prot_H-elongata_contig138550.2692.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig138550.2692.1
Unique Nameprot_H-elongata_contig138550.2692.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length207
Homology
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BLAST of mRNA_H-elongata_contig138550.2692.1 vs. uniprot
Match: D8LG77_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG77_ECTSI)

HSP 1 Score: 322 bits (825), Expect = 2.310e-98
Identity = 174/218 (79.82%), Postives = 188/218 (86.24%), Query Frame = 0 
Query:    1 CPFHVLHHCRARAKAKKAS---YFTPK----SVGSVSGASGSA---DDEYYSNYNPIRTG-MLMPHGKAIAPQSIKAISPTPSQTKASLLLFTDLTQATPPRDDPIYTEMIGTLGLFGTFYMSKEDMDFCAMRLYSNFKQAQENMERHAILDSIDVMPEIYDILRHCEDSHLTADEKSLLATQLAPHWTNSEEARSALETAVVYTEAEEEAEFWQGLQ 207
            C + +L  CR R +AK+AS   +F+ K    + GSVSGASG+    + EYY N+NPIRTG ML PHGKAIAP SIKA+SPTPSQTK + L FT+L +ATPPR DPIYTEMIGTLGLFGTFYMSKEDMDFCAMRLYSNFKQAQENMERHAILDSIDVMPEIYDILRHCEDSHLTADEKSLLATQLAPHWTNSEEAR ALETAVVYTEAEEEAEFWQGLQ
Sbjct: 1063 CLWAILGFCRQRMRAKEASRKDFFSSKMMGSAAGSVSGASGTGSGDEGEYYHNFNPIRTGGMLAPHGKAIAPASIKAVSPTPSQTKQTEL-FTNLMEATPPRGDPIYTEMIGTLGLFGTFYMSKEDMDFCAMRLYSNFKQAQENMERHAILDSIDVMPEIYDILRHCEDSHLTADEKSLLATQLAPHWTNSEEARRALETAVVYTEAEEEAEFWQGLQ 1279
[Close]
BLAST of mRNA_H-elongata_contig138550.2692.1 vs. uniprot
Match: A0A6H5KYK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYK9_9PHAE)

HSP 1 Score: 322 bits (825), Expect = 3.040e-98
Identity = 174/218 (79.82%), Postives = 188/218 (86.24%), Query Frame = 0 
Query:    1 CPFHVLHHCRARAKAKKAS---YFTPK----SVGSVSGASGSA---DDEYYSNYNPIRTG-MLMPHGKAIAPQSIKAISPTPSQTKASLLLFTDLTQATPPRDDPIYTEMIGTLGLFGTFYMSKEDMDFCAMRLYSNFKQAQENMERHAILDSIDVMPEIYDILRHCEDSHLTADEKSLLATQLAPHWTNSEEARSALETAVVYTEAEEEAEFWQGLQ 207
            C + +L  CR R +AK+AS   +F+ K    + GSVSGASG+    + EYY N+NPIRTG ML PHGKAIAP SIKA+SPTPSQTK + L FT+L +ATPPR DPIYTEMIGTLGLFGTFYMSKEDMDFCAMRLYSNFKQAQENMERHAILDSIDVMPEIYDILRHCEDSHLTADEKSLLATQLAPHWTNSEEAR ALETAVVYTEAEEEAEFWQGLQ
Sbjct: 1559 CLWAILGFCRQRRRAKEASRQDFFSSKLMGSTAGSVSGASGTGSGDEGEYYHNFNPIRTGGMLAPHGKAIAPASIKAVSPTPSQTKQTEL-FTNLMEATPPRGDPIYTEMIGTLGLFGTFYMSKEDMDFCAMRLYSNFKQAQENMERHAILDSIDVMPEIYDILRHCEDSHLTADEKSLLATQLAPHWTNSEEARRALETAVVYTEAEEEAEFWQGLQ 1775
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig138550.2692.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LG77_ECTSI2.310e-9879.82Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KYK9_9PHAE3.040e-9879.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig138550contigH-elongata_contig138550:122..1133 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig138550.2692.1mRNA_H-elongata_contig138550.2692.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig138550 122..1133 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig138550.2692.1 ID=prot_H-elongata_contig138550.2692.1|Name=mRNA_H-elongata_contig138550.2692.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=207bp
CPFHVLHHCRARAKAKKASYFTPKSVGSVSGASGSADDEYYSNYNPIRTG
MLMPHGKAIAPQSIKAISPTPSQTKASLLLFTDLTQATPPRDDPIYTEMI
GTLGLFGTFYMSKEDMDFCAMRLYSNFKQAQENMERHAILDSIDVMPEIY
DILRHCEDSHLTADEKSLLATQLAPHWTNSEEARSALETAVVYTEAEEEA
EFWQGLQ
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