prot_H-elongata_contig139973.2785.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig139973.2785.1
Unique Nameprot_H-elongata_contig139973.2785.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length156
Homology
[Close]
BLAST of mRNA_H-elongata_contig139973.2785.1 vs. uniprot
Match: A0A6H5KQQ6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQQ6_9PHAE)

HSP 1 Score: 234 bits (596), Expect = 8.370e-75
Identity = 146/149 (97.99%), Postives = 149/149 (100.00%), Query Frame = 0 
Query:    4 VVSRVNSDLFGGTDAVVKYVLEGHDRGVNWASFHPTLPLVISGADDRQVKLWRMNETKAWEVHTMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDISQRMGVQTFRRENDRFWILAAHPEQNLLAAGHDSGMIVFKLERERPAYDTH 152
            +VS++NSDLFGGTDAVVKYVLEGHDRGVNWASFHPTLPLVISGADDRQVKLWRMNETKAWEVHTMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDISQRMGVQTFRRENDRFWILAAHPEQNLLAAGHDSGMIVFKLERERPAYDTH
Sbjct:    1 MVSKMNSDLFGGTDAVVKYVLEGHDRGVNWASFHPTLPLVISGADDRQVKLWRMNETKAWEVHTMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDISQRMGVQTFRRENDRFWILAAHPEQNLLAAGHDSGMIVFKLERERPAYDTH 149
[Close]
BLAST of mRNA_H-elongata_contig139973.2785.1 vs. uniprot
Match: D8LL95_ECTSI (Coatomer subunit alpha n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL95_ECTSI)

HSP 1 Score: 243 bits (619), Expect = 1.530e-71
Identity = 150/156 (96.15%), Postives = 154/156 (98.72%), Query Frame = 0 
Query:    1 HEDVVSRVNSDLFGGTDAVVKYVLEGHDRGVNWASFHPTLPLVISGADDRQVKLWRMNETKAWEVHTMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDISQRMGVQTFRRENDRFWILAAHPEQNLLAAGHDSGMIVFKLERERPAYDTHGDCL 156
            H+D+VS++NSDLFGGTDAVVKYVLEGHDRGVNWASFHPTLPLVISGADDRQVKLWRMNETKAWEVHTMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDISQRMGVQTFRRENDRFWILAAHPEQNLLAAGHDSGMIVFKLERERPAYDTHG  L
Sbjct:  181 HDDMVSKMNSDLFGGTDAVVKYVLEGHDRGVNWASFHPTLPLVISGADDRQVKLWRMNETKAWEVHTMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDISQRMGVQTFRRENDRFWILAAHPEQNLLAAGHDSGMIVFKLERERPAYDTHGSRL 336
[Close]
BLAST of mRNA_H-elongata_contig139973.2785.1 vs. uniprot
Match: A0A835Z8J6_9STRA (Coatomer subunit alpha n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8J6_9STRA)

HSP 1 Score: 234 bits (597), Expect = 1.450e-68
Identity = 144/155 (92.90%), Postives = 151/155 (97.42%), Query Frame = 0 
Query:    2 EDVVSRVNSDLFGGTDAVVKYVLEGHDRGVNWASFHPTLPLVISGADDRQVKLWRMNETKAWEVHTMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDISQRMGVQTFRRENDRFWILAAHPEQNLLAAGHDSGMIVFKLERERPAYDTHGDCL 156
            + +V+RVN+DLFGGTDA+VKYVLEGHDRGVNWASFHPTLPLV+SGADDRQVKLWRMNETKAWEVHTMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDISQRMGVQ FRRENDRFWILAAHPEQNLLAAGHDSGMIVFKLERERPAYD+H  CL
Sbjct:  181 DTMVARVNTDLFGGTDAIVKYVLEGHDRGVNWASFHPTLPLVVSGADDRQVKLWRMNETKAWEVHTMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDISQRMGVQNFRRENDRFWILAAHPEQNLLAAGHDSGMIVFKLERERPAYDSHAACL 335
[Close]
BLAST of mRNA_H-elongata_contig139973.2785.1 vs. uniprot
Match: A0A7S2V4C4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4C4_9STRA)

HSP 1 Score: 224 bits (572), Expect = 3.770e-66
Identity = 141/154 (91.56%), Postives = 148/154 (96.10%), Query Frame = 0 
Query:    3 DVVSRVNSDLFGGTDAVVKYVLEGHDRGVNWASFHPTLPLVISGADDRQVKLWRMNETKAWEVHTMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDISQRMGVQTFRRENDRFWILAAHPEQNLLAAGHDSGMIVFKLERERPAYDTHGDCL 156
            ++V+RVN+DLFGG DAVVKYVLEGHDRGVNWASFHPTLPLVISGADDRQVKLWRMNETKAWEV TM XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIS+R+GVQTFRRENDRFWILAAHPEQNLLAAGHDSGMIVFKLERERPAYD H + L
Sbjct:  183 NMVARVNADLFGGNDAVVKYVLEGHDRGVNWASFHPTLPLVISGADDRQVKLWRMNETKAWEVDTMRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDISKRLGVQTFRRENDRFWILAAHPEQNLLAAGHDSGMIVFKLERERPAYDVHDNRL 336
[Close]
BLAST of mRNA_H-elongata_contig139973.2785.1 vs. uniprot
Match: F0YGR3_AURAN (Coatomer subunit alpha n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGR3_AURAN)

