prot_H-elongata_contig137811.2656.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig137811.2656.1
Unique Nameprot_H-elongata_contig137811.2656.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length453
Homology
BLAST of mRNA_H-elongata_contig137811.2656.1 vs. uniprot
Match: D8LRA8_ECTSI (tRNA pseudouridine(55) synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRA8_ECTSI)

HSP 1 Score: 423 bits (1087), Expect = 4.130e-140
Identity = 259/478 (54.18%), Postives = 307/478 (64.23%), Query Frame = 0
Query:    1 AGTATSPTVISVKEALKLGLAEGLHSRLGD-------------SGVVID-PDSDFVVEVTAKAPEADAHAKALLLGESFQPPSGRKKQP-GWP-GSGRWSKKRQRREEHRNQGLTVGAVKKGLLDLDGEGRARMRRWVKSL-EAGRQGGNEKPQALKNHGDTEGNVRRLERESDEVEGVSCMNENMDVDTTDVENGLEDKNESGKSKNHLMKEESISGSVS---------VEYTAQSSIV------PASNTNDLNSGSDVRVPFQAYCDIAIRRLPIHFWGRYTKLSRVVPQTPWVKGFFSVQEAVSEPFEEFSGSIEALLHGSGREDVDVRMLGNGRPFSLELVDSLRSVDEITVALPALQKAVNSGVGQRNAGGGVAVSELRVAGPGDLPSDVQRVGEGKRKHYRCVVWVSRAVGDKELKRTLCNRP--ELVVQQATPVRVLHRRTLMDRPRSIFDMRVDWLNDHFFVLNLTTSAG 444
            AG  +   V+ VKEALK+GLA  L + L               + V +D  DSDF+VEVTA+APEADAHA   LLG      SG  K P GWP G GRW+KKRQRRE+ RN GLTVGAVKKGL ++D  GR RMRRWV+ L E  R GG  +       G  E  V  +   +              V   D     E K+ +G++ + +     +SG+V+             A++ +V      P S T    S        +A C++AIRR PIHFWGRYTKLSR VPQTPW KGF+SVQEAVSEPF+ FSG +E LLHG+GREDVDVRMLG GRPF LELVDSLRSVDEI   LP+L  AVN+  G +NAGGGVAVS L+V+GPG+LPSDVQ VGEGKRKHYRCVVWVSR VG +EL + LC     ELVVQQATP+RVLHRRTL+DRPRSIF MR +W+N+HFF L L TSAG
Sbjct:   77 AGQISRQAVVPVKEALKIGLAHVLKAHLQTRQEEAAAVAAVTAAVVTVDHQDSDFMVEVTARAPEADAHAATALLGGPAPSRSGAGKPPRGWPAGGGRWAKKRQRREQQRNPGLTVGAVKKGLNEMDDAGRERMRRWVQGLIEERRTGGGIE------EGIEEEPVASIGGATRAXXXXXXXXXXXVVGGGDGVVDAEPKDSTGQAVDGVTP---VSGTVAGGDAREGSPAAIPAEAPVVRAAGPPPPSATPSDASTHPTSAGAEALCEVAIRRKPIHFWGRYTKLSRSVPQTPWFKGFYSVQEAVSEPFQAFSGCVEGLLHGAGREDVDVRMLGKGRPFCLELVDSLRSVDEIAARLPSLADAVNTAGGVKNAGGGVAVSRLQVSGPGELPSDVQAVGEGKRKHYRCVVWVSRPVGKEELVKALCEDAPEELVVQQATPIRVLHRRTLLDRPRSIFGMRAEWINEHFFQLELATSAG 545          
BLAST of mRNA_H-elongata_contig137811.2656.1 vs. uniprot
Match: A0A6H5KZN5_9PHAE (tRNA pseudouridine(55) synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZN5_9PHAE)

