prot_H-elongata_contig13878.2702.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig13878.2702.1
Unique Nameprot_H-elongata_contig13878.2702.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length1313
Homology
BLAST of mRNA_H-elongata_contig13878.2702.1 vs. uniprot
Match: D7G8X5_ECTSI (Similar to Fe65 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8X5_ECTSI)

HSP 1 Score: 311 bits (797), Expect = 3.850e-84
Identity = 464/1347 (34.45%), Postives = 572/1347 (42.46%), Query Frame = 0
Query:   75 GSNPLMGLVYYGSDSDEEGSSARDGSSPTGSKENTDRGATADAPSNAAASESPVAMAAANTTEDTELNLPNGWQQCMDNSGAIYFWNPGSGETTWEMPAGTVYRKGSSTPASSALSSNSDVAINSTPREAVSGANDGDRVASDGTSDTASESGEGE--------EENGEMKRSTGSAS--------ATLVSSTTTEDATGALAGDIEHPPG--PEEVSDSVESDPLRKSRSQSDVDDNPRADVDXXXXXXXXXXXXXXXXX------DDLLADIEAEMLSGIGGGAGRGADDADK----AAHPAKDTKPA--QEDFSPLREIASGLDVRAQRSHAELIELFTAAEEEDATEVGRKA-DGTRVKRRLRVELGAVLQARISDWREGG-LDGAFLVRKLEEMAVQARSSLLDDRVTASSSQADEMLSLANXXXXEKFIATAAAAVASSNPPGEIDPPSDAVDGLSRDQEKVSPSKPSLKNKKERDKPKKGRWRGGGEENGGKEAFGSNDRGNEGHEDSGRALHDAASENSSRTAAEALREAETAEKLRWADKVSAAAXXXXXXXXXXXX--------EAVAR-------EKAMTDRRPSSSPRQQG-----------------------------EGENDL----DEILPSAEDEPREEGEIVLIPKASVTSASTEGEVSIVSNEVDAEEDGEGDNETIKVQPMEAQPAKCGKASEKYTTHRHSGFH-APDPSRVTMSGSSAFSFSGWAAIWDNDHSAYYYHNLATDETTWVLPRAQETKATPAEKEPPAPSSSSSSPSSV------KTSLTPAGRDALKIGDEKRQVEEKNPRK-------------PLKRWQKSTGKQAGREQAEALPPMPRRGDGKTATLEPEGSAAEEGASAASTTPVKAMASGTDKSSVREEKA---------AXXXXXXXXXXXXXXXXXTNPEPGARHEAGELPRYGLGNPFAAAPASSGVWSEIPSVIPSESRVYSGTNLVYMVLDEEQASLSFSLSLLRSPRLLDRGRFFESFASTNKTSWVRPSAPSPVDKAKEEFQGNKVEEASPTLTSCDPAPPLPSATVDMRPSTLVWWSDAGDVWNGESLSGLLVGYGPRRYRNLGGGYYMITLELGTEWAAAAIAALGQGADDPVSAARVDWVCCIASAPGYGLFLRWAGDDDEKKLFDVPDELFDDPQPDPAVAVTDEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAXAAVAATEXXXXXXXXXXXXXVAKAAPFASTSKKRRNNKSSGMGATSGSISKKRKGAASLIDKWKAVASNAGEEAEREAEKMEKMERWKARAAALDPDNPNFIPLGRKRR 1312
            G NPLMGL++YGSDS+     A+                         AS S V+    +  E     LP GWQQCMDN+G +YFWN  +G+T+W+ P GT  RK S   ASSA+ + S+ A    P      A+      SD TSDTASE+ E +        E+ G  +                + V   T E   GA++G+ E      P+    S    P  + R  + V +  + + +                       DDLLA IEAE+L G G G G    D D+    A     DT+    +EDF+PL+E+A GLDVRAQ +HAEL  L   A E    E G    + T    RL +EL AVL+AR+SDWR+G  +DG        E A+ A SS    R                     + +  +   +A   P  +  P S  V  L R       S P                                                           +A+R A  AEKL+WAD+VSAAAXXXXXXXXXXXX        E+ A+       E+ +TD   S+S R+                               EG  DL    D          +E+GE+ ++P A+   A+T G                               AK    S        SG   A DP+   +        SGW+A++D  H AYYYHNL TDET+WVLP      AT AE  P                   K S    G DA   G E+R       R+                    S GK     + +      RR D  +     E S  E+ A AAST    A A   D +S+ E  +                           