prot_H-elongata_contig138049.2667.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig138049.2667.1
Unique Nameprot_H-elongata_contig138049.2667.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length63
Homology
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BLAST of mRNA_H-elongata_contig138049.2667.1 vs. uniprot
Match: A0A6H5J7Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7Y8_9PHAE)

HSP 1 Score: 67.4 bits (163), Expect = 1.380e-11
Identity = 34/102 (33.33%), Postives = 46/102 (45.10%), Query Frame = 0 
Query:    1 RVNEFPLGCIAPITIMWSPPDPVKESE---------------------------------------AVPSVKEEDCDEFRRAWLWVHPSAAKEALQQIKKAC 63
            R NEFPLGC+AP+T++W+P D    +                                          P   EE  ++ RR W WVHP+AAKEAL++I+KAC
Sbjct:  139 RANEFPLGCVAPVTVLWAPSDSAASANNEDARKNDHDADGNNGTSAPEXXXXXXXXXXXXXXXXXGGAPDGLEEQEEDVRRVWAWVHPAAAKEALREIRKAC 240
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig138049.2667.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5J7Y8_9PHAE1.380e-1133.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039182Ribonucleases P/MRP protein subunit Pop1PANTHERPTHR22731RIBONUCLEASES P/MRP PROTEIN SUBUNIT POP1coord: 2..63

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig138049contigH-elongata_contig138049:837..1025 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig138049.2667.1mRNA_H-elongata_contig138049.2667.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig138049 837..1025 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig138049.2667.1 ID=prot_H-elongata_contig138049.2667.1|Name=mRNA_H-elongata_contig138049.2667.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=63bp
RVNEFPLGCIAPITIMWSPPDPVKESEAVPSVKEEDCDEFRRAWLWVHPS
AAKEALQQIKKAC
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039182Pop1