prot_H-elongata_contig13768.2647.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig13768.2647.1
Unique Nameprot_H-elongata_contig13768.2647.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length345
Homology
BLAST of mRNA_H-elongata_contig13768.2647.1 vs. uniprot
Match: A0A6H5KVC1_9PHAE (EngB-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KVC1_9PHAE)

HSP 1 Score: 468 bits (1204), Expect = 5.630e-163
Identity = 243/338 (71.89%), Postives = 281/338 (83.14%), Query Frame = 0
Query:    9 SGVVRCR-HLLACPSAAAPRLACPRYRYPGQLFVALSGASLYNVRSFSGEASGGEISKRKQFKQITVDPKIIRHLDALGLGMEKKKVERGRKIRLYERGVVSSAAPGPTSSTSIPKTFDHPTWAVKKLLSVTRLDQIPPFEDRLPEVAIVGRSNVGKSTLLNALLGMKKHPLERASVSETPGETRSLDFFRLGRGKRAKLILADMPGYGFAYAQKAQRDDWKGLMMAYLRGRGIPLKRIMLLLDARHGFKKLDIEFLELLYDPKGLSPLGKYRPPKIQVLLTKCDLVKRIDLARRVSLVRQQLDEVSRRQTNLPTMMLSALKGRGLTELQRELAALDP 345
            SG  RCR   ++ P     RL+C   R P   ++  SG++   VR FS E +G EISKR+QFKQI VD K++RHLDALGLGMEKKK+ERGRK+RLY RG VSSA PG T + + P+TFDHPTWAVK+L  V++L++IPP    LPEVA+VGRSNVGKSTLLNAL+G+KKHP +RASVSETPGETR+LDFF++G+GKRAK+I+ADMPGYGFAYA + QR DWKGLMMAYLRGRG PLKR+MLLLDARHGFKK DIEFL LLYDPKG SPLGKYRPPKIQ+LLTKCDLVKRIDLARRV  VRQQL+EVSRRQTNL  M LSALKG G+ ELQ+ELA+LDP
Sbjct:    4 SGFGRCRPRQVSAPGGL--RLSC---RQPLGAWMGRSGSTA--VRVFSTEPAGPEISKRQQFKQIAVDAKVMRHLDALGLGMEKKKIERGRKLRLYRRGAVSSAVPGATVTAAKPRTFDHPTWAVKQLSPVSKLEEIPPAAASLPEVALVGRSNVGKSTLLNALVGLKKHPNQRASVSETPGETRTLDFFQIGKGKRAKMIIADMPGYGFAYANEEQRQDWKGLMMAYLRGRGAPLKRVMLLLDARHGFKKADIEFLGLLYDPKGPSPLGKYRPPKIQILLTKCDLVKRIDLARRVVFVRQQLEEVSRRQTNLSVMTLSALKGAGMVELQKELASLDP 334          
BLAST of mRNA_H-elongata_contig13768.2647.1 vs. uniprot
Match: A0A835ZG72_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG72_9STRA)