T+ +P                                                           +   S   SP         ES               +   KA    + +    A+P  ++     P  S  VD+RP TLVWWSDAGDVWNG SLSGLL GYGPRRYRNLGGGYYM TLE G EWA AA+AALGQG  DPV+AAR+DWV C ASAPGYGLFLR++G+DDE+KLFDVPDE FD               XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX X       XXXXXXXXXXXXX              +   SS  G + GSI KKRKGAA+LIDKWKAVAS AGEEAE+EAEK EKMERWKARAAA+DPDNPNF P+G++RR
Sbjct:   61 GKNPLMGLLHYGSDSEXXXXXAQQ-----------------------PASASSVSTPDPSPAESVTYTLPTGWQQCMDNAGLVYFWNTETGDTSWDPPEGTE-RKVSK--ASSAVDTPSE-APPIVPEAVADAASREAPAGSDATSDTASEAEEDKAVAXXXXXEDEGASRXXXXXXXXXXXXXXXVSEVCVDTEEVEKGAVSGEQEVADSAIPKRSPRSATDRPAAQDRRMAAVGEEQKGEEELPQQSKSTGTGSSDVPVAATAGIDDLLAGIEAELLLGAGDGEGDLDGDKDEVKGSAVEENGDTRATGEEEDFAPLQEVAPGLDVRAQEAHAELAALLAVAAEGKGEEAGLSVVEATDPSVRLGIELAAVLRARLSDWRQGECMDGI-------EAALTAPSSFSSSR-----------------RWRWRLVQPSVRLLA---PQHQRRPDSLKV-RLGRSSPLPLMSSP-----------------------------------------------------------QAVRAARNAEKLKWADEVSAAAXXXXXXXXXXXXXXXXXAKAESEAKVAVIGTVEEGVTDSEGSNSDRRGKHAASGDDATSDKRKNATSTDTLATARAIVEGTIDLGGVGDXXXXXXXXXXKEDGEVTVVPAATEGGAATSG-------------------------------AKDDAPSVPAPDTSESGIVIAKDPTLPDVP-------SGWSAVFDTTHQAYYYHNLTTDETSWVLP------ATVAESHPAXXXXXXXXXXXXXXXXXSKKSKADEG-DASTGGGERRSESSNRSRRRGSPGDEXXXXXXXXXXXSNSAGKSV---ETKLEKRSSRRRDVASGAASSEASQDEKPAPAAST---DAAAKEGDSASIPESLSRIDNSTWVPVWDDNHQAFYYHDTVTDETSWDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPGGAQQRS--PSPEPSTASPNAESXXXXXXXXXXXXXVTADAPKAHSATEEDVATAATPAASAAAAEAPTTSV-VDLRPCTLVWWSDAGDVWNGVSLSGLLGGYGPRRYRNLGGGYYMTTLERGPEWATAAVAALGQGVADPVAAARMDWVSCTASAPGYGLFLRFSGEDDEQKLFDVPDEYFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKG--SSATGKSGGSIGKKRKGAANLIDKWKAVASTAGEEAEKEAEKQEKMERWKARAAAMDPDNPNFTPIGKRRR 1237          
BLAST of mRNA_H-elongata_contig13878.2702.1 vs. uniprot
Match: A0A6H5JJN1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJN1_9PHAE)

HSP 1 Score: 185 bits (469), Expect = 8.550e-44
Identity = 286/863 (33.14%), Postives = 374/863 (43.34%), Query Frame = 0
Query:   75 GSNPLMGLVYYGSDSDEEGSSARDGSSPTGSKENTDRGATADAPSNAAASESPVAMAAANTTEDTELNLPNGWQQCMDNSGAIYFWNPGSGETTWEMPAGTVYRKGSSTPA----SSALSSNSDVAINSTPREAVSGANDGDRVASDGTSDTASESGEGEE--------ENGEMKRSTGS-----ASATLVSST---TTEDATGALAGDIE---HPPGPEEVSDSVESDPLRKSRSQSDVDDNPRADVDXXXXXXXXXXXXXXXXX------DDLLADIEAEMLSGIGGGAGRGADDADK------AAHPAKDTKPA--QEDFSPLREIASGLDVRAQRSHAELIELFTAAEEEDATEVGRKA-DGTRVKRRLRVELGAVLQARISDWREG---------GLDGAFLVRKLEEMAVQARSSL------LDDRVTASSSQADEMLSLANXXXXEKFIATAAAAVASSNPPGEIDPPSDAVDGLSRDQEKVSPSKPSLKNKKERDKPKKGRWRGGGEENGGKEAFGSNDRGNEGHEDSGRALHDAASENSSRTAA------EALREAETAEKLRWADKVSAAAXXXXXXXXXXXXEAVAR---------------EKAMTDRRPSSSPRQQGEGENDLDEILPSAEDEPREEGEIVLIPKASVTSASTEGEV-SIVSNEVDAEEDGEGDNETIKVQPMEAQP----------------AKCGKASEKYTTHRHSGFH-APDPSRVTMSGSSAFSFSGWAAIWDNDHSAYYYHNLATDETTWVLPRAQETKATPAEKEPPAPSSSSSSPS------SVKTSLTPAGRDALKIGDEKRQVEEKNPRKPLKRWQKSTGKQAGREQAEA 839
