prot_H-elongata_contig139775.2767.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig139775.2767.1
Unique Nameprot_H-elongata_contig139775.2767.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length55
Homology
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BLAST of mRNA_H-elongata_contig139775.2767.1 vs. uniprot
Match: A0A6H5KR75_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KR75_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 3.710e-17
Identity = 39/55 (70.91%), Postives = 44/55 (80.00%), Query Frame = 0 
Query:    1 MAVEKGLPPVWLGLDLSTQSLTLVVLPDRTSERHVYLDSVIYARDLPQYQTEHGM 55
            M  E  LPP+WLG+DLSTQSLTLVVL D  +  HVYLDSV+Y  +LPQYQTEHGM
Sbjct:    1 MISEDPLPPLWLGVDLSTQSLTLVVLDDDPAADHVYLDSVVYDTELPQYQTEHGM 55
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig139775.2767.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KR75_9PHAE3.710e-1770.91Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.420.40coord: 2..55
e-value: 3.3E-10
score: 41.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig139775contigH-elongata_contig139775:1339..1503 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig139775.2767.1mRNA_H-elongata_contig139775.2767.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig139775 1339..1503 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig139775.2767.1 ID=prot_H-elongata_contig139775.2767.1|Name=mRNA_H-elongata_contig139775.2767.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=55bp
MAVEKGLPPVWLGLDLSTQSLTLVVLPDRTSERHVYLDSVIYARDLPQYQ
TEHGM
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