prot_H-elongata_contig142156.2917.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig142156.2917.1
Unique Name	prot_H-elongata_contig142156.2917.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	145

Homology

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BLAST of mRNA_H-elongata_contig142156.2917.1 vs. uniprot
Match: A0A2S1PRW8_FUCSE (Putative argonaute n=1 Tax=Fucus serratus TaxID=87148 RepID=A0A2S1PRW8_FUCSE)

HSP 1 Score: 283 bits (724), Expect = 2.040e-87
Identity = 127/140 (90.71%), Postives = 137/140 (97.86%), Query Frame = 0

Query:    4 QVRAIEQACSSLQNGYRPTITFIVVQKRHHTRLFQPRKEDQDRSGNVFPGTVVETGICHPMEWDFYLMSHGGLQGTSRPAKYHVLWDENAFDSDSLQMLCYHLCFMYCRCTRSVSIPPAVYYAHLVAFRAQFFVNVSIDT 143
            +VRAIEQAC+SL++GYRP+ITFIVVQKRHHTRLFQPR+EDQD+SGNVFPGTVVETGICHPMEWDFYLMSHGGLQGTSRPAKYHVLWDEN FDSDSLQ+LCYHLCFMYCRCTRSVSIPPAVYYAHLVAFRAQFFVNV  ++
Sbjct:  798 EVRAIEQACASLESGYRPSITFIVVQKRHHTRLFQPRREDQDKSGNVFPGTVVETGICHPMEWDFYLMSHGGLQGTSRPAKYHVLWDENKFDSDSLQLLCYHLCFMYCRCTRSVSIPPAVYYAHLVAFRAQFFVNVGDES 937

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BLAST of mRNA_H-elongata_contig142156.2917.1 vs. uniprot
Match: D7FQK3_ECTSI (Argonaute 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQK3_ECTSI)

HSP 1 Score: 282 bits (722), Expect = 3.510e-87
Identity = 127/140 (90.71%), Postives = 136/140 (97.14%), Query Frame = 0

Query:    4 QVRAIEQACSSLQNGYRPTITFIVVQKRHHTRLFQPRKEDQDRSGNVFPGTVVETGICHPMEWDFYLMSHGGLQGTSRPAKYHVLWDENAFDSDSLQMLCYHLCFMYCRCTRSVSIPPAVYYAHLVAFRAQFFVNVSIDT 143
            +VRAIEQAC++L+ GYRPTITFIVVQKRHHTRLFQP ++DQD+SGNVFPGTVVETGICHPMEWDFYLMSHGGLQGTSRPAKYHVLWDENAFDSDSLQ+LCYHLCFMYCRCTRSVSIPPAVYYAHLVAFRAQFFVNV  D+
Sbjct:  789 EVRAIEQACAALEVGYRPTITFIVVQKRHHTRLFQPNRDDQDKSGNVFPGTVVETGICHPMEWDFYLMSHGGLQGTSRPAKYHVLWDENAFDSDSLQLLCYHLCFMYCRCTRSVSIPPAVYYAHLVAFRAQFFVNVGDDS 928

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BLAST of mRNA_H-elongata_contig142156.2917.1 vs. uniprot
Match: A0A2K3PG38_TRIPR (Argonaute protein n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3PG38_TRIPR)

HSP 1 Score: 204 bits (520), Expect = 9.220e-62
Identity = 91/143 (63.64%), Postives = 115/143 (80.42%), Query Frame = 0

Query:    1 LFEQVRAIEQACSSLQNGYRPTITFIVVQKRHHTRLFQPRKEDQDRSGNVFPGTVVETGICHPMEWDFYLMSHGGLQGTSRPAKYHVLWDENAFDSDSLQMLCYHLCFMYCRCTRSVSIPPAVYYAHLVAFRAQFFVNVSIDT 143
            L  +V AI +AC+S++NGY P ITF+VVQKRHHTRLF  R+E+ D+SGN+ PGTVV+T ICHP E+DFYL SH G+QGTSRPA YHVL+DEN F +D LQ L  +LC+ Y RCTRSVSI P  YYAHL+AFRA+++++ + DT
Sbjct:  260 LLYEVDAIRKACASIENGYLPPITFVVVQKRHHTRLFPVRREETDKSGNIMPGTVVDTNICHPREFDFYLNSHAGIQGTSRPAHYHVLFDENRFSADHLQSLTNNLCYTYARCTRSVSIVPPAYYAHLLAFRARYYLSDAADT 402

