prot_H-elongata_contig137572.2642.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig137572.2642.1
Unique Nameprot_H-elongata_contig137572.2642.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length67
Homology
BLAST of mRNA_H-elongata_contig137572.2642.1 vs. uniprot
Match: A0A6H5KN89_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN89_9PHAE)

HSP 1 Score: 115 bits (288), Expect = 3.950e-32
Identity = 56/62 (90.32%), Postives = 59/62 (95.16%), Query Frame = 0
Query:    4 KPYVTDNDNYIVDLYFSEPIQDAKLAGKEMLETVGVVEHGLFLDMSFAVISAGADGITVKTK 65
            KPYVTDNDNYIVDLYF++PI+DA  AGKEMLETVGVVEHGLFLDMSFAVISAG DGITVKTK
Sbjct:   36 KPYVTDNDNYIVDLYFTDPIKDANQAGKEMLETVGVVEHGLFLDMSFAVISAGTDGITVKTK 97          
BLAST of mRNA_H-elongata_contig137572.2642.1 vs. uniprot
Match: D8LDV8_ECTSI (Ribose-5-phosphate isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDV8_ECTSI)

HSP 1 Score: 115 bits (288), Expect = 1.680e-30
Identity = 56/62 (90.32%), Postives = 59/62 (95.16%), Query Frame = 0
Query:    4 KPYVTDNDNYIVDLYFSEPIQDAKLAGKEMLETVGVVEHGLFLDMSFAVISAGADGITVKTK 65
            KPYVTDNDNYIVDLYF++PI+DA  AGKEMLETVGVVEHGLFLDMSFAVISAG DGITVKTK
Sbjct:  173 KPYVTDNDNYIVDLYFTDPIKDANQAGKEMLETVGVVEHGLFLDMSFAVISAGTDGITVKTK 234          
BLAST of mRNA_H-elongata_contig137572.2642.1 vs. uniprot
Match: A0A6T5NRP6_HETAK (Ribose-5-phosphate isomerase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5NRP6_HETAK)

HSP 1 Score: 99.4 bits (246), Expect = 6.990e-24
Identity = 47/66 (71.21%), Postives = 54/66 (81.82%), Query Frame = 0
Query:    1 DGEKPYVTDNDNYIVDLYFSEPIQDAKLAGKEMLETVGVVEHGLFLDMSFAVISAGADGITVKTKK 66
            DG+KPYVTDNDNYI+DLYF EPI+D + A +EML  VGVVEHGLFLDM+ AV+ AG DGI VK  K
Sbjct:  207 DGDKPYVTDNDNYIIDLYFKEPIKDTRKAAEEMLNMVGVVEHGLFLDMTTAVLIAGKDGIEVKEAK 272          
BLAST of mRNA_H-elongata_contig137572.2642.1 vs. uniprot
Match: A0A7S3A473_9RHOD (Ribose-5-phosphate isomerase n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A473_9RHOD)

HSP 1 Score: 99.0 bits (245), Expect = 1.000e-23
Identity = 48/65 (73.85%), Postives = 54/65 (83.08%), Query Frame = 0
Query:    1 DGEKPYVTDNDNYIVDLYFSEPIQDAKLAGKEMLETVGVVEHGLFLDMSFAVISAGADGITVKTK 65
            +G+KPYVTDNDNYIVDLYF EPI+DA  A KE+LE VGVVEHGLFLDM+ AVI AG DG+ V  K
Sbjct:  209 EGDKPYVTDNDNYIVDLYFEEPIKDANAAAKEILEMVGVVEHGLFLDMTTAVIVAGKDGVEVIEK 273          
BLAST of mRNA_H-elongata_contig137572.2642.1 vs. uniprot
Match: A0A0A9JF06_ARUDO (Pco087551 n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9JF06_ARUDO)

