prot_H-elongata_contig14320.2982.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig14320.2982.1
Unique Name	prot_H-elongata_contig14320.2982.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	150

Homology

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BLAST of mRNA_H-elongata_contig14320.2982.1 vs. uniprot
Match: A0A6H5JBD7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBD7_9PHAE)

HSP 1 Score: 122 bits (306), Expect = 1.960e-29
Identity = 68/151 (45.03%), Postives = 92/151 (60.93%), Query Frame = 0

Query:    1 MAVDGKHGVGRALDVLNIYDRLGCDVIGLQETRRSGHSAFNQAGYSVFCSGECGGENGGKKGQGGVGLAIRTSITRAAR-PPEFISDRLLKVTLELRGRAKAITFLVAYAPTETHNASNKHAFWTSLDRAVEEVPRHEQLFVLMDANARTG 150
            +AV G +G GRA  VL+   R    V+G+QETRR+G + F  AG+ VFC   CG E GG  G   VG+A++ S+ + +    EFI +RL+ + L L G   A+ F+ A APTE   AS+K  FW  LD  V  +P  E ++VL+DANARTG
Sbjct:   68 LAVIGVNGYGRAYSVLHEAARQDVSVVGMQETRRAGRTEFAAAGFRVFC---CGTETGGVHG---VGIAVKESLCKTSTFTTEFIDERLMAMRLLLAGHRGAVNFVAASAPTEPSTASSKRVFWGKLDSLVRRIPSKECVYVLLDANARTG 212

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BLAST of mRNA_H-elongata_contig14320.2982.1 vs. uniprot
Match: A0A6H5K3Q1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Q1_9PHAE)

HSP 1 Score: 118 bits (295), Expect = 4.550e-28
Identity = 72/161 (44.72%), Postives = 94/161 (58.39%), Query Frame = 0

Query:    1 MAVDGKHGVGR-ALDVLNIYDRLGCDVIGLQETRRSGHSAFNQAGYSVFCSGECGGENGGKKGQGGVGLAIRT----SITRAARPPEFISDRLLKVTLELRGRAKAITFLVAYAPTETHNASN------KHAFWTSLDRAVEEVPRHEQLFVLMDANARTG 150
            +A  G++ +G   + V+ I    GCDVIGLQETRR+G  +    GY +  SG   G    K+G  GVG+AI+     S+    R  E IS RL+KV L++ GR   +TFLV YAPTET   +       K +FWT+LD A+ EV   + L VLMDANARTG
Sbjct:  185 LAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRRAGQGSIAHDGYVIIWSGARAGTKD-KRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFLVGYAPTETVRTTEGCDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTG 343

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BLAST of mRNA_H-elongata_contig14320.2982.1 vs. uniprot
Match: A0A6H5L660_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L660_9PHAE)

HSP 1 Score: 115 bits (288), Expect = 5.250e-28
Identity = 71/161 (44.10%), Postives = 92/161 (57.14%), Query Frame = 0

Query:    1 MAVDGKHGVGR-ALDVLNIYDRLGCDVIGLQETRRSGHSAFNQAGYSVFCSGECGGENGGKKGQGGVGLAIRT----SITRAARPPEFISDRLLKVTLELRGRAKAITFLVAYAPTET------HNASNKHAFWTSLDRAVEEVPRHEQLFVLMDANARTG 150
            +A  G++ +G   + V+ I    GCDVIGLQETRR G  +    GY +  SG   G    K+G  GVG+AI+     S+    R  E I  RL+KV L + GR   ITF+V YAPTET       + + K +FWT+LD  + EV  H+ L VLMDANARTG
Sbjct:  158 LAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKD-KRGVHGVGIAIKETMWESVGEEGRKVECIGPRLMKVRLRI-GRTCGITFVVRYAPTETVRTTAGGDINAKDSFWTALDAVIREVHSHDHLVVLMDANARTG 316

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BLAST of mRNA_H-elongata_contig14320.2982.1 vs. uniprot
Match: A0A6H5KZE6_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZE6_9PHAE)

HSP 1 Score: 114 bits (284), Expect = 7.810e-28
Identity = 70/161 (43.48%), Postives = 94/161 (58.39%), Query Frame = 0