HSP 1 Score: 422 bits (1086), Expect = 2.240e-137
Identity = 258/467 (55.25%), Postives = 304/467 (65.10%), Query Frame = 0
Query:    1 AGTATSPTVISVKEALKLGLAEGLHSRL-------------GDSGVVID-PDSDFVVEVTAKAPEADAHAKALLLGESFQPPSGRKKQP-GWP-GSGRWSKKRQRREEHRNQGLTVGAVKKGLLDLDGEGRARMRRWVKSL-EAGRQGGNEKPQALKNHGDTEGNVRRLE--RESDEVEGVSCMNENMDVDTT-DVENGLEDKNESGKSKNHLMKEESISGS-VSVEYTAQSSIVPASNTNDLNSGSDVRVPFQAYCDIAIRRLPIHFWGRYTKLSRVVPQTPWVKGFFSVQEAVSEPFEEFSGSIEALLHGSGREDVDVRMLGNGRPFSLELVDSLRSVDEITVALPALQKAVNSGVGQRNAGGGVAVSELRVAGPGDLPSDVQRVGEGKRKHYRCVVWVSRAVGDKELKRTLCNRP--ELVVQQATPVRVLHRRTLMDRPRSIFDMRVDWLNDHFFVLNLTTSAG 444
            AG  +   V+ VKEALK+GLA  L + L               + V +D  DSDF+VEVTA+APEADAHA   LLG      SG  K P GWP G GRW+KKRQRREE RN GLTVGAVKKGL ++D  GR RMRRWV+ L +  R GG  +   + + G   G        R ++ V G   + +    D+T    +G+     SG       +E S + +         + + P S T    S        +A C++AIRR  IHFWGRYTKLSR VPQTPW KGF+SVQEAVSEPF+ FSG +E LLHG+GREDVDVRMLG GRPF LELVDSLRSVDEI   LP+L  AVN+  G +N GGGVAVS LRVAGPG+LPSDVQ VGEGKRKHYRCVVWVSR VG +EL + LC     ELVVQQATP+RVLHRRTL+DRPRSIF MR +W+N+HFF L L TSAG
Sbjct:  287 AGQISRQAVVPVKEALKIGLARTLRAHLQTRQEAAAAVXXXXXAVVTVDHQDSDFMVEVTARAPEADAHAATALLGGPAPSHSGAGKPPRGWPAGGGRWAKKRQRREEQRNPGLTVGAVKKGLNEMDDAGRERMRRWVQGLIQERRTGGEIEEVPVASLGGITGAADSSSGGRAAEVVRGGDGVVDAEPKDSTGQAVDGVTPV--SGTVVGGDAREGSPAAAPAEAPVVRAAGVPPPSATPSDASIHPTSGGAEALCEVAIRRKSIHFWGRYTKLSRSVPQTPWFKGFYSVQEAVSEPFQAFSGCVEGLLHGAGREDVDVRMLGKGRPFCLELVDSLRSVDEIAARLPSLADAVNTAGGVKNVGGGVAVSRLRVAGPGELPSDVQAVGEGKRKHYRCVVWVSRPVGKEELVKALCEDAPEELVVQQATPIRVLHRRTLLDRPRSIFGMRAEWINEHFFQLELATSAG 751          
BLAST of mRNA_H-elongata_contig137811.2656.1 vs. uniprot
Match: A0A836CNG6_9STRA (tRNA pseudouridine(55) synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNG6_9STRA)

HSP 1 Score: 182 bits (463), Expect = 3.040e-47
Identity = 106/221 (47.96%), Postives = 137/221 (61.99%), Query Frame = 0
Query:  236 CDIAIRRLPIHFWGRYTKLSRVVPQTPWVKGF---------FSVQEAVSEPFEEFSGSIEALLHGSGREDVDVRMLGNGRPFSLELVDSLRSVDEITVALPALQKAVNSGVGQRNAGGGVAVSELRVAGPGDLPSDVQRVGEGKRKHYRCVVWVSRAVGDKELKRTLCNRP---ELVVQQATPVRVLHRRTLMDRPRSIFDMRVDWLNDHFFVLNLTTSAG 444
            C  A+ R P + +GRY KLSR VPQ+PW  G           SVQE V+ P E  +   E  L G+GRED+DVRMLGNGRPF LE++DS  +  ++  ALP LQ+ VN+  G  N+ G V VS+ ++ G  D+ S +Q   EGKRKHYRCVVW SR V   EL   L   P   +L V+Q+TPVRVLHRR  + R +++  +R   +   FFVL+LTTSAG
Sbjct:  417 CAAALERQPQYVFGRYRKLSRSVPQSPWTVGRGADAVRIGDASVQEIVAAPLEALARCREVKLAGAGREDMDVRMLGNGRPFVLEVIDSKVTAQQLADALPRLQREVNACTGL-NSEGAVEVSDFKLVGR-DIYSQIQEGAEGKRKHYRCVVWTSRDVSQAELDAALHAHPPGADLEVRQSTPVRVLHRRAALTRVKTVRALRAARVAPRFFVLSLTTSAG 635          
BLAST of mRNA_H-elongata_contig137811.2656.1 vs. uniprot
Match: A0A8J5Y2V0_DIALT (tRNA pseudouridine(55) synthase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5Y2V0_DIALT)