HSP 1 Score: 94.7 bits (234), Expect = 1.450e-23
Identity = 46/65 (70.77%), Postives = 52/65 (80.00%), Query Frame = 0
Query:    1 DGEKPYVTDNDNYIVDLYFSEPIQDAKLAGKEMLETVGVVEHGLFLDMSFAVISAGADGITVKTK 65
            DG+KPYVTDN NYIVDLYF  PI+DA  AGKE+    GVVEHGLFLDM+ +VI AG DG+ VKTK
Sbjct:   61 DGDKPYVTDNSNYIVDLYFKTPIKDALAAGKEISALEGVVEHGLFLDMASSVIIAGTDGVGVKTK 125          
BLAST of mRNA_H-elongata_contig137572.2642.1 vs. uniprot
Match: A0A7S0T664_9RHOD (Ribose-5-phosphate isomerase n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T664_9RHOD)

HSP 1 Score: 97.8 bits (242), Expect = 3.670e-23
Identity = 46/65 (70.77%), Postives = 54/65 (83.08%), Query Frame = 0
Query:    1 DGEKPYVTDNDNYIVDLYFSEPIQDAKLAGKEMLETVGVVEHGLFLDMSFAVISAGADGITVKTK 65
            DGEKPYVTDNDNYIVDLYF +PI DA  A +EM+  VGVVEHGLFLDM+ AV+ AG +G+ +KTK
Sbjct:  225 DGEKPYVTDNDNYIVDLYFEKPIADANKAAEEMINMVGVVEHGLFLDMTTAVLIAGKNGVEMKTK 289          
BLAST of mRNA_H-elongata_contig137572.2642.1 vs. uniprot
Match: W1NV73_AMBTC (Ribose-5-phosphate isomerase n=3 Tax=Amborella trichopoda TaxID=13333 RepID=W1NV73_AMBTC)

HSP 1 Score: 97.1 bits (240), Expect = 6.750e-23
Identity = 45/65 (69.23%), Postives = 56/65 (86.15%), Query Frame = 0
Query:    1 DGEKPYVTDNDNYIVDLYFSEPIQDAKLAGKEMLETVGVVEHGLFLDMSFAVISAGADGITVKTK 65
            DG+KPYVTDN NYIVDLYF+ PI+D++ AG E+ +  GVVEHGLFLDM+ AVI AG+DG+T+KTK
Sbjct:  221 DGDKPYVTDNSNYIVDLYFNTPIKDSRAAGAEISKLEGVVEHGLFLDMATAVIIAGSDGVTLKTK 285          
BLAST of mRNA_H-elongata_contig137572.2642.1 vs. uniprot
Match: A0A7S1TKQ2_9RHOD (Ribose-5-phosphate isomerase n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TKQ2_9RHOD)

HSP 1 Score: 96.3 bits (238), Expect = 1.310e-22
Identity = 43/65 (66.15%), Postives = 55/65 (84.62%), Query Frame = 0
Query:    1 DGEKPYVTDNDNYIVDLYFSEPIQDAKLAGKEMLETVGVVEHGLFLDMSFAVISAGADGITVKTK 65
            DG+KPYVTDNDNYI+DLYF +PI+DA  A +EM+  VGVVEHGLFL+M+ AV+ AG +G+ +KTK
Sbjct:  220 DGDKPYVTDNDNYIIDLYFKQPIKDANKAAEEMINMVGVVEHGLFLNMTTAVLIAGKNGVEIKTK 284          
BLAST of mRNA_H-elongata_contig137572.2642.1 vs. uniprot
Match: A0A166BVV5_DAUCS (Ribose-5-phosphate isomerase n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A166BVV5_DAUCS)

