prot_H-elongata_contig14088.2830.1 (polypeptide) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig14088.2830.1 vs. uniprot
Match: A0A6H5L308_9PHAE (Tr-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L308_9PHAE) HSP 1 Score: 318 bits (814), Expect = 1.810e-99 Identity = 156/173 (90.17%), Postives = 159/173 (91.91%), Query Frame = 0
Query: 2 ACAGIVLVVDAVEGVMMHTETLVKHALLEGLAITLCINKASSGDIGVDRLLLELKLPPADAYFKLVHTLEEVNGLIVANSTEVTGPPQRLDPAKGNVCFASAQHGWAFTTASFAKIYCDLYGGMSSKELGKRLWGDAWVDPTTRTFRKGFPPPDCQRTFVQFILEPMYKIYSQ 174
AC GIVLVVDAVEGVMMHTETLVKHAL EGLAITLCINK VDRLLLELKLPPADAYFKLVHTLEEVN LI ANSTEVTGPPQRLDPAKGNVCFASAQHGWAFTTASFAK+YCD+YG MS KELGKRLWGDAWVDPTTR FRKG+PPPDCQRTFVQFILEPMYKIYSQ
Sbjct: 242 ACDGIVLVVDAVEGVMMHTETLVKHALHEGLAITLCINK-------VDRLLLELKLPPADAYFKLVHTLEEVNALIAANSTEVTGPPQRLDPAKGNVCFASAQHGWAFTTASFAKVYCDVYGEMSPKELGKRLWGDAWVDPTTRAFRKGYPPPDCQRTFVQFILEPMYKIYSQ 407
BLAST of mRNA_H-elongata_contig14088.2830.1 vs. uniprot
Match: A0A7S2WSH7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WSH7_9STRA) HSP 1 Score: 249 bits (635), Expect = 1.290e-73 Identity = 133/211 (63.03%), Postives = 154/211 (72.99%), Query Frame = 0
Query: 1 RACAGIVLVVDAVEGVMMHTETLVKHALLEGLAITLCINKASSGDIGVDRLLLELKLPPADAYFKLVHTLEEVNGLIVANSTEVTGPPQRLDPAKGNVCFASAQHGWAFTTASFAKIYCDLY--GGMSSKELGKRLWGDAWVDPTTRTFRKGFPPPDCQRTFVQFILEPMYKIYSQVLGEEADTLRQTLAELGVRIGRDQARPPSPGMFLD 209
RA G+VL+VDAVEGVMM TE ++K ALLE L + L INK VDRL++ELKLPPADAY+KLVHT+EEVN LI + T VTG P RL PA GNVCFASAQHGW F+ SFAKIY + + G+S+KEL RLWGDAW+DP TRTF+K P D RTFVQ+ILEPMYKIYSQ LGEE +TLR TL ELGV + + P M LD
Sbjct: 197 RAADGVVLMVDAVEGVMMVTEKVIKAALLERLPLCLVINK-------VDRLIIELKLPPADAYYKLVHTIEEVNSLIAQHWTGVTGRPPRLSPALGNVCFASAQHGWCFSLLSFAKIYTNWHTDAGVSAKELSVRLWGDAWLDPETRTFKKRSPGMDVPRTFVQYILEPMYKIYSQALGEEPETLRVTLRELGVTLSK-------PEMHLD 393
BLAST of mRNA_H-elongata_contig14088.2830.1 vs. uniprot
Match: A0A835Z8L8_9STRA (GTPase of the U5 snRNP particle n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8L8_9STRA) HSP 1 Score: 240 bits (613), Expect = 2.060e-70 Identity = 124/200 (62.00%), Postives = 146/200 (73.00%), Query Frame = 0
Query: 2 ACAGIVLVVDAVEGVMMHTETLVKHALLEGLAITLCINKASSGDIGVDRLLLELKLPPADAYFKLVHTLEEVNGLIVANSTEVTGPPQRLDPAKGNVCFASAQHGWAFTTASFAKIYCDLYGG--MSSKELGKRLWGDAWVDPTTRTFRKGFPPP-----DCQRTFVQFILEPMYKIYSQVLGEEADTLRQTLAELGVRI 194
AC G+VLVVDAVEGVMM TE L + AL GL++ L INK VDRL+LELKLPP DAYFKL HTLEEVN L+ V G P RLDPA+GNVCFASA HGW F+ SFA YC+ + G + +++L KRLWGD W+DP TR FRK PPP + +R+FVQFILEP+YKIYSQVLGEE D L+ TL+ELGVR+
Sbjct: 211 ACDGVVLVVDAVEGVMMQTERLARIALAGGLSVCLVINK-------VDRLILELKLPPRDAYFKLQHTLEEVNALLARCWAGVAGAPPRLDPARGNVCFASALHGWCFSVGSFAAAYCNYHAGSGVDARDLTKRLWGDVWMDPWTRQFRKAQPPPGPAGEEAERSFVQFILEPLYKIYSQVLGEEPDELQATLSELGVRL 403
BLAST of mRNA_H-elongata_contig14088.2830.1 vs. uniprot
Match: A0A7S2V7Q4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V7Q4_9STRA) HSP 1 Score: 223 bits (567), Expect = 1.200e-65 Identity = 113/217 (52.07%), Postives = 143/217 (65.90%), Query Frame = 0
Query: 1 RACAGIVLVVDAVEGVMMHTETLVKHALLEGLAITLCINKASSGDIGVDRLLLELKLPPADAYFKLVHTLEEVNGLIVANSTEVTGPPQRLDPAKGNVCFASAQHGWAFTTASFAKIYCDLYG-------------------GMSSKELGKRLWGDAWVDPTTRTFRKGFPPPDCQRTFVQFILEPMYKIYSQVLGEEADTLRQTLAELGVRIGRDQ 198
RA G+V+VVD EGVM+ TE + HA+ +GL I L +NK VDRL+LELKLPPADAYFKL+HTLEEVNGL+ ++ PP RL P GNVCFAS HGW F+ SFA +YC YG G+ S+EL +RLWGD ++DP TRTF+K QRTF+QF+LEP+YKIYSQVLGE+A L +TL E+GV + +++
Sbjct: 232 RAADGVVVVVDCAEGVMLGTERAISHAVSQGLPILLVLNK-------VDRLILELKLPPADAYFKLLHTLEEVNGLVQGQASAAGVPPPRLSPELGNVCFASGHHGWVFSLTSFADLYCRYYGRRGAYNAMRNASGSVDIADGVDSRELARRLWGDVYLDPITRTFKKQPTVEGVQRTFIQFVLEPLYKIYSQVLGEDAAALSRTLHEVGVHLRKEE 441
BLAST of mRNA_H-elongata_contig14088.2830.1 vs. uniprot
Match: A0A067CTK3_SAPPC (Tr-type G domain-containing protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CTK3_SAPPC) HSP 1 Score: 216 bits (550), Expect = 1.650e-61 Identity = 109/193 (56.48%), Postives = 143/193 (74.09%), Query Frame = 0
Query: 5 GIVLVVDAVEGVMMHTETLVKHALLEGLAITLCINKASSGDIGVDRLLLELKLPPADAYFKLVHTLEEVNGLIVANSTEVTGPPQRLDPAKGNVCFASAQHGWAFTTASFAKIYCDLYGGMSSKELGKRLWGDAWVDPTTRTFRKGFPPPDCQRTFVQFILEPMYKIYSQVLGEEADTLRQTLAELGVRIGRD 197
G VLVVDA+EGVMM+TE +VK ALL L I L +NK VDRL++ELKLPPADAYFKL+HT+EEVN +I + T + P +R+ P GNVCFASAQHGW F+ SF+++Y +++ G++ EL KRLWGD + P TRTF+K P + R+FV FILEP+YKIY+QVLGE+ TL +TL +LG+R+ R+
Sbjct: 248 GAVLVVDAIEGVMMNTERIVKAALLSKLPILLVVNK-------VDRLIIELKLPPADAYFKLLHTIEEVNKIIETH-TPLGQPAKRVSPELGNVCFASAQHGWHFSLESFSRLYSEIHRGVNPTELAKRLWGDMYYAPATRTFKKKVPYENAPRSFVSFILEPIYKIYAQVLGEDTATLSKTLRDLGLRVRRE 432
BLAST of mRNA_H-elongata_contig14088.2830.1 vs. uniprot
Match: A0A1V4J3G1_PATFA (Tr-type G domain-containing protein n=1 Tax=Patagioenas fasciata monilis TaxID=372326 RepID=A0A1V4J3G1_PATFA) HSP 1 Score: 202 bits (514), Expect = 8.920e-61 Identity = 103/200 (51.50%), Postives = 138/200 (69.00%), Query Frame = 0