HSP 1 Score: 287 bits (735), Expect = 1.580e-89
Identity = 156/305 (51.15%), Postives = 213/305 (69.84%), Query Frame = 0
Query:   49 YNVRSFSGEASGGE---ISKRKQFKQITVDPKIIRHLDALGLGMEKKKVERGRKIRLYERGVVSSAAPGPTSSTSIPKTFDHPTWAVKKLLSVTRLDQIPPFEDRLPEVAIVGRSNVGKSTLLNALLGMKKHPLERASVSETPGETRSLDFFRLGRGKRAKLILADMPGYGFAYAQKAQRDDWKGLMMAYLRGRGIPLKRIMLLLDARHGFKKLDIEFLELLY-----DPKGLSPLGKYRPPKIQVLLTKCDLVKRIDLARRVSLVRQQLDEVSRRQTNLPTMMLSALKGRGLTELQRELAALDP 345
            ++  + S +   GE   IS R  F+ + +D K++ +LD+  LG E  K    RK  L E+G+    +  P S+    KTFD PTWAVKK+ S   +++IPP  + LPEVA VGRSNVGKSTLLNALLG+K HPL RA+ S  PGETRS+DFFRLG+G +A+L+L D PG+GFA+A++ + + +   ++ YLRGRG  LKR+ +LLDARHGFK  D+ FL+ LY     D  G +PLG Y+PPK+QV+LTKCDLV+R +LARRVS VR +L +V+ R+T LP +M+SAL+ + + +LQ+ELA L P
Sbjct:   60 FDASAGSSDDPSGEPATISNRAAFRALPIDNKVLAYLDSRDLGRELPKRASKRKRVLIEKGLHDLHSVTPESAAL--KTFDVPTWAVKKVASAQSVEEIPPPSE-LPEVAFVGRSNVGKSTLLNALLGLKGHPLVRAATSMRPGETRSIDFFRLGKGSKAQLLLVDTPGFGFAFAKEEESERFIATLLQYLRGRGALLKRVCMLLDARHGFKANDVAFLQRLYARKGQDGLGRNPLGPYKPPKLQVILTKCDLVQRRELARRVSQVRARLSDVTPRETYLPVLMVSALRDQAVEDLQKELAGLVP 361          
BLAST of mRNA_H-elongata_contig13768.2647.1 vs. uniprot
Match: A0A7S2GV24_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GV24_9STRA)

HSP 1 Score: 177 bits (450), Expect = 1.290e-50
Identity = 97/197 (49.24%), Postives = 131/197 (66.50%), Query Frame = 0
Query:  153 EVAIVGRSNVGKSTLLNALLGMKKHPLERASVSETPGETRSLDFFRLGRGKRAKLILADMPGYGFAYAQKAQRDDWKGLMMAYLRGRGIPLKRIMLLLDARHGFKKLDIEFLELLYDPKGL--SPLGKY---RPPKIQVLLTKCDLVKRIDLARRVSLVRQQL-DEVSRRQTNLPTMMLSALKGRGLTELQRELAAL 343
            E+A+VGRSNVGKS+LLN +L +   P  +A     PG T+ L F+      R  L L D+PGY FAY  + + + W  LM+ YLR RG  LKR+ LLLDARHG K +D +FL LLY+P+ +   P G++    PPK+QV+LTKCDLV R DL RR+  VR+++ DE+  R   L  +M+SA +G+G+ ELQRELA+L
Sbjct:   40 EIALVGRSNVGKSSLLNTVLNISASPKNKAPTGTRPGVTQKLHFY--AAATRKPLTLVDVPGYSFAYEDQERIEAWNDLMLKYLRHRGPSLKRVCLLLDARHGLKVIDRQFLRLLYEPRPIVDPPPGEHVLWDPPKLQVILTKCDLVDRFDLVRRIQRVREEMSDELPSRAGRLQAIMVSAREGKGIMELQRELASL 234          
BLAST of mRNA_H-elongata_contig13768.2647.1 vs. uniprot
Match: B7FQ16_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FQ16_PHATC)

