prot_H-elongata_contig14044.2806.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig14044.2806.1
Unique Nameprot_H-elongata_contig14044.2806.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length214
Homology
BLAST of mRNA_H-elongata_contig14044.2806.1 vs. uniprot
Match: A0A6H5LCC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCC1_9PHAE)

HSP 1 Score: 252 bits (644), Expect = 2.980e-80
Identity = 146/218 (66.97%), Postives = 176/218 (80.73%), Query Frame = 0
Query:    1 MSEIKSAASAYQLFQREKHGDVKATLEAKGQRADFGDVQRELSSRWKELTPQNADRARFEGLAAEDRARFQRESAQKDREVDEAQAAKRAARETLMVDSRMRGRPKAPEQQVRPKSMAPPRVISEEERAFRQERQEAKQKEKAERDARLKVAQSQHDSIKNEIAKQASARLQYLLKQSDIFKHFGAGKESAQAEEARKREASV-----AKEVSSPGKR 213
            MSEIK+A SAY L+ +EKH +VKA+LEAKGQ ADFGDV RELSSRWKEL   +ADR +FE LAAEDRARF+RESA KD EV EAQ AKRA RE+L  +SRMRGRPK+ E + + K+M PPR +SEEE+A RQERQ+ K KEKAER+AR ++A++QH SIK+EIAKQASARLQ+LLKQSDIF+HFG GK++ QA EA+K +        A EV+SPGKR
Sbjct:    1 MSEIKAATSAYHLYMKEKHAEVKASLEAKGQTADFGDVMRELSSRWKELGSDDADRVKFESLAAEDRARFERESAAKDLEVAEAQRAKRAERESLTTESRMRGRPKSEEPKPKAKAMGPPRQLSEEEKARRQERQDLKNKEKAERNARTQIAEAQHTSIKDEIAKQASARLQFLLKQSDIFQHFGVGKQATQAGEAKKEKGGASAEAKAGEVTSPGKR 218          
BLAST of mRNA_H-elongata_contig14044.2806.1 vs. uniprot
Match: D7FV68_ECTSI (Probable chromatin remodelling complex ATPase chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV68_ECTSI)

HSP 1 Score: 252 bits (644), Expect = 7.990e-74
Identity = 146/219 (66.67%), Postives = 179/219 (81.74%), Query Frame = 0
Query:    1 MSEIKSAASAYQLFQREKHGDVKATLEAKGQRADFGDVQRELSSRWKELTPQNADRARFEGLAAEDRARFQRESAQKDREVDEAQAAKRAARETLMVDSRMRGRPKAPEQQVRPKSMAPPRVISEEERAFRQERQEAKQKEKAERDARLKVAQSQHDSIKNEIAKQASARLQYLLKQSDIFKHFGAGKESAQAEEARKREASV-----AKEVSSPGKRR 214
            MSEIK+AASAY L+ +EKH +VKA+LEAKGQ ADFGDV RELSSRWKEL   +ADR +FE LAAEDRARF+RESA KD EV EAQ AKRA RE+L  +SRMRGRPK+ + + + K+M PPR +SEEE+A RQERQ+ K KEKAER+AR ++A++QH SIK+EIAKQASARLQ+LLKQSDIF+HFG GK++ QA EA++ + +      A EV+SPGKRR
Sbjct:    1 MSEIKAAASAYHLYMKEKHAEVKASLEAKGQTADFGDVMRELSSRWKELGSDDADRVKFETLAAEDRARFERESAAKDLEVAEAQRAKRAERESLTTESRMRGRPKSEQPKPKAKAMGPPRQLSEEEKARRQERQDLKNKEKAERNARTQIAEAQHTSIKDEIAKQASARLQFLLKQSDIFQHFGVGKQATQAGEAKQEKGAASAEAKAGEVTSPGKRR 219          
BLAST of mRNA_H-elongata_contig14044.2806.1 vs. uniprot
Match: A0A7S1XV30_9STRA (Hypothetical protein (Fragment) n=4 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XV30_9STRA)

HSP 1 Score: 105 bits (262), Expect = 1.410e-22
Identity = 81/183 (44.26%), Postives = 110/183 (60.11%), Query Frame = 0
Query:    7 AASAYQLFQREKHGDVKATLEAKGQRADFGDVQRELSSRWKELTPQNADRARFEGLAAEDRARFQRESAQKDREVDEAQAAKRAARETLMVDSRMRGRPKAPEQQVRPKSMAP--PRVISEEERAFRQERQEAKQKEKAERDARLKVAQSQHDSIKNEIAKQASARLQYLLKQSDIFKHFGAG 187
            A SAY +FQ E+HG +K + E  G     GDV + ++ RW+ELTP+  ++++FE LAAED+AR++ ESA  D   +EAQA +RA  E  +   R R +    E     K  AP  PRV+S E  A R E++ A++  +AE D         H+  K  IA+QA  RLQYLLKQSDIF+HFG G