Query:    1 MAVDGKHGVGR-ALDVLNIYDRLGCDVIGLQETRRSGHSAFNQAGYSVFCSGECGGENGGKKGQGGVGLAIRTSITRAA----RPPEFISDRLLKVTLELRGRAKAITFLVAYAPTET------HNASNKHAFWTSLDRAVEEVPRHEQLFVLMDANARTG 150
            +A  G++ +G   + V+ I    GCDVIGLQETRR G  +    GY +  SG   G    K+G  GVG+AI+ +I  +     R  E IS RL+KV L++ GR   +TF+V YAPTET       + + K +FWT+LD A+ EV   + L VLM ANARTG
Sbjct:   19 LAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKD-KRGGHGVGIAIKEAIWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRSTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMGANARTG 177

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BLAST of mRNA_H-elongata_contig14320.2982.1 vs. uniprot
Match: A0A6H5JMB4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMB4_9PHAE)

HSP 1 Score: 117 bits (292), Expect = 1.320e-27
Identity = 71/161 (44.10%), Postives = 95/161 (59.01%), Query Frame = 0

Query:    1 MAVDGKHGVGR-ALDVLNIYDRLGCDVIGLQETRRSGHSAFNQAGYSVFCSGECGGENGGKKGQGGVGLAIRT----SITRAARPPEFISDRLLKVTLELRGRAKAITFLVAYAPTET------HNASNKHAFWTSLDRAVEEVPRHEQLFVLMDANARTG 150
            +A  G++ +G   + V+ I    GCDVIGLQETRR+G  +    GY +  SG   G    K+G  GVG+AI+     S+    R  E IS RL+KV L++ GR   +TF+V YAPTET       + + K +FWT+LD A+ EV   + L VLMDANARTG
Sbjct:   96 LAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRRAGQGSIAHDGYVIIWSGARAGTKD-KRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTG 254

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BLAST of mRNA_H-elongata_contig14320.2982.1 vs. uniprot
Match: A0A6H5K1H7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H7_9PHAE)

HSP 1 Score: 116 bits (290), Expect = 2.860e-27
Identity = 71/161 (44.10%), Postives = 94/161 (58.39%), Query Frame = 0

Query:    1 MAVDGKHGVGR-ALDVLNIYDRLGCDVIGLQETRRSGHSAFNQAGYSVFCSGECGGENGGKKGQGGVGLAIRT----SITRAARPPEFISDRLLKVTLELRGRAKAITFLVAYAPTET------HNASNKHAFWTSLDRAVEEVPRHEQLFVLMDANARTG 150
            +A  G++ +G   + V+ I    GCDVIGLQETRR G  +    GY +  SG   G    K+G  GVG+AI+     S+    R  E IS RL+KV L++ GR   +TF+V YAPTET       + + K +FWT+LD A+ EV   + L VLMDANARTG
Sbjct:  667 LAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKD-KRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVRYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTG 825

[Close]

BLAST of mRNA_H-elongata_contig14320.2982.1 vs. uniprot
Match: A0A6H5JVN7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVN7_9PHAE)

HSP 1 Score: 115 bits (288), Expect = 5.220e-27
Identity = 69/161 (42.86%), Postives = 94/161 (58.39%), Query Frame = 0

Query:    1 MAVDGKHGVGR-ALDVLNIYDRLGCDVIGLQETRRSGHSAFNQAGYSVFCSGECGGENGGKKGQGGVGLAIRTS----ITRAARPPEFISDRLLKVTLELRGRAKAITFLVAYAPTET------HNASNKHAFWTSLDRAVEEVPRHEQLFVLMDANARTG 150
            +   G++ +G   + V+ I    GCDVIGLQETRR G  +    GY +  SG   G    K+G+ GVG+AI+ +    +    R  E IS RL+KV L++ GR   +TF+V YAPTET       + + K +FWT+LD A+ EV   + L VLMDANARTG
Sbjct:  165 LVYSGRNPIGHNVMKVMQISSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKD-KRGEQGVGIAIKEAMWETVGEEGRKVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRITAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTG 323

[Close]

BLAST of mRNA_H-elongata_contig14320.2982.1 vs. uniprot
Match: A0A6H5KBZ6_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBZ6_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 6.260e-27
Identity = 68/148 (45.95%), Postives = 87/148 (58.78%), Query Frame = 0

Query:   13 LDVLNIYDRLGCDVIGLQETRRSGHSAFNQAGYSVFCSGECGGENGGKKGQGGVGLAIRT----SITRAARPPEFISDRLLKVTLELRGRAKAITFLVAYAPTET------HNASNKHAFWTSLDRAVEEVPRHEQLFVLMDANARTG 150
            + V+ I    GCDVIGLQETRR G  +    GY +  SG   G    K+G  GVG+AI+     S+    R  E IS RL+KV L++ GR   +TF+V YAPTET       + + K +FWT+LD A+ EV   + L VLMDANARTG
Sbjct:    1 MTVMQICSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKD-KRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTG 146

