prot_H-elongata_contig137386.2633.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig137386.2633.1
Unique Nameprot_H-elongata_contig137386.2633.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length100
Homology
BLAST of mRNA_H-elongata_contig137386.2633.1 vs. uniprot
Match: A0A8C5PP25_9ANUR (Reverse transcriptase domain-containing protein n=10 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5PP25_9ANUR)

HSP 1 Score: 58.5 bits (140), Expect = 7.850e-8
Identity = 35/99 (35.35%), Postives = 51/99 (51.52%), Query Frame = 0
Query:    1 MLYGCVTWTLSPGDFDKLRETHRGMLRRCFNAYTSTRAAPDYHMLSYIEVLLRTDCECIEVAVMKRILHYAGRVARIHDDRLPIIVMRGEMVGGKRKRG 99
            +L+GC TWT+      KL   H   LR+        +  PD       EVL+R D   I   + +  L +AG VAR+ D+RLP +++ GE+  GKR +G
Sbjct:  775 LLHGCETWTIYQRHAKKLNHFHTTSLRKLLGIKWQDKV-PD------TEVLVRADLPSIFTILAQSQLRWAGHVARMKDNRLPKMLLFGELTQGKRSQG 866          
BLAST of mRNA_H-elongata_contig137386.2633.1 vs. uniprot
Match: A0A6S7JKI9_PARCT (Uncharacterized protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JKI9_PARCT)

HSP 1 Score: 52.8 bits (125), Expect = 7.210e-6
Identity = 33/99 (33.33%), Postives = 46/99 (46.46%), Query Frame = 0
Query:    1 MLYGCVTWTLSPGDFDKLRETHRGMLRRCFNAYTSTRAAPDYHMLSYIEVLLRTDCECIEVAVMKRILHYAGRVARIHDDRLPIIVMRGEMVGGKRKRG 99
            +LYG  TWTL      KL    +  LR         +         + EVL R  C  +E  + KR L +AG + R+ D+RLP I++ GE+  G R  G
Sbjct:  170 LLYGGETWTLYARHIKKLEAFQQRSLRSIMRVKWEEKTP-------HSEVLERAKCCSVESILKKRQLQWAGHIVRMDDERLPKILLYGELQQGNRMVG 261          
BLAST of mRNA_H-elongata_contig137386.2633.1 vs. uniprot
Match: A0A6S7K883_PARCT (RNA-directed DNA polymerase from mobile element jockey-like (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7K883_PARCT)

HSP 1 Score: 52.8 bits (125), Expect = 7.880e-6
Identity = 33/99 (33.33%), Postives = 46/99 (46.46%), Query Frame = 0
Query:    1 MLYGCVTWTLSPGDFDKLRETHRGMLRRCFNAYTSTRAAPDYHMLSYIEVLLRTDCECIEVAVMKRILHYAGRVARIHDDRLPIIVMRGEMVGGKRKRG 99
            +LYG  TWTL      KL    +  LR         +         + EVL R  C  +E  + KR L +AG + R+ D+RLP I++ GE+  G R  G
Sbjct:  237 LLYGGETWTLYARHIKKLEAFQQRSLRSIMRVKWEEKTP-------HSEVLERAKCCSVESILKKRQLQWAGHIVRMDDERLPKILLYGELQQGNRMVG 328          
BLAST of mRNA_H-elongata_contig137386.2633.1 vs. uniprot
Match: A0A6S7JBE9_PARCT (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JBE9_PARCT)

HSP 1 Score: 52.8 bits (125), Expect = 7.920e-6
Identity = 34/99 (34.34%), Postives = 46/99 (46.46%), Query Frame = 0
Query:    1 MLYGCVTWTLSPGDFDKLRETHRGMLRRCFNAYTSTRAAPDYHMLSYIEVLLRTDCECIEVAVMKRILHYAGRVARIHDDRLPIIVMRGEMVGGKRKRG 99
            +LYG  TWTL      KL    +  LR         +         + EVL R  C  IE  + KR L +AG + R+ D+RLP I++ GE+  G R  G
Sbjct:  253 LLYGGETWTLYARHIKKLEVFQQRSLRSIMRVNWEEKTP-------HSEVLERAKCCSIESILKKRQLQWAGHIVRMDDERLPKILLYGELQQGNRMVG 344          
BLAST of mRNA_H-elongata_contig137386.2633.1 vs. uniprot
Match: A0A7D9M5G6_PARCT (RNA-directed DNA polymerase from mobile element jockey-like (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9M5G6_PARCT)

HSP 1 Score: 52.8 bits (125), Expect = 8.280e-6
Identity = 33/99 (33.33%), Postives = 46/99 (46.46%), Query Frame = 0
Query:    1 MLYGCVTWTLSPGDFDKLRETHRGMLRRCFNAYTSTRAAPDYHMLSYIEVLLRTDCECIEVAVMKRILHYAGRVARIHDDRLPIIVMRGEMVGGKRKRG 99
            +LYG  TWTL      KL    +  LR         +         + EVL R  C  +E  + KR L +AG + R+ D+RLP I++ GE+  G R  G
Sbjct:  523 LLYGGETWTLYARHIKKLEAFQQRSLRSIMRVKWEEKTP-------HSEVLERAKCCSVESILKKRQLQWAGHIVRMDDERLPKILLYGELQQGNRMVG 614          
BLAST of mRNA_H-elongata_contig137386.2633.1 vs. uniprot
Match: A0A7D9IPZ0_PARCT (Reverse transcriptase domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IPZ0_PARCT)

HSP 1 Score: 52.0 bits (123), Expect = 1.560e-5
Identity = 33/96 (34.38%), Postives = 45/96 (46.88%), Query Frame = 0
Query:    1 MLYGCVTWTLSPGDFDKLRETHRGMLRRCFNAYTSTRAAPDYHMLSYIEVLLRTDCECIEVAVMKRILHYAGRVARIHDDRLPIIVMRGEMVGGKR 96
            +LYG  TWTL      KL    +  LR         +         + EVL R  C  IE  + KR L +AG + R+ D+RLP I++ GE+  G R
Sbjct:  714 LLYGGETWTLYARHIKKLEAFQQRSLRSIMRVKWEEKTP-------HSEVLEREKCCSIESILKKRQLQWAGHIVRMDDERLPKILLYGELQQGNR 802          
BLAST of mRNA_H-elongata_contig137386.2633.1 vs. uniprot
Match: A0A0L8FYV3_OCTBM (Uncharacterized protein (Fragment) n=1 Tax=Octopus bimaculoides TaxID=37653 RepID=A0A0L8FYV3_OCTBM)

HSP 1 Score: 47.8 bits (112), Expect = 5.380e-5
Identity = 27/90 (30.00%), Postives = 45/90 (50.00%), Query Frame = 0
Query:    7 TWTLSPGDFDKLRETHRGMLRRCFNAYTSTRAAPDYHMLSYIEVLLRTDCECIEVAVMKRILHYAGRVARIHDDRLPIIVMRGEMVGGKR 96
            TW        +L   H+  LRR +      R       +S +E+L R+ CE IE+ V+K+ L ++G + R+   R+P  +  GE+  G+R
Sbjct:    1 TWVTYRYHLKQLERLHQMCLRRIYGIKWEDR-------ISDLEILERSQCESIEILVLKQSLRWSGYLVRMQVSRMPKQLFYGELAKGER 83          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig137386.2633.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A8C5PP25_9ANUR7.850e-835.35Reverse transcriptase domain-containing protein n=... [more]
A0A6S7JKI9_PARCT7.210e-633.33Uncharacterized protein n=1 Tax=Paramuricea clavat... [more]
A0A6S7K883_PARCT7.880e-633.33RNA-directed DNA polymerase from mobile element jo... [more]
A0A6S7JBE9_PARCT7.920e-634.34Reverse transcriptase domain-containing protein (F... [more]
A0A7D9M5G6_PARCT8.280e-633.33RNA-directed DNA polymerase from mobile element jo... [more]
A0A7D9IPZ0_PARCT1.560e-534.38Reverse transcriptase domain-containing protein n=... [more]
A0A0L8FYV3_OCTBM5.380e-530.00Uncharacterized protein (Fragment) n=1 Tax=Octopus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig137386contigH-elongata_contig137386:1186..1485 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig137386.2633.1mRNA_H-elongata_contig137386.2633.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig137386 1066..1740 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig137386.2633.1 ID=prot_H-elongata_contig137386.2633.1|Name=mRNA_H-elongata_contig137386.2633.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=100bp
MLYGCVTWTLSPGDFDKLRETHRGMLRRCFNAYTSTRAAPDYHMLSYIEV
LLRTDCECIEVAVMKRILHYAGRVARIHDDRLPIIVMRGEMVGGKRKRG*
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