HSP 1 Score: 223 bits (568), Expect = 1.250e-64
Identity = 140/149 (93.96%), Postives = 145/149 (97.32%), Query Frame = 0 
Query:    4 VVSRVNSDLFGGTDAVVKYVLEGHDRGVNWASFHPTLPLVISGADDRQVKLWRMNETKAWEVHTMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDISQRMGVQTFRRENDRFWILAAHPEQNLLAAGHDSGMIVFKLERERPAYDTH 152
            VVSRVN+DLFGG DAVVKYVLEGHDRGVNWASFHPTLPL+ISGADDRQVKLWRMNETKAWEV TM XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIS+R+GVQTFRRENDRFWILAAHPEQNLLAAGHDSGMIVFKLERERPAY +H
Sbjct:  185 VVSRVNADLFGGNDAVVKYVLEGHDRGVNWASFHPTLPLIISGADDRQVKLWRMNETKAWEVDTMRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDISKRLGVQTFRRENDRFWILAAHPEQNLLAAGHDSGMIVFKLERERPAYASH 333
[Close]
BLAST of mRNA_H-elongata_contig139973.2785.1 vs. uniprot
Match: A0A8J2X1H8_9STRA (Coatomer subunit alpha n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X1H8_9STRA)

HSP 1 Score: 221 bits (563), Expect = 6.150e-64
Identity = 140/153 (91.50%), Postives = 146/153 (95.42%), Query Frame = 0 
Query:    4 VVSRVNSDLFGGTDAVVKYVLEGHDRGVNWASFHPTLPLVISGADDRQVKLWRMNETKAWEVHTMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDISQRMGVQTFRRENDRFWILAAHPEQNLLAAGHDSGMIVFKLERERPAYDTHGDCL 156
            VVSRVN+DLFGG DA+VKYVLEGHDRGVNWASFHPTLPLVISGADDRQVKLWRMNETKAWEV TM XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIS+R+GVQTFRRENDRFWILAAHP QNLLAAGHDSGMIVFKLERERPA+ +H D L
Sbjct:  201 VVSRVNADLFGGNDAIVKYVLEGHDRGVNWASFHPTLPLVISGADDRQVKLWRMNETKAWEVDTMRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDISKRLGVQTFRRENDRFWILAAHPVQNLLAAGHDSGMIVFKLERERPAFGSHLDTL 353
[Close]
BLAST of mRNA_H-elongata_contig139973.2785.1 vs. uniprot
Match: F0YHJ1_AURAN (Coatomer subunit alpha n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHJ1_AURAN)

HSP 1 Score: 219 bits (558), Expect = 2.850e-63
Identity = 138/149 (92.62%), Postives = 145/149 (97.32%), Query Frame = 0 
Query:    4 VVSRVNSDLFGGTDAVVKYVLEGHDRGVNWASFHPTLPLVISGADDRQVKLWRMNETKAWEVHTMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDISQRMGVQTFRRENDRFWILAAHPEQNLLAAGHDSGMIVFKLERERPAYDTH 152
            VVSRVN+DLFGG DA+VKYVLEGHDRGVNWASFHPTLPLVISGADDRQVKLWRMNETKAWEV TM XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIS+R+GVQTFRRENDRFWILAAHPEQNLLAAGHDSGMIVFKLERERPA+ ++
Sbjct:  175 VVSRVNADLFGGNDAIVKYVLEGHDRGVNWASFHPTLPLVISGADDRQVKLWRMNETKAWEVDTMRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDISKRLGVQTFRRENDRFWILAAHPEQNLLAAGHDSGMIVFKLERERPAFASY 323
[Close]
BLAST of mRNA_H-elongata_contig139973.2785.1 vs. uniprot
Match: UPI0010AB01D5 (coatomer subunit alpha-1-like n=1 Tax=Malus domestica TaxID=3750 RepID=UPI0010AB01D5)

HSP 1 Score: 203 bits (517), Expect = 3.420e-63
Identity = 126/152 (82.89%), Postives = 141/152 (92.76%), Query Frame = 0 
Query:    5 VSRVNSDLFGGTDAVVKYVLEGHDRGVNWASFHPTLPLVISGADDRQVKLWRMNETKAWEVHTMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDISQRMGVQTFRRENDRFWILAAHPEQNLLAAGHDSGMIVFKLERERPAYDTHGDCL 156
            +S++N+D FGG DAVVKYVLEGHDRGVNWASFHPTLPL++SGADDRQVKLWRMN+TKAWEV T+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD ++R G+QTFRRE+DRFWIL+AHPE NLLAAGHDSGMIVFKLERERPA+   GD +
Sbjct:   43 LSQMNADFFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNDTKAWEVDTLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDATKRTGLQTFRREHDRFWILSAHPEMNLLAAGHDSGMIVFKLERERPAFSVSGDSM 194
[Close]
BLAST of mRNA_H-elongata_contig139973.2785.1 vs. uniprot
Match: A0A7S2RES0_9STRA (Coatomer subunit alpha n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RES0_9STRA)

