prot_H-elongata_contig142620.2950.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig142620.2950.1
Unique Nameprot_H-elongata_contig142620.2950.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length122
Homology
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BLAST of mRNA_H-elongata_contig142620.2950.1 vs. uniprot
Match: D8LBD4_ECTSI (PNPLA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBD4_ECTSI)

HSP 1 Score: 181 bits (460), Expect = 1.730e-54
Identity = 81/113 (71.68%), Postives = 99/113 (87.61%), Query Frame = 0 
Query:    1 MNVRGKATVDGFFAMPKAYFGSPEIPSADQIVRVTVFPTTAVEMHSQQPGDVISPDLLDRYESGRFFELVNYALNPASEDVVEELFQAGFESGSVWCGRYGDGYRRRHEEKYA 113
            M VRG+ TVDGFFAMP+A FG+P+IP+AD++VR+TVFPTT+V M S +PGD+ISPDLLDRY+SGRF EL+NYALNP ++ V EELF AGFESG VWC +YG+ YRRRHEEKY+
Sbjct:  193 MQVRGQPTVDGFFAMPRAQFGAPDIPTADEVVRITVFPTTSVPMQSDKPGDLISPDLLDRYQSGRFMELLNYALNPGNDFVQEELFNAGFESGGVWCDKYGEDYRRRHEEKYS 305
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig142620.2950.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LBD4_ECTSI1.730e-5471.68PNPLA domain-containing protein n=2 Tax=Ectocarpus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig142620contigH-elongata_contig142620:374..1339 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig142620.2950.1mRNA_H-elongata_contig142620.2950.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig142620 2..1339 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig142620.2950.1 ID=prot_H-elongata_contig142620.2950.1|Name=mRNA_H-elongata_contig142620.2950.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=122bp
MNVRGKATVDGFFAMPKAYFGSPEIPSADQIVRVTVFPTTAVEMHSQQPG
DVISPDLLDRYESGRFFELVNYALNPASEDVVEELFQAGFESGSVWCGRY
GDGYRRRHEEKYAGSVNGRPL*
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