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BLAST of mRNA_H-elongata_contig142156.2917.1 vs. uniprot
Match: A0A4P9VYH5_9FUNG (Piwi domain-containing protein (Fragment) n=2 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4P9VYH5_9FUNG)

HSP 1 Score: 197 bits (502), Expect = 1.560e-61
Identity = 91/133 (68.42%), Postives = 105/133 (78.95%), Query Frame = 0

Query:    3 EQVRAIEQACSSLQNGYRPTITFIVVQKRHHTRLFQPRKEDQDRSGNVFPGTVVETGICHPMEWDFYLMSHGGLQGTSRPAKYHVLWDENAFDSDSLQMLCYHLCFMYCRCTRSVSIPPAVYYAHLVAFRAQF 135
            E+V AI +AC+ L+ GY PT TF++VQKRHH R F  RKED DRSGNV PGTVVETGI HP E+DFYL SH GLQGTS+P  YHVL+DEN F SD+LQ L Y LC++YCR TRSVS+ P  YYAHLVA RA+F
Sbjct:   97 EEVAAIRRACAILEAGYNPTTTFVIVQKRHHARFFPLRKEDADRSGNVLPGTVVETGITHPSEFDFYLASHPGLQGTSKPTHYHVLYDENRFTSDALQELTYRLCYLYCRATRSVSVCPPAYYAHLVAARARF 229

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BLAST of mRNA_H-elongata_contig142156.2917.1 vs. uniprot
Match: A0A2H5QNJ6_CITUN (Piwi domain-containing protein n=1 Tax=Citrus unshiu TaxID=55188 RepID=A0A2H5QNJ6_CITUN)

HSP 1 Score: 192 bits (489), Expect = 6.720e-60
Identity = 87/141 (61.70%), Postives = 108/141 (76.60%), Query Frame = 0

Query:    1 LFEQVRAIEQACSSLQNGYRPTITFIVVQKRHHTRLFQP---RKEDQDRSGNVFPGTVVETGICHPMEWDFYLMSHGGLQGTSRPAKYHVLWDENAFDSDSLQMLCYHLCFMYCRCTRSVSIPPAVYYAHLVAFRAQFFVN 138
            L  ++ AI QAC+SL+ GY P +TF+VVQKRHHTRLF     R++  DRSGN+ PGTVV+T ICHP E+DFYL SH G+QGTSRP  YHVL+DEN F +D LQ+L  +LC+ Y RCTRSVSI P  YYAHL AFRA++++ 
Sbjct:   26 LLHEMNAIRQACASLEEGYAPPVTFVVVQKRHHTRLFPADHNRRDLTDRSGNILPGTVVDTQICHPTEFDFYLNSHAGIQGTSRPTHYHVLYDENRFTADGLQVLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARYYIE 166

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BLAST of mRNA_H-elongata_contig142156.2917.1 vs. uniprot
Match: A0A1J3GMK6_NOCCA (Protein argonaute 5 (Fragment) n=2 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3GMK6_NOCCA)

HSP 1 Score: 190 bits (482), Expect = 1.110e-59
Identity = 87/142 (61.27%), Postives = 108/142 (76.06%), Query Frame = 0

Query:    4 QVRAIEQACSSLQNGYRPTITFIVVQKRHHTRLFQPR---KEDQDRSGNVFPGTVVETGICHPMEWDFYLMSHGGLQGTSRPAKYHVLWDENAFDSDSLQMLCYHLCFMYCRCTRSVSIPPAVYYAHLVAFRAQFFVNVSID 142
            +V AI +AC SLQ GY+P ITF++VQKRHHTR F  +   +E  D+SGN+ PGTVV+T ICHP E+DFYL SH G+QGTSRPA YHVL DENAF +D+LQML   LC+ + RCTRSVSI P  YYAHL AFRA++++   + 
Sbjct:    1 EVLAIRKACHSLQEGYQPRITFVIVQKRHHTRFFPAQHGHRETTDKSGNILPGTVVDTKICHPNEFDFYLNSHAGIQGTSRPAHYHVLLDENAFSADALQMLTNSLCYTFARCTRSVSIVPPAYYAHLAAFRARYYMESEMS 142

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BLAST of mRNA_H-elongata_contig142156.2917.1 vs. uniprot
Match: A0A446MKS1_TRITD (Piwi domain-containing protein n=2 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446MKS1_TRITD)

HSP 1 Score: 192 bits (489), Expect = 1.380e-59
Identity = 88/141 (62.41%), Postives = 107/141 (75.89%), Query Frame = 0

Query:    1 LFEQVRAIEQACSSLQNGYRPTITFIVVQKRHHTRLFQPRKEDQ---DRSGNVFPGTVVETGICHPMEWDFYLMSHGGLQGTSRPAKYHVLWDENAFDSDSLQMLCYHLCFMYCRCTRSVSIPPAVYYAHLVAFRAQFFVN 138
            L  ++ AI +AC+SL+  Y+P +TF+VVQKRHHTRLF     DQ   DRSGN+ PGTVV++ ICHP E+DFYL SH G+QGTSRPA YHVLWDEN F +D LQ L  +LC+ Y RCTRSVSI P  YYAHL AFRA+F++ 
Sbjct:   40 LLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHNDQRTVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYME 180

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BLAST of mRNA_H-elongata_contig142156.2917.1 vs. uniprot
Match: A0A446LC47_TRITD (Piwi domain-containing protein n=5 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446LC47_TRITD)

HSP 1 Score: 192 bits (489), Expect = 1.990e-59
Identity = 88/141 (62.41%), Postives = 107/141 (75.89%), Query Frame = 0

Query:    1 LFEQVRAIEQACSSLQNGYRPTITFIVVQKRHHTRLFQPRKEDQ---DRSGNVFPGTVVETGICHPMEWDFYLMSHGGLQGTSRPAKYHVLWDENAFDSDSLQMLCYHLCFMYCRCTRSVSIPPAVYYAHLVAFRAQFFVN 138
            L  ++ AI +AC+SL+  Y+P +TF+VVQKRHHTRLF     DQ   DRSGN+ PGTVV++ ICHP E+DFYL SH G+QGTSRPA YHVLWDEN F +D LQ L  +LC+ Y RCTRSVSI P  YYAHL AFRA+F++ 
Sbjct:   52 LLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHNDQRTVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYME 192

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BLAST of mRNA_H-elongata_contig142156.2917.1 vs. uniprot
Match: A0A6M2EQP3_9ROSI (Piwi domain-containing protein n=1 Tax=Populus davidiana TaxID=266767 RepID=A0A6M2EQP3_9ROSI)

HSP 1 Score: 190 bits (482), Expect = 2.640e-59
Identity = 85/137 (62.04%), Postives = 105/137 (76.64%), Query Frame = 0

Query:    5 VRAIEQACSSLQNGYRPTITFIVVQKRHHTRLF---QPRKEDQDRSGNVFPGTVVETGICHPMEWDFYLMSHGGLQGTSRPAKYHVLWDENAFDSDSLQMLCYHLCFMYCRCTRSVSIPPAVYYAHLVAFRAQFFVN 138
            ++AI QAC SL++GY P +TF+VVQKRHHTR F     R++  D+SGN+ PGTVV+T ICHP E+DFYL SH G+QGTSRP  YHVL+DEN F SD LQ L  +LC+ Y RCTRSVSI P  YYAHL AFRA++++ 
Sbjct:    1 MQAIRQACGSLEDGYGPRVTFVVVQKRHHTRFFPADHSRRDQTDKSGNILPGTVVDTAICHPTEFDFYLNSHAGIQGTSRPTHYHVLFDENNFSSDGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARYYIE 137

