prot_H-elongata_contig141322.2866.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig141322.2866.1
Unique Nameprot_H-elongata_contig141322.2866.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length99
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig141322.2866.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 2..35
e-value: 0.0017
score: 27.6
coord: 44..77
e-value: 0.021
score: 24.0
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 44..77
score: 8.673
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 2..35
score: 7.464
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..98
e-value: 1.8E-24
score: 88.3
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 4..95
NoneNo IPR availablePFAMPF13424TPR_12coord: 5..75
e-value: 1.1E-16
score: 60.8
NoneNo IPR availablePANTHERPTHR45641:SF3NEPHROCYSTIN-3coord: 7..96
NoneNo IPR availablePANTHERPTHR45641FAMILY NOT NAMEDcoord: 7..96
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 2..77
score: 12.191

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig141322contigH-elongata_contig141322:48..1641 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig141322.2866.1mRNA_H-elongata_contig141322.2866.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig141322 31..1641 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig141322.2866.1 ID=prot_H-elongata_contig141322.2866.1|Name=mRNA_H-elongata_contig141322.2866.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=99bp
MAIDLTNLAALLKSQGDYDASEKYYKRALIIFEKQLDRHHPRIARLLCDL
AGLLHDKGEHDEAKERYRQAISIREHDPDRLDMAIELTNLAALLKSQVT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom