prot_H-elongata_contig14262.2949.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig14262.2949.1
Unique Nameprot_H-elongata_contig14262.2949.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length274
Homology
BLAST of mRNA_H-elongata_contig14262.2949.1 vs. uniprot
Match: D8LNE9_ECTSI (Ferredoxin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNE9_ECTSI)

HSP 1 Score: 333 bits (854), Expect = 2.830e-111
Identity = 162/227 (71.37%), Postives = 194/227 (85.46%), Query Frame = 0
Query:   43 SKTTVKKLEIVKSKLVREPTLGIQLEEVARGGDGRGLVLVSGVEPGGNAEASGQVFVGDTICWVGVEPTRMTRVEALDWDQTVSALGTFADVREITIVCKRLVKRKTINVQFELQDSNKDYDIKTGSNLRGEMIRLGVPVYDPKTLRYDQPYATGNCAGEGICGTCFVEVQEGAELLTPADREEEMLISNGNLPLRWRLSCKTIVGRENVEGTVRVKAVPQTEWREQ 269
            SK T   +E+VK ++ R+P+LG+QLEEVARGGDGRGLVLV+G+EPGGNAEASG++ VGDT+C  G+E   M+RVEALDWDQTVS LG+FA+  EI +V KRLVKR++INVQFEL   ++D++IK GSNLRGEMIRL VPVYDP+T R+DQPYATGNCAGEG CGTCFVEVQ+GA+LLT  D+EE ML+S GNLP+RWRLSCK IVG+EN  GTVR+KAVPQ EWR Q
Sbjct:  109 SKDTDYAIEVVKVQMQRKPSLGMQLEEVARGGDGRGLVLVAGLEPGGNAEASGKICVGDTLCSAGIEGD-MSRVEALDWDQTVSVLGSFAEESEIVLVIKRLVKRESINVQFELPSGSRDHEIKAGSNLRGEMIRLDVPVYDPRTKRFDQPYATGNCAGEGTCGTCFVEVQQGADLLTSPDQEELMLLSRGNLPVRWRLSCKVIVGKENKAGTVRLKAVPQAEWRSQ 334          
BLAST of mRNA_H-elongata_contig14262.2949.1 vs. uniprot
Match: A0A836CRA8_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CRA8_9STRA)

HSP 1 Score: 217 bits (553), Expect = 1.890e-66
Identity = 117/220 (53.18%), Postives = 149/220 (67.73%), Query Frame = 0
Query:   59 REPTLGIQLEEVARGGDGRGLVLVSGVEPGGNAEASGQVFVGDTICWVGVEPTR-MTRVEALDWDQTVSALGTFADVREITIVCKRLVKRKTINVQFE-----------LQDSNKDYDIKTGSNLRGEMIRLGVPVYDPKTLRYDQPYATGNCAGEGICGTCFVEVQEGAELLTPADREEEMLISNGNLPLRWRLSCKTIVGRENVEGTVRVKAVPQTEW 266
            R+P  GI++         RGLVL+  V  GGNA  SG +  GDT+ +VG E  R MTRVE  D+D TV+ALG +AD+ EIT+V KRLV+RKT+ V FE           ++   +   +  GSNLR EMIR  +PVYD KT R+DQPYATGNC GEGICGTCFVEVQEGAELL+P D  E M++ N  LP RWRLSC+T+VG +N  G VR++++PQ+ +
Sbjct:   68 RDPAFGIEIV--------RGLVLIGDV--GGNAAESGLINTGDTLTYVGNEAARDMTRVEGQDYDTTVAALGKYADLAEITLVLKRLVQRKTLEVTFETPTAYAEDGTAVEWGGQGVQMLAGSNLRSEMIRRDIPVYDAKTRRFDQPYATGNCGGEGICGTCFVEVQEGAELLSPPDGLENMVMRN--LPRRWRLSCRTVVGGKNEAGQVRLRSIPQSAY 275          
BLAST of mRNA_H-elongata_contig14262.2949.1 vs. uniprot
Match: A0A7S4DIM7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DIM7_HETAK)