HSP 1 Score: 152 bits (384), Expect = 2.300e-37
Identity = 90/219 (41.10%), Postives = 127/219 (57.99%), Query Frame = 0
Query:  236 CDIAIR--RLPIHFWGRYTKLSRVVPQTPW-----VKGFFSVQEAVSEPFEEFSGSIEALLHGSGREDVDVRMLGNGRPFSLELVDS--LRSVDEITVALPALQKAVNSGVGQRNAGGGVAVSELRVAGPGDLPSDVQRVGEGK-RKHYRCVVWVSRAVGDKELKRTLCNRPELVVQQATPVRVLHRRTLMDRPRSIFDMRVDWLNDHFFVLNLTTSAG 444
            C  ++R    P+   GRY K SR +PQTPW      +G  SVQE +    +    +   + HG+GREDVDVRMLG+GRPF +E+ +   L     +   L  L+ A+N       A   V VS+LRV  P     D+ R GE + RK YRCVVW+SR V  +E+   L    E++++Q TP+RVLHRR L+ RPR+++ MR + LN H+ +L+L T +G
Sbjct:  241 CSASLRASHAPVCIGGRYNKYSREMPQTPWWLDNEKRGISSVQEELQTVLQPAYAASATVFHGAGREDVDVRMLGSGRPFVIEMQEPACLEPGTAVGTPLAELEAAINL------ASEHVQVSQLRVV-PSSSIGDLVREGESEHRKAYRCVVWLSRRVSAREVADKLDGAGEVLLEQRTPIRVLHRRPLLTRPRTVYSMRSELLNGHYLMLDLVTQSG 452          
BLAST of mRNA_H-elongata_contig137811.2656.1 vs. uniprot
Match: A0A5A8CYU0_CAFRO (tRNA pseudouridine(55) synthase n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CYU0_CAFRO)

HSP 1 Score: 145 bits (365), Expect = 8.720e-36
Identity = 93/213 (43.66%), Postives = 125/213 (58.69%), Query Frame = 0
Query:  238 IAIRRLPIHFWGRYTKLSRVVPQTPW----VKGFF-SVQEAVSEPFEEFSGSIEALLHGSGREDVDVRMLGNGRPFSLELVDS-LRSVDEITVALPALQKAVNSGVGQRNAGGGVAVSELRVAGPGDLPSDVQRVGEGKRKHYRCVVWVSRAVGDKELKRTLCNRPELVVQQATPVRVLHRRTLMDRPRSIFDMRVDWLNDHFFVLNLTTSAG 444
            +A+RR  +   GRY+K +R V QT W     +G + SV+E  ++      G+ ++ LHGSGREDVDVRMLG GRPF LEL    + SV +  +   A++  +N       +  GV V+ELR+A   D+ +     G+ KRK Y  +V    AV  + L+  L    EL V Q TPVRVLHRR+LMDRP+ I  MR  W+N H+FVL L TSAG
Sbjct:   67 VAVRRESLFVRGRYSKTARGVSQTAWRLEGQEGLYRSVEEVAADHLAPLFGAADSRLHGSGREDVDVRMLGGGRPFVLELKQPRISSVSQAAIDQAAMR--IN------RSPEGVTVTELRLATTSDVDAVTAGAGD-KRKEYAALVRCRAAVTPEFLRERLDAVKELAVCQTTPVRVLHRRSLMDRPKVIHGMRTRWVNAHWFVLRLVTSAG 270          
BLAST of mRNA_H-elongata_contig137811.2656.1 vs. uniprot
Match: A0A0D2WJ29_CAPO3 (tRNA pseudouridine(55) synthase n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WJ29_CAPO3)

HSP 1 Score: 147 bits (370), Expect = 9.830e-35
Identity = 91/209 (43.54%), Postives = 125/209 (59.81%), Query Frame = 0
Query:  242 RLPIHFWGRYTKLSRVVPQTPWV-----KGFFSVQEAVSEPFEEFSGSIEALLHGSGREDVDVRMLGNGRPFSLELVDSLRSVDEITV-ALPALQKAVNSGVGQRNAGGGVAVSELRVAGPGDLPSDVQRVGEGKRKHYRCVVWVSRAVGDKELKRTLCNRPELVVQQATPVRVLHRRTLMDRPRSIFDMRVDWLNDHFFVLNLTTSAG 444
            R PI   GRY K SRVV Q+P++     KG  SV E ++ P   + G+ E  L  SGRED+DVRMLG GRPF LE+ D+ RS   +T   L  LQ  VN       AGG V + +L VA   D+P+ +    + K+K Y  V+WVSR +  +++   L    E+VVQQ TP+RV+HRR +  RPRS++ MR   +N+H+ +L L+T AG
Sbjct:  392 RDPIFIGGRYNKYSRVVSQSPYIVGEERKGDTSVHELIAAPMLAYCGASEIKLSSSGREDMDVRMLGRGRPFVLEIADARRS--SLTPDKLAHLQALVNDA-----AGGRVHIRDLIVAQRADIPA-LNEGEDDKKKLYGAVIWVSRPITAEDIA-ALTRPEEMVVQQMTPLRVMHRRAICTRPRSVYWMRAHQINEHYLLLCLSTQAG 591          
BLAST of mRNA_H-elongata_contig137811.2656.1 vs. uniprot
Match: A0A7S2WQC3_9STRA (tRNA pseudouridine(55) synthase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WQC3_9STRA)

HSP 1 Score: 138 bits (348), Expect = 9.750e-34
Identity = 81/215 (37.67%), Postives = 123/215 (57.21%), Query Frame = 0
Query:  237 DIAIR--RLPIHFWGRYTKLSRVVPQTPWV-----KGFFSVQEAVSEPFEEFSGSIEALLHGSGREDVDVRMLGNGRPFSLELVDSLRSVDEITVALPALQKAVNSGVGQRNAGGGVAVSELRVAGPGDLPSDVQRVGEGKRKHYRCVVWVSRAVGDKELKRTLCNRPELVVQQATPVRVLHRRTLMDRPRSIFDMRVDWLNDHFFVLNLTTSAG 444
            D+AI+  R P+   GRY KL+R VPQ+PW      KG  SV+E +    +   G+ E     +GRED+DVRMLG+GRPF +E++   R       A+  + +++NS +   N    V V  L+   P  +  ++      K+K YRC+VWVS+ V  ++L+  L +  +L V Q TP+RV+HRR+ M R + I  +R  W+N H+F L++  SAG
Sbjct:   58 DMAIKWVRQPLFLGGRYRKLARDVPQSPWFIDGQRKGRGSVEECLGHAIQAAFGADEVKFQAAGREDIDVRMLGHGRPFLVEVLQPRRLT--ALSAVDQIMRSINSDMTGPNKDQDVEVEALQWV-PRSVEKEMHDGAADKKKGYRCMVWVSKPVTPQDLEARLDSVADLKVAQDTPIRVVHRRSPMIRDKMIHSLRTSWINSHWFQLDVVASAG 269          
BLAST of mRNA_H-elongata_contig137811.2656.1 vs. uniprot
Match: A0A7S1A4R1_NOCSC (tRNA pseudouridine(55) synthase n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1A4R1_NOCSC)

HSP 1 Score: 141 bits (356), Expect = 1.290e-33
Identity = 85/217 (39.17%), Postives = 122/217 (56.22%), Query Frame = 0
Query:  233 QAYCDIAIRRLPIHFWGRYTKLSRVVPQTPWV-----KGFFSVQEAVSEPFEEFSGSIEALLHGSGREDVDVRMLGNGRPFSLELVDSLRSVDEITVALPALQKAVNSGVGQRNAGGGVAVSELRVAGPGDLPSDVQRVGEGKRKHYRCVVWVSRAVGDKELKRTLCNRPELVVQQATPVRVLHRRTLMDRPRSIFDMRVDWLNDHFFVLNLTTSAG 444
            Q+   +A+ R  I+  GRY KL R +PQ  WV     +G  SV+E V+EP  +  G+    +H  GRED+DVRMLG GR F +E+ D+ R+    T++   ++ AVN   G       + +S L    P  + S +Q   E  RK Y CV W  RA+ + +L  TL N  ++ V Q TP+RVLHRRT   RPR++  M+   +NDH+F L ++T AG
Sbjct:  224 QSKVAVALGRSAIYLVGRYLKLQRGIPQAKWVVDDERRGDTSVEELVTEPIAKQFGASSCGMHAEGREDIDVRMLGQGRTFVVEVRDAERT----TLSCAGVESAVNVACGDA-----LKISGLERCDPSRM-SSLQAHAEAHRKTYVCVCWSQRALAEADLV-TLSNMTDIEVAQQTPLRVLHRRTQATRPRTVHWMKATRINDHYFTLRVSTQAG 429          
BLAST of mRNA_H-elongata_contig137811.2656.1 vs. uniprot
Match: A0A8K1C5Y9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C5Y9_PYTOL)

HSP 1 Score: 139 bits (351), Expect = 1.140e-32
Identity = 95/225 (42.22%), Postives = 127/225 (56.44%), Query Frame = 0
Query:  233 QAYCDIAIRRLPIHFWGRYTKLSRVVPQTPWV-----KGFFSVQEAVSE---PFEEFSGSIEALLHGSGREDVDVRMLGNGRPFSLELVDSLRSVDEITVA-LPALQKAVNSGVGQRNAGGGVAVSELRVAGPGDLPSDVQRVGEGKRKHYRCVVWVSRAVGDKELKRTLCNR----PELVVQQATPVRVLHRRTLMDRPRSIFDMRVDWLNDHFFVLNLTTSAG 444
            Q  C + + R P++  GRY K  R + QTPWV      G  SV+E + E   PF + SG      H +GREDVDVRMLGNGRPF LE++D+ +S  ++T A    LQ AVN+        G V + E++ A   +    +Q   + KRK Y CVVW      +KEL   L  +     +L +QQ TP+RVLHRRTLM RP+ I   + + LN H+ +L LTTSAG
Sbjct:  264 QPTCGVVLERDPVYIQGRYLKYKRGLSQTPWVLDGVRMGDSSVEECIGEVGLPFFKGSGY---KFHTAGREDVDVRMLGNGRPFILEILDAKKS--KLTPAEYEQLQAAVNT-----THQGAVEIREVK-ASTKEYFGKLQAGADSKRKTYCCVVW-----SEKELTPDLVAKLDAIHDLTIQQQTPIRVLHRRTLMTRPKVIHATKCEVLNKHYMLLRLTTSAG 472          
BLAST of mRNA_H-elongata_contig137811.2656.1 vs. uniprot
Match: A0A067D9A4_SAPPC (tRNA pseudouridine(55) synthase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D9A4_SAPPC)

