prot_H-elongata_contig142658.2953.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig142658.2953.1
Unique Nameprot_H-elongata_contig142658.2953.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length63
Homology
BLAST of mRNA_H-elongata_contig142658.2953.1 vs. uniprot
Match: D8LD16_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD16_ECTSI)

HSP 1 Score: 100 bits (249), Expect = 2.290e-24
Identity = 44/57 (77.19%), Postives = 51/57 (89.47%), Query Frame = 0
Query:    7 FEKGDEVLYVRGSDPPLEGTVQKVHMEEYPPYYTVLISITGREKNTDAAHLRYKNGE 63
            FEKGDEVLY+RGSDPPL+G VQKVH+E+  PYYTVLI++TGREKNTD AHLR+K  E
Sbjct:   52 FEKGDEVLYIRGSDPPLDGVVQKVHLEDETPYYTVLIAVTGREKNTDRAHLRHKGAE 108          
BLAST of mRNA_H-elongata_contig142658.2953.1 vs. uniprot
Match: A0A6H5KW83_9PHAE (Arf-GAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW83_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 9.640e-22
Identity = 43/57 (75.44%), Postives = 49/57 (85.96%), Query Frame = 0
Query:    7 FEKGDEVLYVRGSDPPLEGTVQKVHMEEYPPYYTVLISITGREKNTDAAHLRYKNGE 63
            F  GDEVLY+RGSDPPL+G VQKVH+E+  PYYTVLI+ITGREKNTD AHLR+K  E
Sbjct:  698 FAPGDEVLYIRGSDPPLDGVVQKVHLEDETPYYTVLIAITGREKNTDRAHLRHKGAE 754          
BLAST of mRNA_H-elongata_contig142658.2953.1 vs. uniprot
Match: A0A7S3XLD8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XLD8_HETAK)

HSP 1 Score: 57.0 bits (136), Expect = 6.400e-8
Identity = 25/57 (43.86%), Postives = 36/57 (63.16%), Query Frame = 0
Query:    4 PQRFEKGDEVLYVRGSDPPLEGTVQKVHMEEYPPYYTVLISITGREKNTDAAHLRYK 60
            P +F+ G+EVLYV          + KVH EE PP++T+++S++G EKNT    LR K
Sbjct:  616 PPQFQNGEEVLYVDAEGGLQPARIAKVHNEEVPPFFTIVLSVSGMEKNTTLERLRKK 672          
BLAST of mRNA_H-elongata_contig142658.2953.1 vs. uniprot
Match: A0A7S4DB20_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DB20_HETAK)

HSP 1 Score: 53.1 bits (126), Expect = 6.210e-7
Identity = 25/53 (47.17%), Postives = 34/53 (64.15%), Query Frame = 0
Query:    5 QRFEKGDEVLYVRGSDPPLEGTVQKVHMEEYPPYYTVLISITGREKNTDAAHL 57
            Q+F +G+E+LY R S+ P    + KVH E  PPYY+V I  TGRE+ T   H+
Sbjct:   93 QQFVEGEEILY-RSSNGPEPARINKVHYESQPPYYSVHIYSTGRERQTSFGHI 144          
BLAST of mRNA_H-elongata_contig142658.2953.1 vs. uniprot
Match: A0A7S3Y009_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y009_HETAK)

HSP 1 Score: 48.5 bits (114), Expect = 1.180e-5
Identity = 27/61 (44.26%), Postives = 35/61 (57.38%), Query Frame = 0
Query:    6 RFEKGDEVLY-VRGSDPPLEGTVQKVHME--EYPPYYTVLISITGREKNTDAAHLRYKNGE 63
            +F K D V+Y   G  PP E T+ KVH +  E  PYYT+++S  GREK T    L+ K  E
Sbjct:   15 QFRKRDFVIYQANGDTPPEEATIVKVHYDDIENGPYYTIVLSSDGREKQTVERKLKRKETE 75          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig142658.2953.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LD16_ECTSI2.290e-2477.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KW83_9PHAE9.640e-2275.44Arf-GAP domain-containing protein n=1 Tax=Ectocarp... [more]
A0A7S3XLD8_HETAK6.400e-843.86Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S4DB20_HETAK6.210e-747.17Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S3Y009_HETAK1.180e-544.26Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig142658contigH-elongata_contig142658:1034..1222 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig142658.2953.1mRNA_H-elongata_contig142658.2953.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig142658 1034..1222 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig142658.2953.1 ID=prot_H-elongata_contig142658.2953.1|Name=mRNA_H-elongata_contig142658.2953.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=63bp
PSPPQRFEKGDEVLYVRGSDPPLEGTVQKVHMEEYPPYYTVLISITGREK
NTDAAHLRYKNGE
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