prot_H-elongata_contig142299.2927.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig142299.2927.1
Unique Name	prot_H-elongata_contig142299.2927.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	107

Homology

[Close]

BLAST of mRNA_H-elongata_contig142299.2927.1 vs. uniprot
Match: A0A6H5JRE2_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRE2_9PHAE)

HSP 1 Score: 90.1 bits (222), Expect = 2.320e-21
Identity = 44/98 (44.90%), Postives = 65/98 (66.33%), Query Frame = 0

Query:    1 MNLEGKQDRSSVYIKDEDGILLRDAVLIRERWDRWFQTLLNTKSPEHEPNITESPDQWPENTPLNIQPTMQELTDAIRSSVSGKAVGPDGVSIDLFKV 98
            +++EGK+  +S  IKDEDG +LRD  L R+RW RWF  LLNT+SP  + + T+   QWP   PL+  P++ E+ +A+R   + KAVGPD +  +L K+
Sbjct:    2 IDVEGKRPLTSQNIKDEDGKVLRDPTLTRQRWARWFHKLLNTRSPTIDLHATDRVKQWPTCVPLDDIPSLFEVEEAVRGMANRKAVGPDDLPAELIKL 99

[Close]

BLAST of mRNA_H-elongata_contig142299.2927.1 vs. uniprot
Match: A0A6H5JFE9_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFE9_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 2.430e-21
Identity = 48/106 (45.28%), Postives = 69/106 (65.09%), Query Frame = 0

Query:    1 MNLEGKQDRSSVYIKDEDGILLRDAVLIRERWDRWFQTLLNTKSPEHEPNITESPDQWPENTPLNIQPTMQELTDAIRSSVSGKAVGPDGVSIDLFKVALTGDPAL 106
            +++EGK+  +S  IKDEDG +LRD  LIR+RW RWF  LLNTKSP  + +  +   +WP   PL+  P++ E+ +A+R   + KAVGPD +  +L K+ L GD  L
Sbjct:   47 IDVEGKRSFTSRSIKDEDGKVLRDPTLIRQRWARWFHKLLNTKSPTIDLHAADKVKRWPTCVPLDDIPSLLEVEEAVREMANRKAVGPDILPAELIKLFLDGDQGL 152

[Close]

BLAST of mRNA_H-elongata_contig142299.2927.1 vs. uniprot
Match: A0A6H5KE31_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE31_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 3.420e-21
Identity = 48/103 (46.60%), Postives = 68/103 (66.02%), Query Frame = 0

Query:    1 MNLEGKQDRSSVYIKDEDGILLRDAVLIRERWDRWFQTLLNTKSPEHEPNITESPDQWPENTPLNIQPTMQELTDAIRSSVSGKAVGPDGVSIDLFKVALTGD 103
            +++EGK+  +S  IKDEDG +LRD  L R+RW RWF  LLNTKSP  + + T+   QWP   PL+  P++ E+ +A+R   + KAVGPD +  +L K+ L GD
Sbjct:    2 LDVEGKRPLTSQNIKDEDGKVLRDPTLTRQRWARWFHKLLNTKSPTIDLHATDRVKQWPTCVPLDDIPSLFEVEEAVRGMANRKAVGPDDLPAELIKLFLDGD 104

[Close]

BLAST of mRNA_H-elongata_contig142299.2927.1 vs. uniprot
Match: A0A6H5JY74_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY74_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 3.510e-21
Identity = 49/106 (46.23%), Postives = 69/106 (65.09%), Query Frame = 0

Query:    1 MNLEGKQDRSSVYIKDEDGILLRDAVLIRERWDRWFQTLLNTKSPEHEPNITESPDQWPENTPLNIQPTMQELTDAIRSSVSGKAVGPDGVSIDLFKVALTGDPAL 106
            +++EGK+  +S  IKDEDG +LRD  L R+RW RWF  LLNTKSP  + + T+   QWP   PL+  P++ E+ +A+R   + KAVGPD +  +L K+ L GD  L
Sbjct:  300 IDVEGKRPFTSQNIKDEDGKVLRDPTLTRQRWARWFHKLLNTKSPTIDLHATDRVKQWPTCVPLDDIPSLFEVEEAVRGMANRKAVGPDDLPAELIKLFLDGDRGL 405