HSP 1 Score: 139 bits (349), Expect = 1.710e-32
Identity = 91/223 (40.81%), Postives = 120/223 (53.81%), Query Frame = 0
Query:  229 RVPFQAYCDIAIRRLPIHFWGRYTKLSRVVPQTPWV-----KGFFSVQEAVSEPFEEFSGSIEALLHGSGREDVDVRMLGNGRPFSLELVDSLRSV--DEITVALPALQKAVNSGVGQRNAGGGVAVSELRVAGPGDLPSDVQRVGEGKRKHYRCVVWVSRAVGDKELKRTLCNRPELVVQQATPVRVLHRRTLMDRPRSIFDMRVDWLNDHFFVLNLTTSAG 444
            R    A   +++ R P++  GRY K  R + QTPWV      G  SV+EA+ +      G+     H +GREDVDVRMLGNGRPF LEL+D+  +    ++   + A   A N+ +        V + EL  A      + +Q   + KRK Y CVVW S  V   E    L    +L V Q TPVRVLHRRTL+ RP+ I D  V+ LNDH+ +L LTTSAG
Sbjct:  230 RAQSAASISVSVERAPVYVAGRYLKFMRGLSQTPWVLDGERMGDSSVEEAIGDIISPVFGAKSYKFHTAGREDVDVRMLGNGRPFILELLDAKVATLPADMYATVQAQVNAANTDI--------VEIRELSSATKEGFAA-LQSGADSKRKTYCCVVWTS-GVLTPERVAILNGICDLRVGQKTPVRVLHRRTLLTRPKVIHDASVELLNDHYMLLRLTTSAG 442          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig137811.2656.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRA8_ECTSI4.130e-14054.18tRNA pseudouridine(55) synthase n=1 Tax=Ectocarpus... [more]
A0A6H5KZN5_9PHAE2.240e-13755.25tRNA pseudouridine(55) synthase n=1 Tax=Ectocarpus... [more]
A0A836CNG6_9STRA3.040e-4747.96tRNA pseudouridine(55) synthase n=1 Tax=Tribonema ... [more]
A0A8J5Y2V0_DIALT2.300e-3741.10tRNA pseudouridine(55) synthase n=1 Tax=Diacronema... [more]
A0A5A8CYU0_CAFRO8.720e-3643.66tRNA pseudouridine(55) synthase n=3 Tax=Cafeteria ... [more]
A0A0D2WJ29_CAPO39.830e-3543.54tRNA pseudouridine(55) synthase n=2 Tax=Capsaspora... [more]
A0A7S2WQC3_9STRA9.750e-3437.67tRNA pseudouridine(55) synthase n=1 Tax=Rhizochrom... [more]
A0A7S1A4R1_NOCSC1.290e-3339.17tRNA pseudouridine(55) synthase n=1 Tax=Noctiluca ... [more]
A0A8K1C5Y9_PYTOL1.140e-3242.22Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A067D9A4_SAPPC1.710e-3240.81tRNA pseudouridine(55) synthase n=2 Tax=Saprolegni... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.2510coord: 245..369
e-value: 3.1E-23
score: 84.2
NoneNo IPR availableGENE3D3.30.70.3190coord: 372..446
e-value: 1.6E-16
score: 61.8
IPR039894tRNA pseudouridine synthase Pus10-likePANTHERPTHR21568UNCHARACTERIZEDcoord: 7..444
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 368..444

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig137811contigH-elongata_contig137811:23..1381 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig137811.2656.1mRNA_H-elongata_contig137811.2656.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig137811 23..1381 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig137811.2656.1 ID=prot_H-elongata_contig137811.2656.1|Name=mRNA_H-elongata_contig137811.2656.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=453bp
AGTATSPTVISVKEALKLGLAEGLHSRLGDSGVVIDPDSDFVVEVTAKAP
EADAHAKALLLGESFQPPSGRKKQPGWPGSGRWSKKRQRREEHRNQGLTV
GAVKKGLLDLDGEGRARMRRWVKSLEAGRQGGNEKPQALKNHGDTEGNVR
RLERESDEVEGVSCMNENMDVDTTDVENGLEDKNESGKSKNHLMKEESIS
GSVSVEYTAQSSIVPASNTNDLNSGSDVRVPFQAYCDIAIRRLPIHFWGR
YTKLSRVVPQTPWVKGFFSVQEAVSEPFEEFSGSIEALLHGSGREDVDVR
MLGNGRPFSLELVDSLRSVDEITVALPALQKAVNSGVGQRNAGGGVAVSE
LRVAGPGDLPSDVQRVGEGKRKHYRCVVWVSRAVGDKELKRTLCNRPELV
VQQATPVRVLHRRTLMDRPRSIFDMRVDWLNDHFFVLNLTTSAGESGINL
IV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039894Pus10-like
IPR020103PsdUridine_synth_cat_dom_sf