HSP 1 Score: 95.9 bits (237), Expect = 1.630e-22
Identity = 47/65 (72.31%), Postives = 53/65 (81.54%), Query Frame = 0
Query:    1 DGEKPYVTDNDNYIVDLYFSEPIQDAKLAGKEMLETVGVVEHGLFLDMSFAVISAGADGITVKTK 65
            DGEKPYVTDN NYIVDLYF  PI DA  AGKE+    GVVEHGLFLDM+ AVI AG+DG++VK+K
Sbjct:  213 DGEKPYVTDNMNYIVDLYFKTPITDAPAAGKEISSLEGVVEHGLFLDMTTAVIIAGSDGVSVKSK 277          
BLAST of mRNA_H-elongata_contig137572.2642.1 vs. uniprot
Match: A0A1D1Y3A5_9ARAE (Ribose-5-phosphate isomerase n=2 Tax=Araceae TaxID=4454 RepID=A0A1D1Y3A5_9ARAE)

HSP 1 Score: 94.4 bits (233), Expect = 5.910e-22
Identity = 47/64 (73.44%), Postives = 52/64 (81.25%), Query Frame = 0
Query:    2 GEKPYVTDNDNYIVDLYFSEPIQDAKLAGKEMLETVGVVEHGLFLDMSFAVISAGADGITVKTK 65
            G KPYVTDN NYIVDLYF  PI+DA+ AGKE+    GVVEHGLFLDM+ AVI AG DGI+VKTK
Sbjct:  210 GGKPYVTDNSNYIVDLYFKTPIRDAEAAGKEISTFEGVVEHGLFLDMASAVIIAGKDGISVKTK 273          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig137572.2642.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KN89_9PHAE3.950e-3290.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LDV8_ECTSI1.680e-3090.32Ribose-5-phosphate isomerase n=1 Tax=Ectocarpus si... [more]
A0A6T5NRP6_HETAK6.990e-2471.21Ribose-5-phosphate isomerase n=1 Tax=Heterosigma a... [more]
A0A7S3A473_9RHOD1.000e-2373.85Ribose-5-phosphate isomerase n=1 Tax=Rhodosorus ma... [more]
A0A0A9JF06_ARUDO1.450e-2370.77Pco087551 n=1 Tax=Arundo donax TaxID=35708 RepID=A... [more]
A0A7S0T664_9RHOD3.670e-2370.77Ribose-5-phosphate isomerase n=1 Tax=Erythrolobus ... [more]
W1NV73_AMBTC6.750e-2369.23Ribose-5-phosphate isomerase n=3 Tax=Amborella tri... [more]
A0A7S1TKQ2_9RHOD1.310e-2266.15Ribose-5-phosphate isomerase n=1 Tax=Erythrolobus ... [more]
A0A166BVV5_DAUCS1.630e-2272.31Ribose-5-phosphate isomerase n=1 Tax=Daucus carota... [more]
A0A1D1Y3A5_9ARAE5.910e-2273.44Ribose-5-phosphate isomerase n=2 Tax=Araceae TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.260coord: 3..43
e-value: 1.2E-13
score: 52.9
NoneNo IPR availableGENE3D3.40.50.1360coord: 44..59
e-value: 1.2E-13
score: 52.9
NoneNo IPR availablePANTHERPTHR43748:SF3RIBOSE-5-PHOSPHATE ISOMERASE 3, CHLOROPLASTIC-RELATEDcoord: 3..65
NoneNo IPR availablePANTHERPTHR43748FAMILY NOT NAMEDcoord: 3..65
NoneNo IPR availableSUPERFAMILY75445D-ribose-5-phosphate isomerase (RpiA), lid domaincoord: 2..46
IPR004788Ribose 5-phosphate isomerase, type APFAMPF06026Rib_5-P_isom_Acoord: 2..59
e-value: 2.7E-14
score: 53.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig137572contigH-elongata_contig137572:1..767 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig137572.2642.1mRNA_H-elongata_contig137572.2642.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig137572 1..767 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig137572.2642.1 ID=prot_H-elongata_contig137572.2642.1|Name=mRNA_H-elongata_contig137572.2642.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=67bp
DGEKPYVTDNDNYIVDLYFSEPIQDAKLAGKEMLETVGVVEHGLFLDMSF
AVISAGADGITVKTKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004788Ribose5P_isomerase_typA