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BLAST of mRNA_H-elongata_contig142156.2917.1 vs. uniprot
Match: D5ACK3_PICSI (Piwi domain-containing protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=D5ACK3_PICSI)

HSP 1 Score: 192 bits (487), Expect = 2.860e-59
Identity = 87/141 (61.70%), Postives = 108/141 (76.60%), Query Frame = 0

Query:    1 LFEQVRAIEQACSSLQNGYRPTITFIVVQKRHHTRLFQPRKEDQ---DRSGNVFPGTVVETGICHPMEWDFYLMSHGGLQGTSRPAKYHVLWDENAFDSDSLQMLCYHLCFMYCRCTRSVSIPPAVYYAHLVAFRAQFFVN 138
            L  ++ AI +AC+SL+  Y+P +TF+VVQKRHHTRLF    +D+   DRSGN+ PGTVV++ ICHP E+DFYL SH G+QGTSRPA YHVLWDEN F +D LQ L  +LC+ Y RCTRSVSI P  YYAHL AFRA+F++ 
Sbjct:   36 LLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHQDRNATDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYME 176

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig142156.2917.1 vs. uniprot

BLAST of mRNA_H-elongata_contig142156.2917.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A2S1PRW8_FUCSE	2.040e-87	90.71	Putative argonaute n=1 Tax=Fucus serratus TaxID=87...	[more]
D7FQK3_ECTSI	3.510e-87	90.71	Argonaute 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7...	[more]
A0A2K3PG38_TRIPR	9.220e-62	63.64	Argonaute protein n=1 Tax=Trifolium pratense TaxID...	[more]
A0A4P9VYH5_9FUNG	1.560e-61	68.42	Piwi domain-containing protein (Fragment) n=2 Tax=...	[more]
A0A2H5QNJ6_CITUN	6.720e-60	61.70	Piwi domain-containing protein n=1 Tax=Citrus unsh...	[more]
A0A1J3GMK6_NOCCA	1.110e-59	61.27	Protein argonaute 5 (Fragment) n=2 Tax=Noccaea cae...	[more]
A0A446MKS1_TRITD	1.380e-59	62.41	Piwi domain-containing protein n=2 Tax=Triticum tu...	[more]
A0A446LC47_TRITD	1.990e-59	62.41	Piwi domain-containing protein n=5 Tax=Triticum tu...	[more]
A0A6M2EQP3_9ROSI	2.640e-59	62.04	Piwi domain-containing protein n=1 Tax=Populus dav...	[more]
D5ACK3_PICSI	2.860e-59	61.70	Piwi domain-containing protein n=1 Tax=Picea sitch...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003165	Piwi domain	SMART	SM00950	Piwi_a_2	coord: 1..138 e-value: 9.6E-8 score: 34.6
IPR003165	Piwi domain	PFAM	PF02171	Piwi	coord: 5..137 e-value: 2.1E-51 score: 174.9
IPR003165	Piwi domain	PROSITE	PS50822	PIWI	coord: 1..138 score: 26.026
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 1..143 e-value: 4.7E-66 score: 224.7
None	No IPR available	PANTHER	PTHR22891:SF136		coord: 4..138
None	No IPR available	PANTHER	PTHR22891	EUKARYOTIC TRANSLATION INITIATION FACTOR 2C	coord: 4..138
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 5..135

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig142156	contig	H-elongata_contig142156:41..1342 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig142156.2917.1	mRNA_H-elongata_contig142156.2917.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig142156 41..1342 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig142156.2917.1 ID=prot_H-elongata_contig142156.2917.1|Name=mRNA_H-elongata_contig142156.2917.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=145bp
LFEQVRAIEQACSSLQNGYRPTITFIVVQKRHHTRLFQPRKEDQDRSGNV
FPGTVVETGICHPMEWDFYLMSHGGLQGTSRPAKYHVLWDENAFDSDSLQ
MLCYHLCFMYCRCTRSVSIPPAVYYAHLVAFRAQFFVNVSIDTP*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003165	Piwi
IPR036397	RNaseH_sf
IPR012337	RNaseH-like_sf