HSP 1 Score: 213 bits (543), Expect = 1.440e-64
Identity = 113/217 (52.07%), Postives = 144/217 (66.36%), Query Frame = 0
Query:   50 LEIVKSKLVREPTLGIQLEEVARGGDGRGLVLVSGVEPGGNAEASGQVFVGDTICWVGVEPTRMTRVEALDWDQTVSALGTFADVREITIVCKRLVKRKTINVQFELQD-SNKDYDIKTGSNLRGEMIRLGVPVYDPKTLRYDQPYATGNCAGEGICGTCFVEVQEGAELLTPADREEEMLISNGNLPLRWRLSCKTIVGRENVEGTVRVKAVPQTE 265
            +EI K+++ RE  LG+ L E+  G DGRGLVLV  V  GGNA  +GQ  VGD + WVG EP  MTRVE LD+D T++ALG +AD   +T+V KRLV+R+ + V     D S    ++  GS LRGEM+R G+ VYDP   R+DQPY TGNC GEG+CGTC V V EG ELL+  DR E M++     P R+RLSC+TIVG  N  G V +K++P  E
Sbjct:   99 IEIAKARVSREGGLGLGLSEMMAGRDGRGLVLVEDVAEGGNAATTGQFRVGDALSWVGEEPGDMTRVEGLDFDGTLAALGKYADREAVTLVAKRLVRRQPLEVTLIQPDGSEAKLEMLAGSVLRGEMLRQGLQVYDPSQKRFDQPYVTGNCGGEGLCGTCLVAVLEGKELLSLPDRVEAMVLEKR--PARYRLSCRTIVGVTNQPGKVVLKSMPTLE 313          
BLAST of mRNA_H-elongata_contig14262.2949.1 vs. uniprot
Match: A0A7S2V297_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V297_9STRA)

HSP 1 Score: 195 bits (496), Expect = 5.880e-59
Identity = 104/204 (50.98%), Postives = 138/204 (67.65%), Query Frame = 0
Query:   77 RGLVLVSGVEPGGNAEASGQVFVGDTICWVGVEPTRMTR----VEALDWDQTVSALGTFADV---REITIVCKRLVKRKTINVQFELQDSN-KDYDIKTGSNLRGEMIRLGVP--VYDPKTLRYDQPYATGNCAGEGICGTCFVEVQEGAELLTPADREEEMLISNGNLPLRWRLSCKTIVGRENVEGTVRVKAVPQTEWREQR 270
            RGLVLV  + PGGNA  S ++ VGDT+C    +PT   R    +EA+D D T+  LG  +     +++ ++ KRLVKR+ +NV+  L D   K   + +GSNLRGEMIR G+P  +YDP+T RYDQP+ TGNC GEGICGTC +EV +G E+L+ AD  E ML+ N   P+RWRLSC+T VG +N  G+V+V+AVPQ E RE R
Sbjct:    1 RGLVLVKDLAPGGNAALSAKIRVGDTLCRAA-DPTVGARSVVSLEAVDLDGTLQNLGALSFASRQKQLVLIFKRLVKREMVNVKIALPDGGEKTLQMLSGSNLRGEMIRQGLPEYIYDPETKRYDQPFITGNCGGEGICGTCLIEVMDGPEMLSEADNLENMLLENQ--PIRWRLSCRTFVGPDNKSGSVKVRAVPQKEMRESR 201          
BLAST of mRNA_H-elongata_contig14262.2949.1 vs. uniprot
Match: A0A4D9CWU2_9STRA (PDZ domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CWU2_9STRA)

