prot_H-elongata_contig139257.2737.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig139257.2737.1
Unique Nameprot_H-elongata_contig139257.2737.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length270
Homology
BLAST of mRNA_H-elongata_contig139257.2737.1 vs. uniprot
Match: D7FZY2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY2_ECTSI)

HSP 1 Score: 139 bits (351), Expect = 1.120e-33
Identity = 100/272 (36.76%), Postives = 133/272 (48.90%), Query Frame = 0
Query:    2 LPKNQTFELTFEQPEKFGYSPSALTLGVSIDGGSRRLGRKGGERGSSLPPTFNDLPPASFPDLFRHSTAPVISGSPPAAGD-EKLGFFVQWPLKAASSTTAIGDRVGGKSQFMKNSGRSHQRTFTDYRCDSLGSAAEWDNTLEGDLDLSLAHKPRAPSGSGSGWQLWPRSSS--TKTPPRPXXXXXXXXXISPPPRNGNQTGPSVDGLRGGGDTESAKGTKGLKAEEEGLWAVGRAWKALRAHRDDDALQATIRAAAAVTSIVSKHLRKRSQ 270
            LP++Q F LT E+P KFGYSP     G                  S +P   + LPPA+ PDL R  TAP ++    + G  E  G F +WP KA  +  + GD         KN G     T+TD R DSLGSAAEWD TLEG+LDLSLA + + P   G   + +P ++   + T PRP             P    +      G RGGG    A   K  ++      AVG AW+A +A+   D+L AT+ AA   TSI  +H+RKR++
Sbjct:  863 LPEDQAFNLTLEEPTKFGYSPGLAVAGXXXXXXXXXXXXXASNIASPIP-DGDWLPPAA-PDLLRRQTAPAMTPPSSSLGHVEAGGAFTRWPPKAPPAHASDGDGAEESGDGAKNRGHQRSGTYTDLRADSLGSAAEWDRTLEGELDLSLAQRNQTPVMVGPSLKKFPVAAGNVSGTVPRPKARRGGKSLPGRVPSKPAE----ASGCRGGGGAAGAIKIKSPRS------AVGIAWEAFKANGGGDSLPATLSAAMTATSIAVEHVRKRTR 1122          
BLAST of mRNA_H-elongata_contig139257.2737.1 vs. uniprot
Match: A0A6H5KL36_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL36_9PHAE)

HSP 1 Score: 124 bits (312), Expect = 1.720e-28
Identity = 106/279 (37.99%), Postives = 143/279 (51.25%), Query Frame = 0
Query:    2 LPKNQTFELTFEQPEKFGYSPSALTLGVSIDGGSRRLGRKGGERG----SSLPPTFNDLPPASFPDLFRHSTAPVISGSPPAAGDEKLG-FFVQWPLKAA---SSTTAIGDRVGGKSQFMKNSGRSHQRTFTDYRCDSLGSAAEWDNTLEGDLDLSLAHKPRAPSGSGSGWQLWPRSSS--TKTPPRPXXXXXXXXXISPPPRNGNQTGPSVDGLRGGGDTESAKGTKGLKAEEEGLWAVGRAWKALRAHRDDDALQATIRAAAAVTSIVSKHLRKRSQ 270
            LP++Q F+LT E+P KFGYSP     GV++ GGS               +S  P  N LPPA+ P L R  TAP  +    + G   +G  F  WP KA    +S  A+ +  G  +   KN G     T+TD R DSLGSAAEWD TLEG+LDLSLA + + P   G   + +  S+   + T PRP          S P R  ++   + D  RGGG   +A G   +K+      AV  AW+A +A+   D+L AT+ AA   TSI  KH+ KR++
Sbjct:  727 LPEDQAFKLTLEEPTKFGYSP-----GVAVAGGSXXXXXXXXXXXXXXIASPIPDGNWLPPAA-PALLRRQTAPARTPPSSSLGHMNVGGAFTSWPPKATPAHASDEAVAEESGVGA---KNRGHQRSGTYTDLRADSLGSAAEWDWTLEGELDLSLAQRSQTPVMVGPSLKKFTVSAGNVSGTVPRPQARRDGK---SLPGRVPSKPAEASD-CRGGG---AAAGATKIKSPHS---AVRIAWEAFKANGGGDSLPATLSAAMTATSIAVKHVSKRTR 986          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig139257.2737.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FZY2_ECTSI1.120e-3336.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KL36_9PHAE1.720e-2837.99Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig139257contigH-elongata_contig139257:366..1531 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig139257.2737.1mRNA_H-elongata_contig139257.2737.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig139257 366..1531 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig139257.2737.1 ID=prot_H-elongata_contig139257.2737.1|Name=mRNA_H-elongata_contig139257.2737.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=270bp
DLPKNQTFELTFEQPEKFGYSPSALTLGVSIDGGSRRLGRKGGERGSSLP
PTFNDLPPASFPDLFRHSTAPVISGSPPAAGDEKLGFFVQWPLKAASSTT
AIGDRVGGKSQFMKNSGRSHQRTFTDYRCDSLGSAAEWDNTLEGDLDLSL
AHKPRAPSGSGSGWQLWPRSSSTKTPPRPSAAAASAALISPPPRNGNQTG
PSVDGLRGGGDTESAKGTKGLKAEEEGLWAVGRAWKALRAHRDDDALQAT
IRAAAAVTSIVSKHLRKRSQ
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