[Close]

BLAST of mRNA_H-elongata_contig142299.2927.1 vs. uniprot
Match: A0A6H5KKB2_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKB2_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 5.680e-21
Identity = 48/103 (46.60%), Postives = 68/103 (66.02%), Query Frame = 0

Query:    1 MNLEGKQDRSSVYIKDEDGILLRDAVLIRERWDRWFQTLLNTKSPEHEPNITESPDQWPENTPLNIQPTMQELTDAIRSSVSGKAVGPDGVSIDLFKVALTGD 103
            +++EGK+  +S  IKDEDG +LRD  L R+RW RWF  LLNTKSP  + + T+   QWP   PL+  P++ E+ +A+R   + KAVGPD +  +L K+ L GD
Sbjct:    2 IDVEGKRPLTSQNIKDEDGKVLRDPTLTRQRWARWFHKLLNTKSPTIDLHATDRVKQWPTCVPLDDIPSLFEVEEAVRGMANRKAVGPDDLPAELIKLFLDGD 104

[Close]

BLAST of mRNA_H-elongata_contig142299.2927.1 vs. uniprot
Match: A0A6H5K8Z5_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Z5_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 5.820e-21
Identity = 48/103 (46.60%), Postives = 68/103 (66.02%), Query Frame = 0

Query:    1 MNLEGKQDRSSVYIKDEDGILLRDAVLIRERWDRWFQTLLNTKSPEHEPNITESPDQWPENTPLNIQPTMQELTDAIRSSVSGKAVGPDGVSIDLFKVALTGD 103
            +++EGK+  +S  IKDEDG +LRD  L R+RW RWF  LLNTKSP  + + T+   QWP   PL+  P++ E+ +A+R   + KAVGPD +  +L K+ L GD
Sbjct:  280 IDVEGKRPLTSQNIKDEDGKVLRDPTLTRQRWARWFHKLLNTKSPTIDLHATDRVKQWPTCVPLDDIPSLFEVEEAVRGMANRKAVGPDDLPAELIKLFLDGD 382

[Close]

BLAST of mRNA_H-elongata_contig142299.2927.1 vs. uniprot
Match: A0A6H5JUB0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUB0_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 5.840e-21
Identity = 48/103 (46.60%), Postives = 68/103 (66.02%), Query Frame = 0

Query:    1 MNLEGKQDRSSVYIKDEDGILLRDAVLIRERWDRWFQTLLNTKSPEHEPNITESPDQWPENTPLNIQPTMQELTDAIRSSVSGKAVGPDGVSIDLFKVALTGD 103
            +++EGK+  +S  IKDEDG +LRD  L R+RW RWF  LLNTKSP  + + T+   QWP   PL+  P++ E+ +A+R   + KAVGPD +  +L K+ L GD
Sbjct:   65 IDVEGKRPLTSQNIKDEDGKVLRDPTLTRQRWARWFHKLLNTKSPTIDLHATDRVKQWPTCVPLDDIPSLFEVEEAVRGMANRKAVGPDDLPAELIKLFLDGD 167

[Close]

BLAST of mRNA_H-elongata_contig142299.2927.1 vs. uniprot
Match: A0A6H5KC90_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC90_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 5.850e-21
Identity = 48/103 (46.60%), Postives = 68/103 (66.02%), Query Frame = 0

Query:    1 MNLEGKQDRSSVYIKDEDGILLRDAVLIRERWDRWFQTLLNTKSPEHEPNITESPDQWPENTPLNIQPTMQELTDAIRSSVSGKAVGPDGVSIDLFKVALTGD 103
            +++EGK+  +S  IKDEDG +LRD  L R+RW RWF  LLNTKSP  + + T+   QWP   PL+  P++ E+ +A+R   + KAVGPD +  +L K+ L GD
Sbjct:  418 IDVEGKRPLTSQNIKDEDGKVLRDPTLTRQRWARWFHKLLNTKSPTIDLHATDRVKQWPTCVPLDDIPSLFEVEEAVRGMANRKAVGPDDLPAELIKLFLDGD 520

[Close]

BLAST of mRNA_H-elongata_contig142299.2927.1 vs. uniprot
Match: A0A6H5JQH5_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQH5_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 5.880e-21
Identity = 48/103 (46.60%), Postives = 68/103 (66.02%), Query Frame = 0

Query:    1 MNLEGKQDRSSVYIKDEDGILLRDAVLIRERWDRWFQTLLNTKSPEHEPNITESPDQWPENTPLNIQPTMQELTDAIRSSVSGKAVGPDGVSIDLFKVALTGD 103
            +++EGK+  +S  IKDEDG +LRD  L R+RW RWF  LLNTKSP  + + T+   QWP   PL+  P++ E+ +A+R   + KAVGPD +  +L K+ L GD
Sbjct:  530 IDVEGKRPLTSQNIKDEDGKVLRDPTLTRQRWARWFHKLLNTKSPTIDLHATDRVKQWPTCVPLDDIPSLFEVEEAVRGMANRKAVGPDDLPAELIKLFLDGD 632

[Close]

BLAST of mRNA_H-elongata_contig142299.2927.1 vs. uniprot
Match: A0A6H5KDI8_9PHAE (Reverse transcriptase domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDI8_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 5.900e-21
Identity = 48/103 (46.60%), Postives = 68/103 (66.02%), Query Frame = 0

Query:    1 MNLEGKQDRSSVYIKDEDGILLRDAVLIRERWDRWFQTLLNTKSPEHEPNITESPDQWPENTPLNIQPTMQELTDAIRSSVSGKAVGPDGVSIDLFKVALTGD 103
            +++EGK+  +S  IKDEDG +LRD  L R+RW RWF  LLNTKSP  + + T+   QWP   PL+  P++ E+ +A+R   + KAVGPD +  +L K+ L GD
Sbjct:  651 IDVEGKRPLTSQNIKDEDGKVLRDPTLTRQRWARWFHKLLNTKSPTIDLHATDRVKQWPTCVPLDDIPSLFEVEEAVRGMANRKAVGPDDLPAELIKLFLDGD 753

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig142299.2927.1 vs. uniprot

BLAST of mRNA_H-elongata_contig142299.2927.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JRE2_9PHAE	2.320e-21	44.90	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5JFE9_9PHAE	2.430e-21	45.28	Reverse transcriptase domain-containing protein (F...	[more]
A0A6H5KE31_9PHAE	3.420e-21	46.60	Reverse transcriptase domain-containing protein (F...	[more]
A0A6H5JY74_9PHAE	3.510e-21	46.23	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KKB2_9PHAE	5.680e-21	46.60	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5K8Z5_9PHAE	5.820e-21	46.60	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5JUB0_9PHAE	5.840e-21	46.60	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KC90_9PHAE	5.850e-21	46.60	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5JQH5_9PHAE	5.880e-21	46.60	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5KDI8_9PHAE	5.900e-21	46.60	Reverse transcriptase domain-containing protein n=...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig142299	contig	H-elongata_contig142299:72..392 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig142299.2927.1	mRNA_H-elongata_contig142299.2927.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig142299 72..395 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig142299.2927.1 ID=prot_H-elongata_contig142299.2927.1|Name=mRNA_H-elongata_contig142299.2927.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=107bp
MNLEGKQDRSSVYIKDEDGILLRDAVLIRERWDRWFQTLLNTKSPEHEPN
ITESPDQWPENTPLNIQPTMQELTDAIRSSVSGKAVGPDGVSIDLFKVAL
TGDPAL*