HSP 1 Score: 182 bits (463), Expect = 6.420e-53
Identity = 109/239 (45.61%), Postives = 139/239 (58.16%), Query Frame = 0
Query:   43 SKTTVKKLEIVKSKL-VREPTLGIQLEEVARGGDGRGLVLVSGVEPGGNAEAS----GQVFVGDTICWVGVEPTRMTRVEALDWDQTVSALGTFADVRE--ITIVCKRLVKRKTINVQF-------ELQDSNKDYD----IKTGSNLRGEMIRLGVPVYDPKTLRYDQPYATGNCAGEGICGTCFVEVQEGAELLTPADREEEMLISNGNLPLRWRLSCKTIVGRENVEGTVRVKAVPQ 263
            SK     +EI K  + + E  +G+ LEE+ RG DGRG VLVS + P GNA  +    G++ VGD IC++G EP  M R E LD++QT+ AL  F +     IT+V KRLV R +++V         E     K +     +  GS LR E++R G+PVY   TLR+DQPY TGNC GEGICGTC V+V EG ELL   D  E M+         WRLSC+ IVG  N  GTVR K +PQ
Sbjct:   40 SKDVAYAVEIAKVDIPLGEGGIGLGLEELRRGQDGRGCVLVSSLPPEGNAAQAAGDDGKIRVGDMICYLGQEPRGMVRTEGLDFEQTMGALRRFLETGAPAITLVLKRLVFRASLDVSLSYTPGPDEESQGRKAWTQTLPMLAGSQLRKELLRAGLPVYSQDTLRFDQPYVTGNCGGEGICGTCLVQVLEGKELLNEKDEVEAMVTRKWGAA-NWRLSCRVIVGATNTPGTVRFKLMPQ 277          
BLAST of mRNA_H-elongata_contig14262.2949.1 vs. uniprot
Match: A0A7R9YBT6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBT6_9STRA)

HSP 1 Score: 162 bits (411), Expect = 9.240e-45
Identity = 94/223 (42.15%), Postives = 132/223 (59.19%), Query Frame = 0
Query:   50 LEIVKSKLVREPTLGIQLEEVARGGD---GRGLVLVSGVEPGGNAEASG-QVFVGDTICWVGVEPTRMTRVEALDWDQTVSAL-GTFADVREITIVCKRLVKRKTINVQFELQDSNKD-YDIKTGSNLRGEMIRLGVPVYDPKTLRYDQPYATGNCAGEGICGTCFVEVQEGAELLTPADREEEMLISNGNLPLRWRLSCKTIVGRENVEGTVRVKAVPQTEW 266
            L++VK+ + R+P+LGI L E+    D    R LVLV G+E  GNA A G  + VGD I  +          E  D+D  +  + G      E+T+V  RLV+R  + + +EL + ++       GSNLRG  ++ GV +YD +T R+D PYATG+CAGEG+CGTC V V  G +LL+PADR E  LI  G  P+ WR +C+  VG +N EGTV V+  PQ+ +
Sbjct:   90 LKVVKTSVKRKPSLGIVLNEMVDASDPSADRALVLVGGLE--GNAAAEGVDLEVGDVITAIADGSGGYISTEGRDYDFLIDTIVGVDPGAEELTLVVNRLVERAMVTINYELPNGDRSSVQAPAGSNLRGIFLQEGVRLYDERTRRFDMPYATGDCAGEGLCGTCLVNVWSGEDLLSPADRNEA-LICKGR-PMGWRAACRVFVGADNQEGTVEVRLQPQSRF 308          
BLAST of mRNA_H-elongata_contig14262.2949.1 vs. uniprot
Match: A0A7S3P6U2_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P6U2_9STRA)

HSP 1 Score: 160 bits (406), Expect = 2.730e-43
Identity = 99/242 (40.91%), Postives = 139/242 (57.44%), Query Frame = 0
Query:   41 FHSKTTVKKLEIVKSKLV---REPTLGIQLEEVARGGDGRGLVLVSGVEPGGNAEASGQVFVGDTICWVGVEPTRMT-RVEALDWDQTVSALGTFADVRE--------ITIVCKRLVKRKTINVQFELQDSN-KDYDIKTGSNLRGEMIRLGVPVYDPKTLRYDQPYATGNCAGEGICGTCFVEVQEGAELLTPADREEEMLISNGNLPLRWRLSCKTIVGRENVEGTVRVKAVPQTEWREQ 269
            F S+  V  LE++++++      P+LG+ L E+A   DGRGLVLVS V        S  + VGD I  V      +  R   L++D+TV A+G   DV+E        + +   RLVKR TI VQ      N    +   G NLR  ++R  + +Y+ KT R+D PYATG+CAGEG+CGTC V V EG +LL P D  EE LI+ G  PL WR SC+T+VG  N  GT++V+  PQ+++ ++
Sbjct:  143 FDSQDPVYGLEVIQTEIPLSSENPSLGLVLTEMAGNKDGRGLVLVSEVTGNAKNARSSPILVGDVITGVRTSDGSLRERTTGLNYDRTVEAVG---DVKEAALKGDGTLHLELNRLVKRATIQVQVVQPGKNVTTIEALAGENLRRLLLRKDIRLYNRKTKRFDMPYATGDCAGEGLCGTCLVAVNEGMDLLNPKDGAEE-LITRGR-PLSWRASCRTVVGSNNEGGTIQVRVQPQSDFEDE 379          
BLAST of mRNA_H-elongata_contig14262.2949.1 vs. uniprot
Match: B7G5I1_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G5I1_PHATC)

HSP 1 Score: 144 bits (363), Expect = 9.990e-38
Identity = 96/238 (40.34%), Postives = 136/238 (57.14%), Query Frame = 0
Query:   41 FHSKTTVKKLEIVKSKL-VREPTLGIQLEEVARGGDGRGLVLVSGVEPGGNAEASGQ-VFVGDTICWVGV-EPTRMTRVEALDWDQTVSALGTFADVRE---ITIVCKRLVKRKTINVQFELQDSNKDYDI---KTGSNLRGEMIRLGVPVYDPKTLRYDQPYATGNCAGEGICGTCFVEVQEGAELLTPADREEEMLISNGNLPLRWRLSCKTIVGRENVEGTVRVKAVPQTEWREQ 269
            F SK     LE+V + + V    LG+ L E+A   DGRGLV+VS +  G  A+A+ Q + VGDTI  V   +     RV A ++D+TV A+G   +      IT+   RL+KR  + V+ E+ D +    +     G NLR   +R  + +YD +T R+DQP+ TGNC G+G+CGTC V V +G +LL P D   E+ I+ G  P  WR SC+T VG  NV GT+R+   PQ+E  E+
Sbjct:   70 FDSKDNRYGLEVVHTNIDVGNDGLGLVLTEMAGSPDGRGLVMVSKIT-GNAAKANPQAIHVGDTITGVMANDGVLKERVTAFNYDKTVEAIGRAKESSTDGTITLELNRLIKR--LPVRVEIDDGSGHVQVIEALAGENLRRMFMRKQLKLYDERTRRFDQPFNTGNCGGDGVCGTCLVNVLQGMDLLNPKD-SHEVFITKGRPP-SWRASCRTTVGFNNVGGTLRISLHPQSELPEE 302          
BLAST of mRNA_H-elongata_contig14262.2949.1 vs. uniprot
Match: A0A7S1ZCW4_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZCW4_TRICV)

HSP 1 Score: 85.5 bits (210), Expect = 1.500e-15
Identity = 76/240 (31.67%), Postives = 116/240 (48.33%), Query Frame = 0
Query:   59 REPTLGIQLEEVARG-GDGRGLVLVSGVEPGGNAEASGQVFVGDTICWV-------------GVEPTR-MTRVEALDWDQTVSALGTF-ADVREITIVCKRLVKRKTINVQFELQ--------DSNKDYDIKTGSNLRGEMIRLGVPVYDPKTLRYDQPYATGNCAGEGICGTCFVEVQEGAELLTPADREEEMLISNGNLPLRWRLSCKTIVGRENVEGTVRVKAVPQTEW-REQRANK 273
            R+  LG++L E+A G  DG G+ +V+ V  GGNAE +G V  GD+I  V              VE T      E  D+D T++AL  F A+V E+ +  KRL +   + V  E          D+ +  ++  G NLR  ++  G+ + D K  + D       C G+     C V V  G +LL P    EE L++      + RLSCK+ VG    EG++R++ +   +W +E R N+
Sbjct:  115 RDGGLGMELLEIAGGRDDGYGITVVTAVTEGGNAERAG-VVPGDSIATVVGAARAVSSGGLLDVEETEEAVNCECRDFDSTIAALTAFPAEVEELNLGIKRLRRWPKVKVVVEYPPSQCAEGVDNKETLELFAGENLRRALLNRGIVMEDSKAPKCDF------CGGK-----CTVSVDVGFDLLNPMSTTEEKLMAKNP---KCRLSCKSTVGYNMQEGSMRLR-INLNQWSKEDRRNR 338          
BLAST of mRNA_H-elongata_contig14262.2949.1 vs. uniprot
Match: A0A383VEF3_TETOB (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VEF3_TETOB)

