prot_H-elongata_contig141986.2903.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig141986.2903.1
Unique Nameprot_H-elongata_contig141986.2903.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length124
Homology
[Close]
BLAST of mRNA_H-elongata_contig141986.2903.1 vs. uniprot
Match: D7FWI9_ECTSI (Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7FWI9_ECTSI)

HSP 1 Score: 216 bits (550), Expect = 1.010e-70
Identity = 114/123 (92.68%), Postives = 119/123 (96.75%), Query Frame = 0 
Query:    1 MTGKGKGGRGDKKSTTRSSKAGLQFPVGRIGRFLKAGKYSQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVVKK 123
            M+GKGKGGRG KKSTTRS+KAGLQFPVGR+GRFLK GKY+ RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK VKK
Sbjct:    1 MSGKGKGGRG-KKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVKK 122
[Close]
BLAST of mRNA_H-elongata_contig141986.2903.1 vs. uniprot
Match: D7G193_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G193_ECTSI)

HSP 1 Score: 214 bits (545), Expect = 3.460e-69
Identity = 113/122 (92.62%), Postives = 118/122 (96.72%), Query Frame = 0 
Query:    1 MTGKGKGGRGDKKSTTRSSKAGLQFPVGRIGRFLKAGKYSQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVVK 122
            M+GKGKGGRG KKSTTRS+KAGLQFPVGR+GRFLK GKY+ RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK VK
Sbjct:   46 MSGKGKGGRG-KKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVK 166
[Close]
BLAST of mRNA_H-elongata_contig141986.2903.1 vs. uniprot
Match: A0A6H5KG79_9PHAE (Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG79_9PHAE)

HSP 1 Score: 206 bits (524), Expect = 1.430e-66
Identity = 109/119 (91.60%), Postives = 115/119 (96.64%), Query Frame = 0 
Query:    1 MTGKGKGGRGDKKSTTRSSKAGLQFPVGRIGRFLKAGKYSQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 119
            M+GKGKGGRG KKST++SSKAGLQFPV RIGR+LK GKY+ RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK
Sbjct:    1 MSGKGKGGRG-KKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 118
[Close]
BLAST of mRNA_H-elongata_contig141986.2903.1 vs. uniprot
Match: D7FVQ5_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVQ5_ECTSI)

HSP 1 Score: 206 bits (524), Expect = 7.310e-66
Identity = 109/119 (91.60%), Postives = 115/119 (96.64%), Query Frame = 0 
Query:    1 MTGKGKGGRGDKKSTTRSSKAGLQFPVGRIGRFLKAGKYSQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 119
            M+GKGKGGRG KKST++SSKAGLQFPV RIGR+LK GKY+ RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK
Sbjct:   52 MSGKGKGGRG-KKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 169
[Close]
BLAST of mRNA_H-elongata_contig141986.2903.1 vs. uniprot
Match: D8LLP0_ECTSI (Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLP0_ECTSI)

HSP 1 Score: 202 bits (514), Expect = 2.840e-65
Identity = 106/119 (89.08%), Postives = 113/119 (94.96%), Query Frame = 0 
Query:    1 MTGKGKGGRGDKKSTTRSSKAGLQFPVGRIGRFLKAGKYSQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 119
            M+GKGKGGRG KK T+RS+KAGLQFPVGRIGRF+K GKYS RVG GAPVY+AAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELN+LLG+ TIASGGVLPNIHAVLLPKK
Sbjct:    1 MSGKGKGGRG-KKITSRSAKAGLQFPVGRIGRFIKQGKYSSRVGGGAPVYMAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNRLLGDATIASGGVLPNIHAVLLPKK 118
[Close]
BLAST of mRNA_H-elongata_contig141986.2903.1 vs. uniprot
Match: A0A448ZH28_9STRA (Histone H2A n=12 Tax=Bacillariophyta TaxID=2836 RepID=A0A448ZH28_9STRA)

HSP 1 Score: 201 bits (510), Expect = 1.270e-64
Identity = 102/119 (85.71%), Postives = 113/119 (94.96%), Query Frame = 0 
Query:    1 MTGKGKGGRGDKKSTTRSSKAGLQFPVGRIGRFLKAGKYSQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 119
            M+GKGKGGRG+KKSTT S+KAGLQFPVGRIGR+L+ GKY+ R+GAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIVPRHI LAV+NDEELNKLLG VTIASGGVLPNIHA+LLPKK
Sbjct:    1 MSGKGKGGRGEKKSTTASAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVKNDEELNKLLGGVTIASGGVLPNIHAILLPKK 119
[Close]
BLAST of mRNA_H-elongata_contig141986.2903.1 vs. uniprot
Match: A0A6U2JFS4_9STRA (Histone H2A n=6 Tax=Bacillariophyta TaxID=2836 RepID=A0A6U2JFS4_9STRA)

HSP 1 Score: 201 bits (510), Expect = 1.270e-64
Identity = 104/122 (85.25%), Postives = 113/122 (92.62%), Query Frame = 0 
Query:    1 MTGKGKGGRGDKKSTTRSSKAGLQFPVGRIGRFLKAGKYSQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVVK 122
            M+GKGKGGRG KKSTT S+KAGLQFPVGRIGR+L+ GKY+ R+GAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIVPRHI LAV+NDEELNKLLG VTIASGGVLPNIHAVLLPKK  K
Sbjct:    1 MSGKGKGGRGGKKSTTSSAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVKNDEELNKLLGGVTIASGGVLPNIHAVLLPKKSAK 122
[Close]
BLAST of mRNA_H-elongata_contig141986.2903.1 vs. uniprot
Match: A0A836CG77_9STRA (Histone H2A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG77_9STRA)

HSP 1 Score: 200 bits (508), Expect = 3.220e-64
Identity = 105/121 (86.78%), Postives = 113/121 (93.39%), Query Frame = 0 
Query:    1 MTGKGKGGRGD--KKSTTRSSKAGLQFPVGRIGRFLKAGKYSQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 119
            M GKGKGGRG   KKST++SSKAGLQFPV R+GRFLK G+Y++RVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIVPRHIQLAVRNDEELNKLLG VTIASGGVLPNIHAVLLPKK
Sbjct:    1 MAGKGKGGRGAEAKKSTSKSSKAGLQFPVARLGRFLKVGRYAERVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHIQLAVRNDEELNKLLGNVTIASGGVLPNIHAVLLPKK 121
[Close]
BLAST of mRNA_H-elongata_contig141986.2903.1 vs. uniprot
Match: A0A835ZLE9_9STRA (Histone H2A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLE9_9STRA)

HSP 1 Score: 200 bits (509), Expect = 3.250e-64
Identity = 100/121 (82.64%), Postives = 115/121 (95.04%), Query Frame = 0 
Query:    3 GKGKGGRGDKKSTTRSSKAGLQFPVGRIGRFLKAGKYSQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVVKK 123
            GKGKGGRGDKK+ ++S+KAGLQFPVGR+GRFLK G+Y++RVGAGAPVY+AAV+EYL AEVLEL+GNAARDNKK+RI+PRHIQLAVRNDEELNKLLG+VTIA+GGVLPNIHAVLLPKK   K
Sbjct:    5 GKGKGGRGDKKAVSKSAKAGLQFPVGRVGRFLKQGRYAKRVGAGAPVYMAAVMEYLCAEVLELSGNAARDNKKSRIIPRHIQLAVRNDEELNKLLGKVTIAAGGVLPNIHAVLLPKKTRSK 125
[Close]
BLAST of mRNA_H-elongata_contig141986.2903.1 vs. uniprot
Match: B7FWQ2_PHATC (Histone H2A n=9 Tax=Bacillariophyta TaxID=2836 RepID=B7FWQ2_PHATC)

HSP 1 Score: 198 bits (504), Expect = 1.190e-63
Identity = 101/117 (86.32%), Postives = 111/117 (94.87%), Query Frame = 0 
Query:    3 GKGKGGRGDKKSTTRSSKAGLQFPVGRIGRFLKAGKYSQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 119
            GKGKGGRGDKKSTT S+KAGLQFPVGRIGR+L+ GKY+ R+GAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIVPRHI LAV+NDEELNKLLG VTIA+GGVLPNIHA+LLPKK
Sbjct:    5 GKGKGGRGDKKSTTASAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVKNDEELNKLLGGVTIAAGGVLPNIHAILLPKK 121
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig141986.2903.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWI9_ECTSI1.010e-7092.68Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7... [more]
D7G193_ECTSI3.460e-6992.62Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A6H5KG79_9PHAE1.430e-6691.60Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7FVQ5_ECTSI7.310e-6691.60Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
D8LLP0_ECTSI2.840e-6589.08Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8... [more]
A0A448ZH28_9STRA1.270e-6485.71Histone H2A n=12 Tax=Bacillariophyta TaxID=2836 Re... [more]
A0A6U2JFS4_9STRA1.270e-6485.25Histone H2A n=6 Tax=Bacillariophyta TaxID=2836 Rep... [more]
A0A836CG77_9STRA3.220e-6486.78Histone H2A n=2 Tax=Tribonema minus TaxID=303371 R... [more]
A0A835ZLE9_9STRA3.250e-6482.64Histone H2A n=2 Tax=Tribonema minus TaxID=303371 R... [more]
B7FWQ2_PHATC1.190e-6386.32Histone H2A n=9 Tax=Bacillariophyta TaxID=2836 Rep... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002119Histone H2APRINTSPR00620HISTONEH2Acoord: 42..57
score: 90.36
coord: 57..70
score: 90.54
coord: 13..35
score: 69.9
coord: 99..117
score: 76.04
coord: 71..85
score: 74.98
IPR002119Histone H2ASMARTSM00414h2a4coord: 3..122
e-value: 4.4E-78
score: 275.4
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 8..88
e-value: 8.0E-16
score: 58.6
IPR032454Histone H2A, C-terminal domainPFAMPF16211Histone_H2A_Ccoord: 91..123
e-value: 1.7E-18
score: 66.1
IPR009072Histone-foldGENE3D1.10.20.10coord: 2..123
e-value: 2.7E-61
score: 206.9
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 3..122
NoneNo IPR availablePANTHERPTHR23430:SF233HISTONE H2A.6-RELATEDcoord: 2..121
NoneNo IPR availablePANTHERPTHR23430HISTONE H2Acoord: 2..121
IPR032458Histone H2A conserved sitePROSITEPS00046HISTONE_H2Acoord: 21..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig141986contigH-elongata_contig141986:1204..1575 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig141986.2903.1mRNA_H-elongata_contig141986.2903.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig141986 1204..1575 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig141986.2903.1 ID=prot_H-elongata_contig141986.2903.1|Name=mRNA_H-elongata_contig141986.2903.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=124bp
MTGKGKGGRGDKKSTTRSSKAGLQFPVGRIGRFLKAGKYSQRVGAGAPVY
LAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEV
TIASGGVLPNIHAVLLPKKVVKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002119Histone_H2A
IPR007125Histone_H2A/H2B/H3
IPR032454Histone_H2A_C
IPR009072Histone-fold
IPR032458Histone_H2A_CS