HSP 1 Score: 219 bits (557), Expect = 4.030e-63
Identity = 138/152 (90.79%), Postives = 146/152 (96.05%), Query Frame = 0 
Query:    2 EDVVSRVNSDLFGGTDAVVKYVLEGHDRGVNWASFHPTLPLVISGADDRQVKLWRMNETKAWEVHTMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDISQRMGVQTFRRENDRFWILAAHPEQNLLAAGHDSGMIVFKLERERPAYDTHG 153
            + VVSRVN+DLFG  DA+VKYVLEGHDRGVNWASFHPTLPLV+SGADDRQVKLWRMNETKAWEV T+XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIS+RMG+QTFRRENDRFWILAAHPEQNLLAAGHD+GMIVFKLERERPAYD  G
Sbjct:  183 DTVVSRVNADLFGSADALVKYVLEGHDRGVNWASFHPTLPLVVSGADDRQVKLWRMNETKAWEVDTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDISRRMGIQTFRRENDRFWILAAHPEQNLLAAGHDTGMIVFKLERERPAYDICG 334
[Close]
BLAST of mRNA_H-elongata_contig139973.2785.1 vs. uniprot
Match: A0A5B7BTD6_DAVIN (Uncharacterized protein (Fragment) n=1 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B7BTD6_DAVIN)

HSP 1 Score: 201 bits (510), Expect = 6.270e-63
Identity = 124/152 (81.58%), Postives = 140/152 (92.11%), Query Frame = 0 
Query:    5 VSRVNSDLFGGTDAVVKYVLEGHDRGVNWASFHPTLPLVISGADDRQVKLWRMNETKAWEVHTMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDISQRMGVQTFRRENDRFWILAAHPEQNLLAAGHDSGMIVFKLERERPAYDTHGDCL 156
            +S++N+D FGG DAVVKYVLEGHDRGVNWASFHPTLPL++SGADDRQVK+WRMN+TKAWEV T+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD ++R G+QTFRRE+DRFW+LA+HPE NLLAAGHDSGMIVFKLERE PA+   GD L
Sbjct:    5 LSQMNTDFFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKIWRMNDTKAWEVDTLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSTKRTGLQTFRREHDRFWVLASHPEMNLLAAGHDSGMIVFKLEREHPAFSVSGDSL 156
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig139973.2785.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KQQ6_9PHAE8.370e-7597.99Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LL95_ECTSI1.530e-7196.15Coatomer subunit alpha n=1 Tax=Ectocarpus siliculo... [more]
A0A835Z8J6_9STRA1.450e-6892.90Coatomer subunit alpha n=1 Tax=Tribonema minus Tax... [more]
A0A7S2V4C4_9STRA3.770e-6691.56Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
F0YGR3_AURAN1.250e-6493.96Coatomer subunit alpha n=1 Tax=Aureococcus anophag... [more]
A0A8J2X1H8_9STRA6.150e-6491.50Coatomer subunit alpha n=1 Tax=Pelagomonas calceol... [more]
F0YHJ1_AURAN2.850e-6392.62Coatomer subunit alpha n=1 Tax=Aureococcus anophag... [more]
UPI0010AB01D53.420e-6382.89coatomer subunit alpha-1-like n=1 Tax=Malus domest... [more]
A0A7S2RES0_9STRA4.030e-6390.79Coatomer subunit alpha n=1 Tax=Rhizochromulina mar... [more]
A0A5B7BTD6_DAVIN6.270e-6381.58Uncharacterized protein (Fragment) n=1 Tax=Davidia... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 17..56
e-value: 1.4E-5
score: 34.6
coord: 61..100
e-value: 5.9E-9
score: 45.7
coord: 103..141
e-value: 130.0
score: 3.7
IPR001680WD40 repeatPFAMPF00400WD40coord: 64..100
e-value: 2.1E-7
score: 31.5
coord: 22..55
e-value: 6.4E-5
score: 23.6
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 24..65
score: 12.714
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 68..109
score: 16.624
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..143
e-value: 3.1E-51
score: 176.0
NoneNo IPR availablePANTHERPTHR19876:SF38coord: 12..156
NoneNo IPR availablePANTHERPTHR19876COATOMERcoord: 12..156
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 24..150
score: 24.205
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 19..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig139973contigH-elongata_contig139973:411..1615 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig139973.2785.1mRNA_H-elongata_contig139973.2785.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig139973 411..1615 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig139973.2785.1 ID=prot_H-elongata_contig139973.2785.1|Name=mRNA_H-elongata_contig139973.2785.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=156bp
HEDVVSRVNSDLFGGTDAVVKYVLEGHDRGVNWASFHPTLPLVISGADDR
QVKLWRMNETKAWEVHTMNGHTNNVSCVIFHPKRELIVSNSEDRSIRVWD
ISQRMGVQTFRRENDRFWILAAHPEQNLLAAGHDSGMIVFKLERERPAYD
THGDCL
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf