prot_H-elongata_contig13908.2719.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig13908.2719.1
Unique Nameprot_H-elongata_contig13908.2719.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length57
Homology
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BLAST of mRNA_H-elongata_contig13908.2719.1 vs. uniprot
Match: D8LHB1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHB1_ECTSI)

HSP 1 Score: 78.6 bits (192), Expect = 1.260e-15
Identity = 34/57 (59.65%), Postives = 43/57 (75.44%), Query Frame = 0 
Query:    1 LEFGNSGIWEHVDRRVGTATGGRIMNAMIAGILVTIPLPNEAFCAWKKRTSSVSEPG 57
            +E GN+G+WEH++   GT TGG IM  MIAGI V++PLP EAFCAWK+R+S    PG
Sbjct:  293 VEVGNTGVWEHMEGEDGTPTGGTIMKVMIAGIEVSVPLPPEAFCAWKQRSSPAGLPG 349
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13908.2719.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LHB1_ECTSI1.260e-1559.65Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13908contigH-elongata_contig13908:1741..2319 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13908.2719.1mRNA_H-elongata_contig13908.2719.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig13908 1741..2319 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig13908.2719.1 ID=prot_H-elongata_contig13908.2719.1|Name=mRNA_H-elongata_contig13908.2719.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=57bp
LEFGNSGIWEHVDRRVGTATGGRIMNAMIAGILVTIPLPNEAFCAWKKRT
SSVSEPG
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