HSP 1 Score: 66.6 bits (161), Expect = 5.330e-10
Identity = 44/124 (35.48%), Postives = 63/124 (50.81%), Query Frame = 0
Query:  140 VCKRLVKRKTINVQFELQDSNKDYDIKTGSNLRGEMIRLGVPVYDPKTLRYDQPYATGNCAGEGICGTCFVEVQEGAELLTPADREEEMLISNGNLPLRWRLSCKTIVGRENVEGTVRVKAVPQ 263
            VC +     TI V+F +++  +   I+    + GE  +L   + D K   Y        C G G CGTC V+VQEGAELL+     E+  ++    P  WRL+C+TIVG     GTV ++  PQ
Sbjct:   33 VCVQASSEPTITVKF-VEEGQQPVTIEC---ISGEE-QLRAAMLDNKVDLYTTWGKLWQCGGGGQCGTCIVQVQEGAELLSERTATEDKKLNKK--PETWRLACQTIVGDGTNSGTVVIQTKPQ 149          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14262.2949.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNE9_ECTSI2.830e-11171.37Ferredoxin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8L... [more]
A0A836CRA8_9STRA1.890e-6653.182Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A7S4DIM7_HETAK1.440e-6452.07Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2V297_9STRA5.880e-5950.98Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A4D9CWU2_9STRA6.420e-5345.61PDZ domain-containing protein n=3 Tax=Monodopsidac... [more]
A0A7R9YBT6_9STRA9.240e-4542.15Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S3P6U2_9STRA2.730e-4340.91Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
B7G5I1_PHATC9.990e-3840.34Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S1ZCW4_TRICV1.500e-1531.67Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A383VEF3_TETOB5.330e-1035.482Fe-2S ferredoxin-type domain-containing protein n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPFAMPF00111Fer2coord: 197..247
e-value: 1.6E-6
score: 28.0
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPROSITEPS510852FE2S_FER_2coord: 150..264
score: 8.629
NoneNo IPR availableGENE3D2.30.42.10coord: 37..131
e-value: 2.7E-6
score: 28.9
NoneNo IPR availablePANTHERPTHR23426:SF27PHOTOSYNTHETIC NDH SUBUNIT OF SUBCOMPLEX B 3, CHLOROPLASTICcoord: 167..267
NoneNo IPR availablePANTHERPTHR23426FERREDOXIN/ADRENODOXINcoord: 167..267
IPR012675Beta-grasp domain superfamilyGENE3D3.10.20.30coord: 147..267
e-value: 4.8E-16
score: 60.5
IPR001478PDZ domainPROSITEPS50106PDZcoord: 49..128
score: 9.35
IPR036034PDZ superfamilySUPERFAMILY50156PDZ domain-likecoord: 23..112
IPR0360102Fe-2S ferredoxin-like superfamilySUPERFAMILY542922Fe-2S ferredoxin-likecoord: 155..253

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig14262contigH-elongata_contig14262:5599..7527 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig14262.2949.1mRNA_H-elongata_contig14262.2949.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig14262 4361..7598 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig14262.2949.1 ID=prot_H-elongata_contig14262.2949.1|Name=mRNA_H-elongata_contig14262.2949.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=274bp
MHTLHAHICISHVTTDVHHGRTIQYPHSVPSCCKRFLKKMFHSKTTVKKL
EIVKSKLVREPTLGIQLEEVARGGDGRGLVLVSGVEPGGNAEASGQVFVG
DTICWVGVEPTRMTRVEALDWDQTVSALGTFADVREITIVCKRLVKRKTI
NVQFELQDSNKDYDIKTGSNLRGEMIRLGVPVYDPKTLRYDQPYATGNCA
GEGICGTCFVEVQEGAELLTPADREEEMLISNGNLPLRWRLSCKTIVGRE
NVEGTVRVKAVPQTEWREQRANK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0010412Fe-2S_ferredoxin-type
IPR012675Beta-grasp_dom_sf
IPR001478PDZ
IPR036034PDZ_sf
IPR0360102Fe-2S_ferredoxin-like_sf