prot_H-elongata_contig141780.2890.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig141780.2890.1
Unique Nameprot_H-elongata_contig141780.2890.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length89
Homology
BLAST of mRNA_H-elongata_contig141780.2890.1 vs. uniprot
Match: A0A6H5KN62_9PHAE (Glycine cleavage system P protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN62_9PHAE)

HSP 1 Score: 160 bits (406), Expect = 1.980e-44
Identity = 81/89 (91.01%), Postives = 87/89 (97.75%), Query Frame = 0
Query:    1 GAVAAAPYGSAAILPISWMYIKMLGEPGLKKSTQLAILNANYMAAKLEGHYNVLYRGREGLSAHEFIVDLRPFKPTAGIVEEDVAKRLQ 89
            GAVAAAP+GSAAILPISWMYIKMLGEPGLKKSTQLAILNANYMAAKL+GHYN++YRGR+GLSAHEFI+DLRPFK T GIVEEDVAKRLQ
Sbjct:  439 GAVAAAPFGSAAILPISWMYIKMLGEPGLKKSTQLAILNANYMAAKLDGHYNIVYRGRDGLSAHEFILDLRPFKHT-GIVEEDVAKRLQ 526          
BLAST of mRNA_H-elongata_contig141780.2890.1 vs. uniprot
Match: D7FRW0_ECTSI (Glycine cleavage system P protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRW0_ECTSI)

HSP 1 Score: 159 bits (403), Expect = 1.510e-43
Identity = 81/89 (91.01%), Postives = 86/89 (96.63%), Query Frame = 0
Query:    1 GAVAAAPYGSAAILPISWMYIKMLGEPGLKKSTQLAILNANYMAAKLEGHYNVLYRGREGLSAHEFIVDLRPFKPTAGIVEEDVAKRLQ 89
            GA+AAAP+GSAAILPISWMYIKMLGEPGLKKSTQLAILNANYMAAKL GHYNV+YRGR+GLSAHEFI+DLRPFK T GIVEEDVAKRLQ
Sbjct:  785 GAIAAAPFGSAAILPISWMYIKMLGEPGLKKSTQLAILNANYMAAKLAGHYNVVYRGRDGLSAHEFILDLRPFKHT-GIVEEDVAKRLQ 872          
BLAST of mRNA_H-elongata_contig141780.2890.1 vs. uniprot
Match: A0A835ZE30_9STRA (Glycine cleavage system P protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE30_9STRA)

HSP 1 Score: 149 bits (377), Expect = 4.900e-40
Identity = 75/89 (84.27%), Postives = 84/89 (94.38%), Query Frame = 0
Query:    1 GAVAAAPYGSAAILPISWMYIKMLGEPGLKKSTQLAILNANYMAAKLEGHYNVLYRGREGLSAHEFIVDLRPFKPTAGIVEEDVAKRLQ 89
            GAV+AAP+GSAAILPISWMYIKMLGEPGL+K+T+ AILNANYMAA+LEG Y++LYRGR GLSAHEFIVDLRPFK  AG+VEEDVAKRLQ
Sbjct:  783 GAVSAAPFGSAAILPISWMYIKMLGEPGLRKATEYAILNANYMAARLEGAYDILYRGRSGLSAHEFIVDLRPFKE-AGVVEEDVAKRLQ 870          
BLAST of mRNA_H-elongata_contig141780.2890.1 vs. uniprot
Match: A0A835ZCN8_9STRA (Glycine cleavage system P protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCN8_9STRA)

HSP 1 Score: 147 bits (371), Expect = 3.170e-39
Identity = 74/89 (83.15%), Postives = 83/89 (93.26%), Query Frame = 0
Query:    1 GAVAAAPYGSAAILPISWMYIKMLGEPGLKKSTQLAILNANYMAAKLEGHYNVLYRGREGLSAHEFIVDLRPFKPTAGIVEEDVAKRLQ 89
            GAV+AAP+GSAAILPISWMYIKMLGEPGL+K+T+ AILNANYMAA+L+G +N+LYRGR GLSAHEFIVDLRPFK   GIVEEDVAKRLQ
Sbjct:  794 GAVSAAPFGSAAILPISWMYIKMLGEPGLRKATEYAILNANYMAARLDGKFNILYRGRSGLSAHEFIVDLRPFKDF-GIVEEDVAKRLQ 881          
BLAST of mRNA_H-elongata_contig141780.2890.1 vs. uniprot
Match: A0A7R9WUH1_9STRA (Glycine dehydrogenase (aminomethyl-transferring) n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WUH1_9STRA)

HSP 1 Score: 131 bits (329), Expect = 2.110e-35
Identity = 66/89 (74.16%), Postives = 74/89 (83.15%), Query Frame = 0
Query:    1 GAVAAAPYGSAAILPISWMYIKMLGEPGLKKSTQLAILNANYMAAKLEGHYNVLYRGREGLSAHEFIVDLRPFKPTAGIVEEDVAKRLQ 89
            GAVA AP+GSAAILPISWMYIKMLGEPGLK +T  AILNANYMAA+L G Y+VL+ G  G  AHEFI+DLRP K + G+ EEDVAKRLQ
Sbjct:  100 GAVAGAPFGSAAILPISWMYIKMLGEPGLKWATGQAILNANYMAARLNGAYDVLFVGTNGQCAHEFILDLRPLKASTGVTEEDVAKRLQ 188          
BLAST of mRNA_H-elongata_contig141780.2890.1 vs. uniprot
Match: A0A7S2C4K9_9STRA (Glycine cleavage system P protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C4K9_9STRA)

HSP 1 Score: 135 bits (339), Expect = 6.580e-35
Identity = 67/89 (75.28%), Postives = 79/89 (88.76%), Query Frame = 0
Query:    1 GAVAAAPYGSAAILPISWMYIKMLGEPGLKKSTQLAILNANYMAAKLEGHYNVLYRGREGLSAHEFIVDLRPFKPTAGIVEEDVAKRLQ 89
            GA+AAAP+GSAAILPISWMYIKMLGE GL KSTQ+AILNANYM+ +LE H+ +L+RG+ G+ AHEFI+DLRPFK   GIVEED+AKRLQ
Sbjct:  780 GAIAAAPFGSAAILPISWMYIKMLGEAGLTKSTQVAILNANYMSKRLEEHFPILFRGKTGMCAHEFIMDLRPFKEH-GIVEEDIAKRLQ 867          
BLAST of mRNA_H-elongata_contig141780.2890.1 vs. uniprot
Match: A0A3B4VQV0_SERDU (Glycine dehydrogenase (decarboxylating), mitochondrial-like n=4 Tax=Seriola TaxID=8160 RepID=A0A3B4VQV0_SERDU)

HSP 1 Score: 128 bits (321), Expect = 1.300e-34
Identity = 62/89 (69.66%), Postives = 74/89 (83.15%), Query Frame = 0
Query:    1 GAVAAAPYGSAAILPISWMYIKMLGEPGLKKSTQLAILNANYMAAKLEGHYNVLYRGREGLSAHEFIVDLRPFKPTAGIVEEDVAKRLQ 89
            G ++AAP+GS+AILPISW YIKM+G  GL  +T++AILNANYMA +LEGHY VLYRGR+G  AHEFI+D+RPFK TA I   DVAKRLQ
Sbjct:   56 GTISAAPWGSSAILPISWAYIKMMGAKGLLHATEVAILNANYMAKRLEGHYKVLYRGRKGFVAHEFILDVRPFKKTANIEAVDVAKRLQ 144          
BLAST of mRNA_H-elongata_contig141780.2890.1 vs. uniprot
Match: A0A7S3HWW2_9SPIT (Glycine dehydrogenase (aminomethyl-transferring) n=1 Tax=Favella ehrenbergii TaxID=182087 RepID=A0A7S3HWW2_9SPIT)

HSP 1 Score: 128 bits (322), Expect = 3.410e-34
Identity = 63/88 (71.59%), Postives = 74/88 (84.09%), Query Frame = 0
Query:    1 GAVAAAPYGSAAILPISWMYIKMLGEPGLKKSTQLAILNANYMAAKLEGHYNVLYRGREGLSAHEFIVDLRPFKPTAGIVEEDVAKRL 88
            G VAAAP+GSA+ILPISWMY  M+G  GLKK+TQ+AILNANYMAA+L GHY VL+ G+ G+ AHEFI+DLR FK +AGI E DVAKRL
Sbjct:  118 GPVAAAPWGSASILPISWMYCAMMGAAGLKKATQVAILNANYMAARLSGHYKVLFTGKTGMCAHEFILDLREFKASAGISEADVAKRL 205          
BLAST of mRNA_H-elongata_contig141780.2890.1 vs. uniprot
Match: A0A7S2NSV3_9STRA (Glycine cleavage system P protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NSV3_9STRA)

HSP 1 Score: 132 bits (333), Expect = 4.210e-34
Identity = 66/89 (74.16%), Postives = 75/89 (84.27%), Query Frame = 0
Query:    1 GAVAAAPYGSAAILPISWMYIKMLGEPGLKKSTQLAILNANYMAAKLEGHYNVLYRGREGLSAHEFIVDLRPFKPTAGIVEEDVAKRLQ 89
            GAV+AAP+GSAAILPISWMYIKM G  GLKK+T+ AILNANYMAA+L+G Y+VL+RG  G  AHEFI+DLRP K   GI EEDVAKRLQ
Sbjct:  665 GAVSAAPFGSAAILPISWMYIKMNGHEGLKKATEHAILNANYMAARLDGAYDVLFRGTNGQCAHEFIIDLRPLKAATGITEEDVAKRLQ 753          
BLAST of mRNA_H-elongata_contig141780.2890.1 vs. uniprot
Match: A0A7S1ESX9_9RHOD (Glycine cleavage system P protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ESX9_9RHOD)

HSP 1 Score: 131 bits (329), Expect = 4.320e-34
Identity = 64/89 (71.91%), Postives = 74/89 (83.15%), Query Frame = 0
Query:    1 GAVAAAPYGSAAILPISWMYIKMLGEPGLKKSTQLAILNANYMAAKLEGHYNVLYRGREGLSAHEFIVDLRPFKPTAGIVEEDVAKRLQ 89
            GAV+AAPYGSA+ILPISWMYIKM+G  GLK +T+ AILNANYMA +LE  Y VLYRG+ G SAHEFI+D+RP K  +GI E DVAKRLQ
Sbjct:  294 GAVSAAPYGSASILPISWMYIKMMGSDGLKNATEYAILNANYMAKRLENAYPVLYRGKNGRSAHEFIIDIRPMKAASGISESDVAKRLQ 382          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig141780.2890.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KN62_9PHAE1.980e-4491.01Glycine cleavage system P protein n=1 Tax=Ectocarp... [more]
D7FRW0_ECTSI1.510e-4391.01Glycine cleavage system P protein n=1 Tax=Ectocarp... [more]
A0A835ZE30_9STRA4.900e-4084.27Glycine cleavage system P protein n=1 Tax=Tribonem... [more]
A0A835ZCN8_9STRA3.170e-3983.15Glycine cleavage system P protein n=1 Tax=Tribonem... [more]
A0A7R9WUH1_9STRA2.110e-3574.16Glycine dehydrogenase (aminomethyl-transferring) n... [more]
A0A7S2C4K9_9STRA6.580e-3575.28Glycine cleavage system P protein n=1 Tax=Dictyoch... [more]
A0A3B4VQV0_SERDU1.300e-3469.66Glycine dehydrogenase (decarboxylating), mitochond... [more]
A0A7S3HWW2_9SPIT3.410e-3471.59Glycine dehydrogenase (aminomethyl-transferring) n... [more]
A0A7S2NSV3_9STRA4.210e-3474.16Glycine cleavage system P protein n=2 Tax=Leptocyl... [more]
A0A7S1ESX9_9RHOD4.320e-3471.91Glycine cleavage system P protein n=1 Tax=Timspurc... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015422Pyridoxal phosphate-dependent transferase domain 1GENE3D3.90.1150.10coord: 18..89
e-value: 9.3E-13
score: 50.0
NoneNo IPR availablePANTHERPTHR11773:SF1GLYCINE DEHYDROGENASE (DECARBOXYLATING), MITOCHONDRIALcoord: 1..89
IPR020581Glycine cleavage system P proteinPANTHERPTHR11773GLYCINE DEHYDROGENASE, DECARBOXYLATINGcoord: 1..89
IPR015424Pyridoxal phosphate-dependent transferaseSUPERFAMILY53383PLP-dependent transferasescoord: 6..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig141780contigH-elongata_contig141780:853..1605 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig141780.2890.1mRNA_H-elongata_contig141780.2890.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig141780 853..1605 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig141780.2890.1 ID=prot_H-elongata_contig141780.2890.1|Name=mRNA_H-elongata_contig141780.2890.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=89bp
GAVAAAPYGSAAILPISWMYIKMLGEPGLKKSTQLAILNANYMAAKLEGH
YNVLYRGREGLSAHEFIVDLRPFKPTAGIVEEDVAKRLQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015422PyrdxlP-dep_Trfase_dom1
IPR020581GDC_P
IPR015424PyrdxlP-dep_Trfase