HSP 1 Score: 159 bits (402), Expect = 7.840e-42
Identity = 123/358 (34.36%), Postives = 175/358 (48.88%), Query Frame = 0
Query:   51 VRSFSGEASGGEISKRKQFKQITVDPKIIRHLDALGLGMEKKKVERGRKIRLYERGVVSSAAPGPTSSTSI------------PKTFDHPTWAVKKLLSVTRLDQ-IPPFEDRLPEVAIVGRSNVGKSTLLNALLGMKKHPLE--------------------RASVSETPGETRSLDFFRLG-RGKRAK-------LILADMPGYGFAYAQKAQRDDWKGLMMAYLRGRGIP-LKRIMLLLDARHGFKKLDIEFLELLYDPK----------GLSPLGKYRPPKIQVLLTKCDLVKRIDLARRVSLVRQQLDEVSRRQ-TNLPTMMLSALKG------------RGLTELQRELAAL 343
             R FS      ++S R+ FK++ V P I  ++  +G+G+  ++ ++  +    E G       G   +               P  F    + VK + +V  LD   P     +PE+ + GRSNVGKSTLLNALL   KH                       +A+ S+ PGETR++ F++L  R +R         L L D+PGYGFAYA++     ++ LM  YL  RG   LKR++LL+DARHG KK D++FL  L +            G        PP IQ++LTKCDLV R DLARRV+ VR QL +   R+ + LP M++SA  G             G+ ELQ+E+ AL
Sbjct:    8 TRIFSSSVIDAKVSNRRSFKELAVHPSIHNYIQLIGVGIPPRRSKKKSQRIAIEPGRFRDRRGGRAMNPEATEDQKRERHWKPPPPFGPKAFPVKVVGNVATLDDHYPANHKNIPEIVLAGRSNVGKSTLLNALLYGNKHADAVVRQRVRGKTPESVKQPKGMKATTSDKPGETRAITFYQLAARLERENGVFYDHALRLVDLPGYGFAYAKEEAARRYRALMADYLLKRGNKYLKRVLLLIDARHGMKKADVDFLMDLQEHSRHLQENSRLDGKRKKNAQLPP-IQLVLTKCDLVTRADLARRVAQVRSQLSDCFIREPSQLPVMLVSARAGVGYNNVVGDKARGGVLELQKEIVAL 364          
BLAST of mRNA_H-elongata_contig13768.2647.1 vs. uniprot
Match: A0A7S1VXG1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1VXG1_9STRA)

HSP 1 Score: 161 bits (408), Expect = 1.260e-41
Identity = 110/257 (42.80%), Postives = 142/257 (55.25%), Query Frame = 0
Query:  142 DQIPPFEDRLPEVAIVGRSNVGKSTLLNALL--GMKKHPLER------------------ASVSETPGETRSLDFFRLG----------RGKRAK----LILADMPGYGFAYAQKAQRDDWKGLMMAYLRGRGIPLKRIMLLLDARHGFKKLDIEFLELLYDP------KGLSPLGKYRPPKIQVLLTKCDLVKRIDLARRVSLVRQQL-DEVSRRQTNLPTMMLSALKGRG------------LTELQRELAALDP 345
            +++P     L EVA+ GRSNVGKSTLLNALL       P ER                  A +S+ PGETR +  ++L           +GK+ K    L+LAD+PGYGFA+A + +  +W  LM  YL  RG  LKR++LL+DARHG K  D EFL  L +       +G +P      P IQ++LTKCDLV + DLARRV  VRQQL D + R  ++LP M++SA  G G            + ELQRELAAL P
Sbjct:  263 EELPKSSKGLSEVALAGRSNVGKSTLLNALLYGNQLGKPQERQYRRGKTPENAKLPKGVKAVMSDKPGETRRITLYQLSSEIIKPPKDEQGKKHKEKMSLLLADLPGYGFAFASEEKYKEWHDLMRHYLLDRGKSLKRVLLLIDARHGMKNADFEFLSSLQESLKSTSKEGATPKNVRELPPIQIVLTKCDLVTQDDLARRVVQVRQQLSDNLLREPSSLPVMLVSAKAGLGYNNIRGGIARGGVLELQRELAALVP 519          
BLAST of mRNA_H-elongata_contig13768.2647.1 vs. uniprot
Match: A0A1Z5JKA0_FISSO (GTP-binding protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JKA0_FISSO)