[Close]

BLAST of mRNA_H-elongata_contig14320.2982.1 vs. uniprot
Match: A0A6H5KQ63_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ63_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 2.680e-26
Identity = 69/148 (46.62%), Postives = 86/148 (58.11%), Query Frame = 0

Query:   13 LDVLNIYDRLGCDVIGLQETRRSGHSAFNQAGYSVFCSGECGGENGGKKGQGGVGLAIRT----SITRAARPPEFISDRLLKVTLELRGRAKAITFLVAYAPTET------HNASNKHAFWTSLDRAVEEVPRHEQLFVLMDANARTG 150
            + V+ I    GCDVIGLQETRR G  +    GY    SG   G  G K G  GVG+AI+     S+    R  E IS RL+KV L++ GR   +TF+V YAPTET       + + K +FWT+LD A+ EV   + L VLMDANARTG
Sbjct:    1 MTVMQICSATGCDVIGLQETRREGQGSIAHDGYVFIWSGARAGTKG-KWGVHGVGIAIKEAMWQSVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTG 146

[Close]

BLAST of mRNA_H-elongata_contig14320.2982.1 vs. uniprot
Match: A0A6H5JGX2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGX2_9PHAE)

HSP 1 Score: 113 bits (282), Expect = 3.340e-26
Identity = 69/161 (42.86%), Postives = 92/161 (57.14%), Query Frame = 0

Query:    1 MAVDGKHGVGR-ALDVLNIYDRLGCDVIGLQETRRSGHSAFNQAGYSVFCSGECGGENGGKKGQGGVGLAIRT----SITRAARPPEFISDRLLKVTLELRGRAKAITFLVAYAPTET------HNASNKHAFWTSLDRAVEEVPRHEQLFVLMDANARTG 150
            +A  G+  +G   + ++ I    GCDVIGLQETRR G  +    GY +  SG   G    K+G  GVG+AI+     S+    R  E IS RL+KV L++ GR   +TF+V YAPTET       + + K +FWT+LD A+ EV   + L VLMDANART 
Sbjct:   69 LAYSGRKPIGHNVMTIMQICSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKD-KRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTA 227

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig14320.2982.1 vs. uniprot

BLAST of mRNA_H-elongata_contig14320.2982.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JBD7_9PHAE	1.960e-29	45.03	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5K3Q1_9PHAE	4.550e-28	44.72	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5L660_9PHAE	5.250e-28	44.10	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KZE6_9PHAE	7.810e-28	43.48	Endo/exonuclease/phosphatase domain-containing pro...	[more]
A0A6H5JMB4_9PHAE	1.320e-27	44.10	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5K1H7_9PHAE	2.860e-27	44.10	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JVN7_9PHAE	5.220e-27	42.86	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5KBZ6_9PHAE	6.260e-27	45.95	Endo/exonuclease/phosphatase domain-containing pro...	[more]
A0A6H5KQ63_9PHAE	2.680e-26	46.62	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5JGX2_9PHAE	3.340e-26	42.86	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	GENE3D	3.60.10.10		coord: 7..150 e-value: 4.4E-14 score: 54.5
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	SUPERFAMILY	56219	DNase I-like	coord: 14..148
IPR005135	Endonuclease/exonuclease/phosphatase	PFAM	PF03372	Exo_endo_phos	coord: 13..141 e-value: 2.9E-6 score: 27.0

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig14320	contig	H-elongata_contig14320:6..455 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig14320.2982.1	mRNA_H-elongata_contig14320.2982.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig14320 6..479 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig14320.2982.1 ID=prot_H-elongata_contig14320.2982.1|Name=mRNA_H-elongata_contig14320.2982.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=150bp
MAVDGKHGVGRALDVLNIYDRLGCDVIGLQETRRSGHSAFNQAGYSVFCS
GECGGENGGKKGQGGVGLAIRTSITRAARPPEFISDRLLKVTLELRGRAK
AITFLVAYAPTETHNASNKHAFWTSLDRAVEEVPRHEQLFVLMDANARTG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036691	Endo/exonu/phosph_ase_sf
IPR005135	Endo/exonuclease/phosphatase