prot_H-elongata_contig141325.2867.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig141325.2867.1
Unique Nameprot_H-elongata_contig141325.2867.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length56
Homology
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BLAST of mRNA_H-elongata_contig141325.2867.1 vs. uniprot
Match: D7FZ77_ECTSI (Inosine triphosphate pyrophosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZ77_ECTSI)

HSP 1 Score: 87.8 bits (216), Expect = 6.740e-19
Identity = 36/52 (69.23%), Postives = 46/52 (88.46%), Query Frame = 0 
Query:    4 VAIRLLKWVEGPLMATSEVSPQLMERVGAYLGRLHVELETFYDKSLLRNHVW 55
            +++RLLKWVEGP+M +SEV+P+LME+ GAYLGR+ VEL+ FYDKSLLR H W
Sbjct:  143 LSVRLLKWVEGPMMKSSEVTPELMEKTGAYLGRMQVELDNFYDKSLLRGHTW 194
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig141325.2867.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FZ77_ECTSI6.740e-1969.23Inosine triphosphate pyrophosphatase n=2 Tax=Ectoc... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig141325contigH-elongata_contig141325:1273..1440 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig141325.2867.1mRNA_H-elongata_contig141325.2867.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig141325 1273..1440 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig141325.2867.1 ID=prot_H-elongata_contig141325.2867.1|Name=mRNA_H-elongata_contig141325.2867.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=56bp
VYRVAIRLLKWVEGPLMATSEVSPQLMERVGAYLGRLHVELETFYDKSLL
RNHVW*
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