HSP 1 Score: 156 bits (394), Expect = 2.170e-41
Identity = 106/290 (36.55%), Postives = 159/290 (54.83%), Query Frame = 0
Query:   50 NVRSFSGEASGGEISKRKQFKQITVDPKIIRHLDALGLGMEKKKVERGRKIRLYERGVVSSAAPGPTSSTSIPKTFD---HPTWAVKKLLSVTRLDQ---IPPFEDRLPEVAIVGRSNVGKSTLLNALLGMKKHPLE----------------------RASVSETPGETRSLDFFRLGRGKRA--KLILADMPGYGFAYAQKAQRDDWKGLMMAYLRGRGIPLKRIMLLLDARHGFKKLDIEFLELLYDP---KGLSPLGKYRPPKIQVLLTKCDLVKRIDLARRVSLV 306
            ++ SF+ + + G+ S+++QF+   VDP I++++ ++G+G+  ++ +  R     +     S A  PTS   +P  F     P   +  + +V  LD+    PP     PE+A++GRSNVGKSTLLN LL   ++                         +A  S  PGET+ + F+ L  G+ +  +L L D+PGYGFAYA +  +     L+ ++L+ R   LKRI+LL+DARHG KK DI+FL LL D    K  +   K   P IQV+LTKCDLV + DLARRV L+
Sbjct:   26 HLLSFTTDTAVGK-SQKQQFRDTPVDPSILKYITSVGVGIPPRRRKNRRNDNTPDE---VSNANNPTSW-KVPLPFGPNASPVRVIASVSAVNTLDENMGFPPVHKERPEIALIGRSNVGKSTLLNTLLYANRNENRQQEGGRAGRRSRIQTIELPRGIKAVTSNKPGETKHVTFYHLSSGEDSTCRLCLVDLPGYGFAYASEETKKTVDELIFSFLKQRQGHLKRILLLIDARHGMKKADIDFLTLLEDELVYKDSANNKKKTLPPIQVVLTKCDLVHQADLARRVRLM 310          
BLAST of mRNA_H-elongata_contig13768.2647.1 vs. uniprot
Match: A0A7S1ZZ98_TRICV (Hypothetical protein n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZZ98_TRICV)

HSP 1 Score: 159 bits (402), Expect = 6.190e-41
Identity = 112/265 (42.26%), Postives = 143/265 (53.96%), Query Frame = 0
Query:  142 DQIPPFEDRLPEVAIVGRSNVGKSTLLNALL-----------------------GMKKHPLERASVSETPGETRSLDFFRLG-----------RGKRAK--LILADMPGYGFAYAQKAQRDDWKGLMMAYLRGRGIPLKRIMLLLDARHGFKKLDIEFLELLYDP------KGLSPLGK------YRPPKIQVLLTKCDLVKRIDLARRVSLVRQQLDEVSRRQ-TNLPTMMLSALKG------------RGLTELQRELAALDP 345
            D +P     LPEVA+ GRSNVGKSTLLNALL                        MK    E+A VS+ PGET+ +  ++L            R  ++K  L+LAD+PGYGFAYA + +   W  LM  YL  RG  LKRI+LL+DARHGFK  D  FLE L +       KG     K      +  P IQ++LTKCDL K+ DLARRV  V++QL +  +RQ ++LP M++SA  G             G+ +LQRELAAL P
Sbjct:  229 DDMPRSSSGLPEVALAGRSNVGKSTLLNALLYGNQPSRDGHSVERMYQRGKTPERMKLPRGEKAKVSDKPGETQDITLYQLSSDMVFLNKEGQRENKSKMSLVLADLPGYGFAYASENKATTWSELMKHYLLRRGESLKRILLLIDARHGFKNADYAFLETLQNALKEGQKKGAHVSSKQQCGLEFDLPPIQIVLTKCDLCKQDDLARRVVQVKEQLSKSLKRQPSSLPVMLVSAKTGVGYNNIRRGKARGGMLQLQRELAALVP 493          
BLAST of mRNA_H-elongata_contig13768.2647.1 vs. uniprot
Match: A0A1Z5J7J0_FISSO (GTP-binding protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J7J0_FISSO)

