVECSSPRLMKVRLQI-GRTCRVTFVVGYALTETVRTTAGRDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRR 990

[Close]

BLAST of mRNA_H-elongata_contig143442.2993.1 vs. uniprot
Match: A0A6H5JGX2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGX2_9PHAE)

HSP 1 Score: 118 bits (296), Expect = 9.150e-28
Identity = 75/177 (42.37%), Postives = 103/177 (58.19%), Query Frame = 0

Query:    4 RSREREITVATDNVRTLAVDGKHGVGW-VLDVLNIYDRLGCDVIGLQETRRSGHSAFNQAGYSVYCSGECGGENSGKRGQGGVGLAIRT----SITRAARPPEFISDRLLNVTLELRGRAKAITFFVAYAPTET------HNASSEHAFWTSLERAVEEVLRHEQLFVLMDANARTG 169
            ++RE +++    NVRTLA  G+  +G  V+ ++ I    GCDVIGLQETRR G  +    GY +  SG   G    KRG  GVG+AI+     S+    R  E IS RL+ V L++ GR   +TF V YAPTET       + +++ +FWT+L+ A+ EV   + L VLMDANART 
Sbjct:   53 KAREGDLSFGAFNVRTLAYSGRKPIGHNVMTIMQICSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKD-KRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTA 227

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig143442.2993.1 vs. uniprot

BLAST of mRNA_H-elongata_contig143442.2993.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5L660_9PHAE	4.800e-31	44.13	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K3Q1_9PHAE	1.670e-30	44.13	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5JMB4_9PHAE	2.000e-30	44.13	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5KZE6_9PHAE	3.580e-30	43.02	Endo/exonuclease/phosphatase domain-containing pro...	[more]
A0A6H5JVN7_9PHAE	4.170e-29	42.46	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5K1H7_9PHAE	5.800e-29	43.58	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KV75_9PHAE	5.900e-29	42.46	Endo/exonuclease/phosphatase domain-containing pro...	[more]
A0A6H5K5A7_9PHAE	3.790e-28	42.46	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K0W6_9PHAE	5.140e-28	43.26	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5JGX2_9PHAE	9.150e-28	42.37	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	GENE3D	3.60.10.10		coord: 31..171 e-value: 4.6E-14 score: 54.4
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	SUPERFAMILY	56219	DNase I-like	coord: 7..169

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig143442	contig	H-elongata_contig143442:1059..1571 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig143442.2993.1	mRNA_H-elongata_contig143442.2993.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig143442 1059..1571 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig143442.2993.1 ID=prot_H-elongata_contig143442.2993.1|Name=mRNA_H-elongata_contig143442.2993.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=171bp
KRARSREREITVATDNVRTLAVDGKHGVGWVLDVLNIYDRLGCDVIGLQE
TRRSGHSAFNQAGYSVYCSGECGGENSGKRGQGGVGLAIRTSITRAARPP
EFISDRLLNVTLELRGRAKAITFFVAYAPTETHNASSEHAFWTSLERAVE
EVLRHEQLFVLMDANARTGMR

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036691	Endo/exonu/phosph_ase_sf