prot_H-elongata_contig142979.2969.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig142979.2969.1
Unique Nameprot_H-elongata_contig142979.2969.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length67
Homology
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BLAST of mRNA_H-elongata_contig142979.2969.1 vs. uniprot
Match: A0A6H5KND2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KND2_9PHAE)

HSP 1 Score: 46.6 bits (109), Expect = 9.140e-5
Identity = 24/34 (70.59%), Postives = 28/34 (82.35%), Query Frame = 0 
Query:   16 RRGLFWRIYRMDEESKKKLAELLRFILERNDYYA 49
            RR LF R+YRM+E S  KLA+LLR ILERND+YA
Sbjct:   81 RRKLFRRMYRMEEHSFNKLADLLRPILERNDFYA 114
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig142979.2969.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KND2_9PHAE9.140e-570.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig142979contigH-elongata_contig142979:614..1255 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig142979.2969.1mRNA_H-elongata_contig142979.2969.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig142979 461..1255 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig142979.2969.1 ID=prot_H-elongata_contig142979.2969.1|Name=mRNA_H-elongata_contig142979.2969.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=67bp
MARGDCCGRSTGWTCRRGLFWRIYRMDEESKKKLAELLRFILERNDYYAI
AQAKRPHHRPLPSAQFL
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