HSP 1 Score: 155 bits (391), Expect = 7.100e-41
Identity = 103/274 (37.59%), Postives = 149/274 (54.38%), Query Frame = 0
Query:   64 SKRKQFKQITVDPKIIRHLDALGLGMEKKKVERGRKIRLYERGVVSSAAPGPTSSTSIPKTFDHPTWAVKKLLSVTRLDQI------PPFEDRLPEVAIVGRSNVGKSTLLNALLGMKKHPLE----------------------RASVSETPGETRSLDFFRLGRGKRA--KLILADMPGYGFAYAQKAQRDDWKGLMMAYLRGRGIPLKRIMLLLDARHGFKKLDIEFLELLYDP---KGLSPLGKYRPPKIQVLLTKCDLVKRIDLARRVS 304
            S+R+QF+   VDP I++++ ++G+G+      R RK R  + G     A  PTS   +P  F      V+ + SV+ ++ +      PP     PE+A +GRSNVGKSTLLN LL   ++                         +A  S  PGET+ + F+ L  G+ +  +L L D+PGYGFAYA +  +     L+ ++L+ R   LKRI+LL+DARHG KK DI+FL +L D    K  + + K   P IQV+LTKCDLV + +LARR S
Sbjct:   41 SQRQQFRDTPVDPSILKYITSIGVGIP----PRRRKNRRND-GTTDENANNPTSW-KVPLPFGPNALPVRVIASVSAVNTLDENMGFPPVHKERPEIAFIGRSNVGKSTLLNTLLYANRNENRAADGGRAGRRSRIQTIELPKGIKAVTSNKPGETKQVTFYHLSSGEDSTCRLCLVDLPGYGFAYASEETKKTVDDLIFSFLKQRQGHLKRILLLIDARHGMKKADIDFLTMLEDELVYKDSANIKKKTLPPIQVVLTKCDLVHQGELARRCS 308          
BLAST of mRNA_H-elongata_contig13768.2647.1 vs. uniprot
Match: A0A812TAA1_SYMMI (EngB protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812TAA1_SYMMI)

HSP 1 Score: 151 bits (381), Expect = 2.890e-40
Identity = 91/221 (41.18%), Postives = 131/221 (59.28%), Query Frame = 0
Query:  146 PFEDRLPEVAIVGRSNVGKSTLLNALLGMKKHPLERASVSETPGETRSLDFFRLGRGKRAK---LILADMPGYGFAYAQKAQRDDWKGLMMAYLRGRGIPLKRIMLLLDARHGFKKLDIEFL------------ELLYDPKG--------LSPLGKYRPPKIQVLLTKCDLVKRIDLARRVSLVRQQLDEVSRRQTNLPTMMLSALKGRGLTELQRELAAL 343
            P     PEVAI+GRSN GKSTL+N+LLG      +RA VS  PGET++L F+ L +  ++K   L + DMPGYGF++  + +      L  +Y+R RG  LKR++L++DARHG K+ D   L            ++  DP                    K+Q++LTKCDLV+R+DLARR++ VR Q+   +  + +LP MM+SA KG G+ ELQ+EL++L
Sbjct:   18 PMLGECPEVAIIGRSNAGKSTLVNSLLGYDSSYTKRAPVSSKPGETQALQFYVLRKQYKSKQPALGIVDMPGYGFSFTSEKEAQRCFTLNSSYIRLRGKNLKRVLLVVDARHGLKRTDFRCLHDLMSNTFRDAGDITTDPSADFDVKFDHSKKSANDATWKLQIILTKCDLVERLDLARRIAAVRDQV-RANFFEDDLPVMMVSAAKGLGIVELQKELSSL 237          
BLAST of mRNA_H-elongata_contig13768.2647.1 vs. uniprot
Match: A0A7R9YFZ8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YFZ8_9STRA)

HSP 1 Score: 150 bits (380), Expect = 1.120e-37
Identity = 90/218 (41.28%), Postives = 123/218 (56.42%), Query Frame = 0
Query:   71 QITVDPKIIRHLDALGLGMEKKKVERGRKIRLYERGVVSS--------------AAPGPTSSTSIPKTF------DHPTWAVKKLLSVTRLDQIPPFEDRLPEVAIVGRSNVGKSTLLNALLGMKKHPLERASVSETPGETRSLDFFRLG-RGKRAKLILADMPGYGFAYAQKAQRDDWKGLMMAYLRGRGIPLKRIMLLLDARHGFKKLDIEFLELL 267
            Q+    +I  +L+  GLG  K    R   +R+ +RG V S              AA    +   +PK        D   W  +++  VT  ++IP  +DRLPEV I+GRSNVGKSTLLNA+L  K HPL RA  S+ PG TR+LDF+ +G + +R ++ L D PGYGFAY +  +   W  L + +L+G    L+R++LLLDARHGFK  D  FLE L
Sbjct:   44 QVRSRAQIEAYLETRGLGRIKGDRSRSGALRIAKRGRVKSGKIKGARNQVTAVEAALLRKAELKVPKEVSEYFSRDGARWNTRRIAHVTSEEEIPAPKDRLPEVMIIGRSNVGKSTLLNAILDTKGHPLRRAETSDKPGLTRTLDFYSVGGKRQRPRMALIDAPGYGFAYGKTVELLKWHHLTLRFLQGNRPSLRRLLLLLDARHGFKAADKNFLEAL 261          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13768.2647.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KVC1_9PHAE5.630e-16371.89EngB-type G domain-containing protein n=2 Tax=Ecto... [more]
A0A835ZG72_9STRA1.580e-8951.15P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S2GV24_9STRA1.290e-5049.24Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
B7FQ16_PHATC7.840e-4234.36Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S1VXG1_9STRA1.260e-4142.80Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A1Z5JKA0_FISSO2.170e-4136.55GTP-binding protein n=1 Tax=Fistulifera solaris Ta... [more]
A0A7S1ZZ98_TRICV6.190e-4142.26Hypothetical protein n=2 Tax=Trieres chinensis Tax... [more]
A0A1Z5J7J0_FISSO7.100e-4137.59GTP-binding protein n=1 Tax=Fistulifera solaris Ta... [more]
A0A812TAA1_SYMMI2.890e-4041.18EngB protein (Fragment) n=1 Tax=Symbiodinium micro... [more]
A0A7R9YFZ8_9STRA1.120e-3741.28Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 126..344
e-value: 9.9E-47
score: 161.0
NoneNo IPR availablePANTHERPTHR11649MSS1/TRME-RELATED GTP-BINDING PROTEINcoord: 104..342
NoneNo IPR availablePANTHERPTHR11649:SF13GTP-BINDING PROTEIN ENGB-RELATEDcoord: 104..342
IPR006073GTP binding domainPFAMPF01926MMR_HSR1coord: 153..268
e-value: 3.2E-18
score: 65.8
IPR019987GTP-binding protein, ribosome biogenesis, YsxCTIGRFAMTIGR03598TIGR03598coord: 135..340
e-value: 8.1E-42
score: 141.0
IPR019987GTP-binding protein, ribosome biogenesis, YsxCHAMAPMF_00321GTPase_EngBcoord: 137..344
score: 22.289
IPR030393EngB-type guanine nucleotide-binding (G) domainPROSITEPS51706G_ENGBcoord: 150..345
score: 34.992
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 141..341

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13768contigH-elongata_contig13768:2656..7252 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13768.2647.1mRNA_H-elongata_contig13768.2647.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig13768 2656..7252 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig13768.2647.1 ID=prot_H-elongata_contig13768.2647.1|Name=mRNA_H-elongata_contig13768.2647.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=345bp
MNLAVLARSGVVRCRHLLACPSAAAPRLACPRYRYPGQLFVALSGASLYN
VRSFSGEASGGEISKRKQFKQITVDPKIIRHLDALGLGMEKKKVERGRKI
RLYERGVVSSAAPGPTSSTSIPKTFDHPTWAVKKLLSVTRLDQIPPFEDR
LPEVAIVGRSNVGKSTLLNALLGMKKHPLERASVSETPGETRSLDFFRLG
RGKRAKLILADMPGYGFAYAQKAQRDDWKGLMMAYLRGRGIPLKRIMLLL
DARHGFKKLDIEFLELLYDPKGLSPLGKYRPPKIQVLLTKCDLVKRIDLA
RRVSLVRQQLDEVSRRQTNLPTMMLSALKGRGLTELQRELAALDP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006073GTP_binding_domain
IPR019987GTP-bd_ribosome_bio_YsxC
IPR030393G_ENGB_dom
IPR027417P-loop_NTPase