Sbjct:   12 ARSAYAIFQAEEHGRLKESGEGLGG-GGLGDVAKAIAKRWQELTPE--EKSKFEKLAAEDKARYEAESAAADAAAEEAQAKRRADLEADVTGPRKRTQLVPAEA----KRAAPRKPRVVSAEVTAKRAEQRAAREAREAEID-------KAHEENKAFIARQAEQRLQYLLKQSDIFQHFGKG 180          
BLAST of mRNA_H-elongata_contig14044.2806.1 vs. uniprot
Match: A0A835YGX5_9STRA (Putative chromatin remodelling complex ATPase chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGX5_9STRA)

HSP 1 Score: 102 bits (253), Expect = 2.240e-21
Identity = 89/205 (43.41%), Postives = 107/205 (52.20%), Query Frame = 0
Query:    3 EIKSAASAYQLFQREKHGDVKATLEAKGQRADFGDVQRELSSRWKELTPQNADRARFEGLAAEDRARFQRESAQKDREVDEAQAAKRAARETLMVDSRMRGRPKAP----------EQQVRPK---SMAPPRVISEEERAFRQERQEAKQKEKAERDARLKVAQS---QHDSIKNEIAKQASARLQYLLKQSDIFKHFGAGKESA 191
            EIK A +A Q ++R+    V+A LEA+G   D G V RE+++RW  L   +  RA F  LAA+D+ARF  E AQ+D E  E  A  RA RE L+V      R   P          EQQ +P+   S A              ERQE        R AR KV  S   Q  +IK  IA+QA ARLQYLLKQSDIF HFG GKE A
Sbjct:    6 EIKPATTALQFYRRDADKQVRAALEAQGAPTDIGSVSREVNARWAALP--DDQRAGFLALAAQDKARFDDECAQRDAEAAERSARLRAEREELVVSGPRVSRAVLPSGGGGDGSDGEQQRKPRREVSAAEVERXXXXXXXXXXERQET-------RAARDKVEGSIKHQQSAIKAAIAQQAEARLQYLLKQSDIFSHFGIGKEQA 201          
BLAST of mRNA_H-elongata_contig14044.2806.1 vs. uniprot
Match: A0A7R9YFY7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YFY7_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 1.390e-16
Identity = 82/212 (38.68%), Postives = 114/212 (53.77%), Query Frame = 0
Query:    3 EIKSAASAYQLFQREKHGDVKATLEAKGQRADFGDVQRELSSRWKELTPQNADRARFEGLAAEDRARFQRESAQKDREVDEAQAAKRAARETLMVDSRMRGRPKAPEQQVRPKSMAPPRVISEEERAFRQERQEAKQKEKAERDARLKVAQSQHDSIKNEIAKQASARLQYLLKQSDIFKHFGAGKESAQAEEARKREASVAKEVSSPGKRR 214
            E++ A SA+  FQ  +H  +K   +     A   DV R ++ RW+ L+P  AD+  +E  A  DR RF  ESA  D    EAQA +RA RE L V S  R R +A  ++    S+  PR ++  ++A RQ  + A+      RDA ++  + ++ +   E   QAS RLQYLLKQSDIF+HFG G E      A K +A  A E  SP +RR
Sbjct:   20 EVRPAKSAWAFFQAAEHQRMKEG-DPDSASAPLPDVHRLIAERWRNLSP--ADKNIYEEQAKADRDRFDAESAAADAAALEAQARRRAERENLTV-SGSRKRTQAAAKEAPKLSIRKPRELTTAQKAKRQAVRNARNA----RDAHIEKGKEENKAFLQE---QASQRLQYLLKQSDIFQHFGRGAERKSPPRAEKAKAE-ASEPMSPSRRR 219          
BLAST of mRNA_H-elongata_contig14044.2806.1 vs. uniprot
Match: A0A0W8D9Y4_PHYNI (Uncharacterized protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8D9Y4_PHYNI)

HSP 1 Score: 84.3 bits (207), Expect = 2.770e-15
Identity = 64/182 (35.16%), Postives = 102/182 (56.04%), Query Frame = 0
Query:    7 AASAYQLFQREKHGDVKATLEAKG----QRADFGDVQRELSSRWKELTPQNADRARFEGLAAEDRARFQRESAQKDREVDEAQAAKRAARETLMVDSRMRGRPKAPEQQVRPKSMAPPRVISEEERAFRQERQEAKQKEKAERDARLKVAQSQHDSIKNEIAKQASARLQYLLKQSDIFKHF 184
            A +AYQ FQ+    DVK  + AK     +  + G + +E+S+RW +L+    DR  F  LAA+D+ R+  E   +D EV+  +A KR      +   R R + +   ++ RPK    PR ++E++   ++ RQE +Q+E  ERD      + Q +++  + ++ ASARL+YLL QSDIF HF
Sbjct:   28 AKTAYQFFQKRVVDDVKRDVAAKAAELNEPVELGSISKEISARWAQLSA--GDREEFVELAAQDKKRYDEECRARDEEVERERARKREEMYGAVEGKRERKKTQVVIEETRPKRQ--PRELTEKQLEAKRLRQEIRQQEIDERDELKAEEKRQKEALAKKKSEIASARLKYLLSQSDIFAHF 205          
BLAST of mRNA_H-elongata_contig14044.2806.1 vs. uniprot
Match: A0A7S1BX47_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BX47_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 2.850e-13
Identity = 71/169 (42.01%), Postives = 90/169 (53.25%), Query Frame = 0
Query:   30 GQRADFGDVQRELSSRWKELTPQNADRARFEGLAAEDRARFQRESAQKDREVDEAQAAKRAARETLMVDSRMRGRPKAP---------EQQVRPKSMAPPRVISEEERAFRQERQEAKQKEKAERDARLKVAQSQHDSIKNEIAKQASARLQYLLKQSDIFKHFGAGKE 189
            G  +  G+V R +S RW  L     +   +   A +DR RFQ E+A++DRE+ E QAA R AR    V    R R KA          E+  RP      R ISEEE A R      K++EKAE+D R+     Q + ++ E A QA  RLQYLLKQSDIF+HFG  KE
Sbjct:    5 GLNSSTGEVTRAVSERWHALDDDGKEH--YHNQAFDDRIRFQTEAAERDREIAERQAAAREARNNFSVSDEPR-RSKARNAYNSNLDYEESKRPIQH---RQISEEELASRN----MKRREKAEKDKRIN---DQKEVLRKERAAQAKKRLQYLLKQSDIFEHFGNVKE 160          
BLAST of mRNA_H-elongata_contig14044.2806.1 vs. uniprot
Match: W4FHL7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FHL7_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 1.750e-12
Identity = 67/188 (35.64%), Postives = 98/188 (52.13%), Query Frame = 0
Query:    9 SAYQLFQREKHGDVKATLEAKGQR----------ADFGDVQRELSSRWKELTPQNADRARFEGLAAEDRARFQRESAQKDREVDEAQAAKRAARETLMVDSRMRGRPKAPEQQVRPK-SMAPPRVISEEERAFRQERQEAKQKEKAERDARLKVAQSQHDSIKNEIAKQASARLQYLLKQSDIFKHFG 185
            SA+  FQ+     V+  L+ +G            A+ G VQRE+S+RW  LTP+  +R  F   A  DR R+  E   +DR+V+E +  +R  R  L VD + R R    E  V+ K    P + +++E+   +++R E  Q  K  +D      + Q + +K + A  ASARL YLL QSDIFKHFG
Sbjct:   17 SAFAHFQKHITSAVREELKNRGSTDITDVNDTDPANLGAVQREVSARWNNLTPE--EREPFLDAAKVDRERYDEECLLRDRQVEEERERRRQDRYALDVDGK-RERKVTVETIVKEKREKKPAKPLTDEQSETKRKRDEVSQLAKDAKDELRAEEERQKEDLKTKKANAASARLNYLLGQSDIFKHFG 201          
BLAST of mRNA_H-elongata_contig14044.2806.1 vs. uniprot
Match: A0A662XDI8_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XDI8_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 5.970e-12
Identity = 62/180 (34.44%), Postives = 92/180 (51.11%), Query Frame = 0
Query:    9 SAYQLFQREKHGDVKATLEAK----GQRADFGDVQRELSSRWKELTPQNADRARFEGLAAEDRARFQRESAQKDREVDEAQAAKRAARETLMVDSRMRGRPKAPEQQVRPKSMAPPRVISEEERAFRQERQEAKQKEKAERDARLKVAQSQHDSIKNEIAKQASARLQYLLKQSDIFKHF 184
            SAY LFQ+    DVK  L  +    G+  + G + +E+S+RW +L+    DR  F   AA D+ R+  E   +D EV+  Q  KR      +   R R +P               R +SE++   ++ RQE +Q+E  ERD      + Q D++  + ++ ASARL+YLL QSDIF HF
Sbjct:   36 SAYMLFQKHAMDDVKRDLATRAAERGEAFEPGSISKEMSARWSQLSA--VDREEFVEQAAADKQRYDDECRARDEEVEREQTRKREELYGAVEGKRERKKP---------------RELSEKQLEAKRLRQEIRQQELDERDELKAEERRQKDALAQKKSEIASARLKYLLSQSDIFAHF 198          
BLAST of mRNA_H-elongata_contig14044.2806.1 vs. uniprot
Match: D0MVY5_PHYIT (Chromatin-remodeling complex ATPase chain, putative n=14 Tax=Phytophthora TaxID=4783 RepID=D0MVY5_PHYIT)

HSP 1 Score: 73.9 bits (180), Expect = 1.090e-11
Identity = 62/182 (34.07%), Postives = 96/182 (52.75%), Query Frame = 0
Query:    7 AASAYQLFQREKHGDVKATLEAKG----QRADFGDVQRELSSRWKELTPQNADRARFEGLAAEDRARFQRESAQKDREVDEAQAAKRAARETLMVDSRMRGRPKAPEQQVRPKSMAPPRVISEEERAFRQERQEAKQKEKAERDARLKVAQSQHDSIKNEIAKQASARLQYLLKQSDIFKHF 184
            A +AYQ FQ+    DVK  + AK     +  + G + +E+S+RW +L+    DR  F  L   D+ R+  E   +D EV+  +A KR      +   R R       ++ RPK    PR +SE++   ++ R E +Q+E  ERD      + Q +++  + ++ ASARL+YLL QSDIF HF
Sbjct:   28 AKTAYQFFQKRVIDDVKRDVAAKAAELNEPVELGSISKEISARWVQLSA--GDREEFVELGTLDKKRYDEECRARDEEVERERARKREDMYGAVEGKRER-------KKTRPKRQ--PRELSEKQLEAKRLRHEIRQQEIDERDELKAEEKRQKEALAKKKSEIASARLKYLLSQSDIFAHF 198          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14044.2806.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LCC1_9PHAE2.980e-8066.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FV68_ECTSI7.990e-7466.67Probable chromatin remodelling complex ATPase chai... [more]
A0A7S1XV30_9STRA1.410e-2244.26Hypothetical protein (Fragment) n=4 Tax=Phaeomonas... [more]
A0A835YGX5_9STRA2.240e-2143.41Putative chromatin remodelling complex ATPase chai... [more]
A0A7R9YFY7_9STRA1.390e-1638.68Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A0W8D9Y4_PHYNI2.770e-1535.16Uncharacterized protein n=1 Tax=Phytophthora nicot... [more]
A0A7S1BX47_9STRA2.850e-1342.01Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
W4FHL7_9STRA1.750e-1235.64Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A662XDI8_9STRA5.970e-1234.44Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
D0MVY5_PHYIT1.090e-1134.07Chromatin-remodeling complex ATPase chain, putativ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 123..143
NoneNo IPR availableCOILSCoilCoilcoord: 67..94
IPR009071High mobility group box domainSMARTSM00398hmgende2coord: 3..79
e-value: 9.4E-7
score: 38.4
IPR009071High mobility group box domainPFAMPF09011HMG_box_2coord: 5..77
e-value: 3.7E-9
score: 37.1
IPR009071High mobility group box domainPROSITEPS50118HMG_BOX_2coord: 4..78
score: 11.894
IPR036910High mobility group box domain superfamilyGENE3D1.10.30.10coord: 3..79
e-value: 1.4E-10
score: 43.4
IPR036910High mobility group box domain superfamilySUPERFAMILY47095HMG-boxcoord: 4..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig14044contigH-elongata_contig14044:1323..6320 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig14044.2806.1mRNA_H-elongata_contig14044.2806.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig14044 1323..7583 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig14044.2806.1 ID=prot_H-elongata_contig14044.2806.1|Name=mRNA_H-elongata_contig14044.2806.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=214bp
MSEIKSAASAYQLFQREKHGDVKATLEAKGQRADFGDVQRELSSRWKELT
PQNADRARFEGLAAEDRARFQRESAQKDREVDEAQAAKRAARETLMVDSR
MRGRPKAPEQQVRPKSMAPPRVISEEERAFRQERQEAKQKEKAERDARLK
VAQSQHDSIKNEIAKQASARLQYLLKQSDIFKHFGAGKESAQAEEARKRE
ASVAKEVSSPGKRR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009071HMG_box_dom
IPR036910HMG_box_dom_sf