Query: 1 RACAGIVLVVDAVEGVMMHTETLVKHALLEGLAITLCINKASSGDIGVDRLLLELKLPPADAYFKLVHTLEEVNGLIVANSTEVTGPPQRLDPAKGNVCFASAQHGWAFTTASFAKIYCDLYGGMSSKELGKRLWGDAWVDPTTRTFRKGFPPPDCQRTFVQFILEPMYKIYSQVLGEEADTLRQTLAELGVRIGRDQAR 200
R G+VL +DA EGVM++TE L+KHA+ E LA+T+CINK +DRL+LELKLPP DAY+KL H ++EVNGLI ST+ L P GNVCF+S+Q+ FT SFAKIY D YG ++ +E KRLWGD + +P TR F K P QR+FV+FILEP+YKI +QV+G+ TL +TL ELG+ + +++ +
Sbjct: 111 RISDGVVLFIDAAEGVMLNTERLIKHAVQERLAVTVCINK-------IDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDEN---LVLSPLLGNVCFSSSQYSICFTLGSFAKIYADTYGDINYQEFAKRLWGDIYFNPKTRKFTKKAPTSSSQRSFVEFILEPLYKILAQVVGDVDTTLPRTLDELGIHLTKEELK 300
BLAST of mRNA_H-elongata_contig14088.2830.1 vs. uniprot
Match: W7TM02_9STRA (116 kDa U5 small nuclear ribonucleoprotein component n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TM02_9STRA) HSP 1 Score: 213 bits (541), Expect = 2.830e-60 Identity = 116/216 (53.70%), Postives = 144/216 (66.67%), Query Frame = 0
Query: 1 RACAGIVLVVDAVEGVMMHTETLVKHALLEGLAITLCINKASSGDIGVDRLLLELKLPPADAYFKLVHTLEEVNGLIVANSTE-VTGPPQRLDPAKGNVCFASAQHGWAFTTASFAKIYCDLY---GGMSSKELGKRLWGDAWVDPTTRTFRKGFPPPDCQRTFVQFILEPMYKIYSQVLGEEADTLRQTLAELGVRIGRDQAR-PPSPGMFLDCS 211
RAC G +LVVDAVEGVMM TE L+K AL E LA+ L INK VDRL+LELKLPPADAY+KL HT+EEVN I ++ + PQRL PA GNV FASA HGW F+ SFA +Y + + E KRLWG+A++D +RTFRK P P+ R+FVQFIL+P+YKIYS LGE+A L + + ELGVR+ R++ P P + L S
Sbjct: 231 RACDGALLVVDAVEGVMMQTERLIKQALREQLALVLVINK-------VDRLILELKLPPADAYYKLKHTIEEVNACIERHTPNALVRRPQRLSPALGNVAFASAVHGWCFSLGSFASLYASYHKLGDQFETTEFAKRLWGNAYLDEASRTFRKQPPHPEADRSFVQFILDPLYKIYSHTLGEDAAELTEVIRELGVRVRREELHLDPKPLLKLVLS 439
BLAST of mRNA_H-elongata_contig14088.2830.1 vs. uniprot
Match: A0A5D6YFB3_9STRA (Tr-type G domain-containing protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YFB3_9STRA) HSP 1 Score: 210 bits (535), Expect = 2.240e-59 Identity = 105/194 (54.12%), Postives = 141/194 (72.68%), Query Frame = 0
Query: 5 GIVLVVDAVEGVMMHTETLVKHALLEGLAITLCINKASSGDIGVDRLLLELKLPPADAYFKLVHTLEEVNGLIVANSTEVTGPPQRLDPAKGNVCFASAQHGWAFTTASFAKIYCDLYGGMSSKELGKRLWGDAWVDPTTRTFRKGFPPPDCQRTFVQFILEPMYKIYSQVLGEEADTLRQTLAELGVRIGRDQ 198
G VLVVDA+EGVMM+TE L+K AL +A+ L +NK VDRL++ELKLPP DAYFKL+HT+EEVN +I A+ T V QRL P +GNVCFAS QHGW+FT SFA++Y + + G+S+ +L RLWGD + P TRTF+K P + R+FV FILEP+YKIY++VL E+A L Q+L +G+R+ +++
