prot_H-elongata_contig142874.2965.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig142874.2965.1
Unique Nameprot_H-elongata_contig142874.2965.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length157
Homology
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BLAST of mRNA_H-elongata_contig142874.2965.1 vs. uniprot
Match: D8LMT5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMT5_ECTSI)

HSP 1 Score: 155 bits (391), Expect = 2.110e-42
Identity = 85/173 (49.13%), Postives = 104/173 (60.12%), Query Frame = 0 
Query:    1 MNSRSTMARLSPVAIMHAKSGGMGHRGGGIYTEACGCTYHVRDDARVVYFDDPVMSDVEAI-------TDLRCG-----------PLRRYLCGSRGQAVRVQSRACCGLCVRSRGL---PCIPSCCICLCKPGVLSYDLPVKDAVDAAAKIKQARDNALTRMWRENDAHAAVP 152
            M SR ++AR++     H         G G Y+ ACGCT+HVRDDARV+YFDDP + D+  +       +   CG             R+ LCG RGQAVRVQSR CCG CVR+RGL   PC+PSCC C C+   L YD+P KDAV AA KI  AR+NALT+M    +A AAVP
Sbjct:  271 MGSRPSVARVASADSAH---------GNGQYSGACGCTFHVRDDARVLYFDDPTLEDMTPVFPGGGGCSRFCCGRRPSTGARLMAEARQLLCGGRGQAVRVQSRVCCGACVRARGLLGLPCVPSCCACACRSATLRYDMPAKDAVTAATKIWHARNNALTKMREVGEAQAAVP 434
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig142874.2965.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LMT5_ECTSI2.110e-4249.13Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig142874contigH-elongata_contig142874:496..1187 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig142874.2965.1mRNA_H-elongata_contig142874.2965.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig142874 490..1187 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig142874.2965.1 ID=prot_H-elongata_contig142874.2965.1|Name=mRNA_H-elongata_contig142874.2965.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=157bp
MNSRSTMARLSPVAIMHAKSGGMGHRGGGIYTEACGCTYHVRDDARVVYF
DDPVMSDVEAITDLRCGPLRRYLCGSRGQAVRVQSRACCGLCVRSRGLPC
IPSCCICLCKPGVLSYDLPVKDAVDAAAKIKQARDNALTRMWRENDAHAA
VPRPKG*
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