            G NPLMGL++YGSDS+EE                       + P+   AS S V+    +  E     LP GWQQCMDN+G +YFWN  +G+T+W+ P GT  +   ++ A    S AL    +   ++  REA +G        SD TSDTASE+ E +         + G  + ST S     A+A  VS     T E   GA++G  E       P+    S    P  + R  + V +  +   +                       DDLLA IEAE+L  +GGG G G  D DK      A     DT+    ++DF+PLRE+A GLD RAQ++HAEL  L   A E    E G      T    RL +EL AVL+AR+SDWR+G         GLDG F V KLEEMA +ARS+L         R T  S Q+     LA         A  A + A S P     PP DA +   RD   VS  K S  + K+R + +    +    +NG   +  S D   +G  +   A H      SS TA+       A+R A  AEKL+WAD+VSA  XXXXXXXXXXXX                    EK +TD + S+S R++        +   S +D   ++       +   TS  T     +IV   +D    G GD                             AK   AS      R SG   A DP+   +        SGW+A++D  H AYYYHNL TDET+WVLP      AT AE  P    S  SSP        +K S    G  +   G+  R+ E  N    L R + S G + GRE AEA
Sbjct:   57 GKNPLMGLLHYGSDSEEE-----------------------EPPAQKPASASSVSTPDPSPAESLTYTLPTGWQQCMDNAGLVYFWNTETGDTSWDPPEGTQTKVSKTSSAVDTPSEALPIVPEAVADAASREAPAG--------SDATSDTASEAEEDKAVALAGVTVDEGANRASTNSSGVAGAAAPAVSKVGVDTEEVEEGAVSGGQEAADRGATPKGSPRSAADPPAAQDRRMTAVGEEQKGGEELPQQSKSTGTGSSDVPVAATAGIDDLLAGIEAELL--LGGGDGEGKLDGDKDEAKDSAVEENGDTRSTGEEQDFAPLREVAPGLDARAQKAHAELAALLAVAAEGKGEEAGSSVVQATDPSVRLGIELAAVLRARLSDWRQGKCMDRIGVGGLDGTFFVLKLEEMAAEARSALGPSSCPTAHRATGQS-QSQTRPELAASMDAITPGAMGAVSSAGSLPDVADPPPGDAAE---RDATAVSDGKKSKGHSKKRPRVRGAATKAASADNGEAVSTRSVD---DGVAEGVPASHATDDNASSSTASGXXXXXXAVRAARNAEKLKWADEVSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGTVEKEVTDSQGSNSDRRR--------KHAASGDDATSDK-------RNHATSTDTLATARAIVEGTIDL--GGVGDXXXXXXXXXXXXXXXXXXXXXXXXXATAGAKDDAASVPAPDTRESGIVIAKDPTLPDVP-------SGWSAVFDTTHQAYYYHNLTTDETSWVLP------ATVAESHPADSKSVKSSPERDERPREIKKSKADEGDASTGRGE--RRSESSN----LSRRRGSPGDEGGREHAEA 843          
BLAST of mRNA_H-elongata_contig13878.2702.1 vs. uniprot
Match: A0A7S3USF4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3USF4_HETAK)

HSP 1 Score: 74.3 bits (181), Expect = 4.520e-12
Identity = 40/98 (40.82%), Postives = 54/98 (55.10%), Query Frame = 0
Query: 1058 GDVWNGESLSGLLVGYGPRRYRNLGGGYYMITLELGTEWAAAAIAALGQGADDPVSAARVDWVCCIASAPGYGLFLRWAGDDDEKKLFDVPDELFDDP 1155
            GD+W G  ++GL  G GPR +R LG GYY++T        AA + A  +G    V A R DW  C        +F+RW G+ D  ++FD+P E FDDP
Sbjct:    1 GDLWRGHQVAGLFPGCGPRAFRALGQGYYLVTFAAPERAGAAVVLAAEEGPRALVQA-RSDWAKCKRD-----VFIRWVGEQDPDEVFDLPKEDFDDP 92          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13878.2702.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G8X5_ECTSI3.850e-8434.45Similar to Fe65 n=1 Tax=Ectocarpus siliculosus Tax... [more]
A0A6H5JJN1_9PHAE8.550e-4433.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3USF4_HETAK4.520e-1240.82Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1267..1287