Sbjct: 244 GAVLVVDAIEGVMMNTERLIKAALKARVALVLVVNK-------VDRLIVELKLPPVDAYFKLLHTIEEVNAVIAAH-TPVGHTQQRLSPERGNVCFASGQHGWSFTLESFAQLYAETHPGVSAADLAPRLWGDKYYSPQTRTFKKTIPYENAPRSFVLFILEPLYKIYAKVLSEDAPQLAQSLRAMGLRLRKEE 429
BLAST of mRNA_H-elongata_contig14088.2830.1 vs. uniprot
Match: A0A1X7VQM3_AMPQE (116 kDa U5 small nuclear ribonucleoprotein component n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7VQM3_AMPQE) HSP 1 Score: 210 bits (534), Expect = 2.440e-59 Identity = 106/201 (52.74%), Postives = 140/201 (69.65%), Query Frame = 0
Query: 1 RACAGIVLVVDAVEGVMMHTETLVKHALLEGLAITLCINKASSGDIGVDRLLLELKLPPADAYFKLVHTLEEVNGLIVANSTEVTGPPQRLDPAKGNVCFASAQHGWAFTTASFAKIYCDLYGG-MSSKELGKRLWGDAWVDPTTRTFRKGFPPPDCQRTFVQFILEPMYKIYSQVLGEEADTLRQTLAELGVRIGRDQAR 200
R C G+++VVD EGVMM+TE L+KHAL E LAIT+C+NK +DRL+LELKLPP DAY+KL HTL+E+N L+ S G + P GNVCF+S+Q+G++FT SFA++Y DLYGG S KE KRLWGD + + T RTF K P D QRTF++FILEP+YKI++Q +G+ TL L ELGV + + + +
Sbjct: 230 RLCDGVMIVVDVSEGVMMNTERLIKHALQEKLAITICMNK-------IDRLILELKLPPQDAYYKLKHTLDEINSLLSLYSESTEGVV--VSPLLGNVCFSSSQYGFSFTLESFAQLYSDLYGGGFSPKEFAKRLWGDIYFNKTKRTFTKKIPSTDSQRTFIEFILEPLYKIFAQTVGDVDTTLPSVLKELGVFLSKSELK 421
BLAST of mRNA_H-elongata_contig14088.2830.1 vs. uniprot
Match: A0A2P4XYL9_9STRA (U5 small nuclear ribonucleoprotein component n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XYL9_9STRA) HSP 1 Score: 206 bits (524), Expect = 2.630e-59 Identity = 105/194 (54.12%), Postives = 134/194 (69.07%), Query Frame = 0
Query: 5 GIVLVVDAVEGVMMHTETLVKHALLEGLAITLCINKASSGDIGVDRLLLELKLPPADAYFKLVHTLEEVNGLIVANSTEVTGPPQRLDPAKGNVCFASAQHGWAFTTASFAKIYCDLYGGMSSKELGKRLWGDAWVDPTTRTFRKGFPPPDCQRTFVQFILEPMYKIYSQVLGEEADTLRQTLAELGVRIGRDQ 198
G VLVVDAVEGVMM+TE LVK AL +AI L +NK VDRL++ELKLPPADAYFKL+HT+EE+N +I AN T QRL P GNVCFAS QHGW+FT SFA+IY + Y G+ L R WGD + +P TRTF K P P R+F+QF+LEP+YK+YS+VL + L +L +G+R+ +++
Sbjct: 201 GAVLVVDAVEGVMMNTERLVKAALRANVAIVLVVNK-------VDRLIIELKLPPADAYFKLLHTIEEINAIIEAN-TPANQEKQRLSPELGNVCFASGQHGWSFTLESFAQIYAETYPGVPPSALAARFWGDKYFNPQTRTFTKKSPYPGALRSFIQFVLEPLYKMYSKVLNGDPKELSVSLRAMGLRLKKEE 386 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14088.2830.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig14088.2830.1 ID=prot_H-elongata_contig14088.2830.1|Name=mRNA_H-elongata_contig14088.2830.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=212bpback to top |