NoneNo IPR availableCOILSCoilCoilcoord: 1179..1199
NoneNo IPR availableGENE3D2.20.70.10coord: 731..772
e-value: 2.8E-6
score: 28.7
NoneNo IPR availableGENE3D2.20.70.10coord: 137..185
e-value: 1.4E-10
score: 42.5
NoneNo IPR availablePANTHERPTHR47852FAMILY NOT NAMEDcoord: 1173..1309
coord: 48..378
IPR001202WW domainSMARTSM00456ww_5coord: 733..766
e-value: 1.2E-5
score: 34.7
coord: 142..174
e-value: 2.1E-7
score: 40.6
IPR001202WW domainPFAMPF00397WWcoord: 143..172
e-value: 8.4E-8
score: 32.2
coord: 736..764
e-value: 5.9E-8
score: 32.7
IPR001202WW domainPROSITEPS01159WW_DOMAIN_1coord: 147..172
IPR001202WW domainPROSITEPS01159WW_DOMAIN_1coord: 738..764
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 141..174
score: 13.91
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 736..766
score: 10.719
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 735..765
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 136..172

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13878contigH-elongata_contig13878:1053..6712 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13878.2702.1mRNA_H-elongata_contig13878.2702.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig13878 992..6712 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig13878.2702.1 ID=prot_H-elongata_contig13878.2702.1|Name=mRNA_H-elongata_contig13878.2702.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=1313bp
MGRRPVGIKRKEEIEVFGVDKAPENAANGMSPSASTADCRDQVTPPEGDS
AETTAVEEEADINRENKGEATQQSGSNPLMGLVYYGSDSDEEGSSARDGS
SPTGSKENTDRGATADAPSNAAASESPVAMAAANTTEDTELNLPNGWQQC
MDNSGAIYFWNPGSGETTWEMPAGTVYRKGSSTPASSALSSNSDVAINST
PREAVSGANDGDRVASDGTSDTASESGEGEEENGEMKRSTGSASATLVSS
TTTEDATGALAGDIEHPPGPEEVSDSVESDPLRKSRSQSDVDDNPRADVD
TSVIDDSIQAAAGLSGVDDLLADIEAEMLSGIGGGAGRGADDADKAAHPA
KDTKPAQEDFSPLREIASGLDVRAQRSHAELIELFTAAEEEDATEVGRKA
DGTRVKRRLRVELGAVLQARISDWREGGLDGAFLVRKLEEMAVQARSSLL
DDRVTASSSQADEMLSLANSSSDEKFIATAAAAVASSNPPGEIDPPSDAV
DGLSRDQEKVSPSKPSLKNKKERDKPKKGRWRGGGEENGGKEAFGSNDRG
NEGHEDSGRALHDAASENSSRTAAEALREAETAEKLRWADKVSAAATAAV
AAAAKAKKEAVAREKAMTDRRPSSSPRQQGEGENDLDEILPSAEDEPREE
GEIVLIPKASVTSASTEGEVSIVSNEVDAEEDGEGDNETIKVQPMEAQPA
KCGKASEKYTTHRHSGFHAPDPSRVTMSGSSAFSFSGWAAIWDNDHSAYY
YHNLATDETTWVLPRAQETKATPAEKEPPAPSSSSSSPSSVKTSLTPAGR
DALKIGDEKRQVEEKNPRKPLKRWQKSTGKQAGREQAEALPPMPRRGDGK
TATLEPEGSAAEEGASAASTTPVKAMASGTDKSSVREEKAAKAVAPATSK
SSIREKKATNPEPGARHEAGELPRYGLGNPFAAAPASSGVWSEIPSVIPS
ESRVYSGTNLVYMVLDEEQASLSFSLSLLRSPRLLDRGRFFESFASTNKT
SWVRPSAPSPVDKAKEEFQGNKVEEASPTLTSCDPAPPLPSATVDMRPST
LVWWSDAGDVWNGESLSGLLVGYGPRRYRNLGGGYYMITLELGTEWAAAA
IAALGQGADDPVSAARVDWVCCIASAPGYGLFLRWAGDDDEKKLFDVPDE
LFDDPQPDPAVAVTDEAAPRAAAVAEVEVVAHAAALAEVEAAKEDAEANE
VAAAAVAATEAAEAAGSEAAAKAVAKAAPFASTSKKRRNNKSSGMGATSG
SISKKRKGAASLIDKWKAVASNAGEEAEREAEKMEKMERWKARAAALDPD
NPNFIPLGRKRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001202WW_dom
IPR036020WW_dom_sf