prot_H-elongata_contig13737.2630.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig13737.2630.1
Unique Nameprot_H-elongata_contig13737.2630.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length333
Homology
BLAST of mRNA_H-elongata_contig13737.2630.1 vs. uniprot
Match: D7FK98_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK98_ECTSI)

HSP 1 Score: 151 bits (381), Expect = 5.800e-37
Identity = 127/310 (40.97%), Postives = 148/310 (47.74%), Query Frame = 0
Query:   51 MCWDGVTSLWVFGGQGRTETRGTDFSRTHQGIKIRTLAKRTCFNDFHEFDTRTCEWRDHVQAGVCPPSRRGHTATLVVGRRLVEPKVPATPSISLESSKPSTNGHPWEGSTDSAHGSKAKGVGKRENYSPGLRSLANGNDETNGSSSHGKISEQCCWGGWSPERVDSQGDETVSHRGNVGQGGRRRAKSVERHE--------------EKEYASREMFLIGGAGTDSIRNLEVVHPQLWIFDFNHSSWACVNADNGGGXXXXXXXXX--------------VFDHTATLVGNEYIVVVGGVMVGRALNSQ 332
            MCWDG++SLWVFGGQG   ++  D SRTHQG+KIRTLA+RTCFNDF EFDT+       + AG  P     H                      LE+         W      AH         R+        L  GND   G+S + +   +    G S  R  S G  T   R   G+G                               SREMF+IGGAGTD IRN+EVV+PQLWIFDFN  +W CV A     XXXXXXXXX              VFDHTATL G  +IVV+GGVMVGRALNSQ
Sbjct:    1 MCWDGLSSLWVFGGQGAATSKA-DSSRTHQGVKIRTLARRTCFNDFFEFDTK------RLVAGPRPGGSLPH----------------------LEA---------W------AHCDPRSRAATRD--------LNLGND---GASGYRRADSESVGHGNSTPR--SPGRITPRKRSGEGEGXXXXXXXXXXXXXXXXXXXXXXXXMGRASCESREMFVIGGAGTDPIRNMEVVYPQLWIFDFNRRTWTCVEAAGXXXXXXXXXXXXXXXXXXXXGPGPPAVFDHTATLAGGTHIVVIGGVMVGRALNSQ 253          
BLAST of mRNA_H-elongata_contig13737.2630.1 vs. uniprot
Match: A0A6H5JRA7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRA7_9PHAE)

HSP 1 Score: 125 bits (314), Expect = 4.250e-28
Identity = 106/298 (35.57%), Postives = 130/298 (43.62%), Query Frame = 0
Query:   54 DGVTSLWVFGGQGRTETRGTDFSRTHQGIKIRTLAKRTCFNDFHEFDTRTCEWRDHVQAGVCPPSRRGHTATLVVGRRLVEPKVPA--TPSISLESSKPSTNGHPWEGSTDSAHGSKAKGVGKRENYSPGLRSLANGNDETNGSSSHGKISEQCCWGGWSPERVDSQGDETVSHRGNVGQGGRRRAKSVERHEEKEYASREMFLIGGAGTDSIR----NLEVVHPQLWIFDFNHSSWACVNADNGGGXXXXXXXXX-------------VFDHTATLVGNEYIVVVGGVMVGRALNSQ 332
            DG++SLWVFGGQG   ++  D SRTHQG+KIRTLA+RTCFNDF EFDT+     D          RR  + +  VG     P+ P   TP               W G  +        G           R   +G        + G+  E    GG   + +       V+ R       R  A+         Y S             +R    N+EVV+PQLWIFDFN  +W CV A  GGG XXX                  VFDHTATL G  +IVV+GGVMVGRALN Q
Sbjct:   27 DGLSSLWVFGGQGAATSKA-DSSRTHQGVKIRTLARRTCFNDFFEFDTKRVLGNDSASG-----HRRADSES--VGHGNSTPRSPGRITP-------------RKWRGEGEGGRRGAGGGXXXXXXXXXXXRESGDGGMGR----AFGESREMFVIGGAGTDPIRPPAAFVVAPRATSAGNLRMAAQPC------LYTSVLPKTRSSPNPPYVRYATKNMEVVYPQLWIFDFNRRTWTCVEAAGGGGAXXXGISKGNIPSAAAGPGPPAVFDHTATLAGGTHIVVIGGVMVGRALNGQ 293          
BLAST of mRNA_H-elongata_contig13737.2630.1 vs. uniprot
Match: A0A8J2SDP5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SDP5_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 7.920e-13
Identity = 48/139 (34.53%), Postives = 68/139 (48.92%), Query Frame = 0
Query:    1 TALFEGELYLFGGLDAGPSNSLWALNIRDLRWRPIRTKTKIVPAPRQGHTMCWDGVTSLWVFGGQGRTETRGTDFSRTHQGIKIRTL-----AKRTCFNDFHEFDTRTCEWRDHVQAGVCPPSRRGHTATLVVGRRLVE 134
            + +   ++Y+FGGL AG SN LWAL+    RW  +       PA         D   ++++FGG GR +    D+ +   G+   TL     A+R+ F+D   FD     W +     +CP  RRGHTAT   GR LVE
Sbjct:   26 SCVLGSKVYVFGGLGAGASNQLWALDTILHRWERLLPPGPKPPARSAATLAGDDDAHAVYLFGGLGRVKR---DYLKKRDGVPGATLRTQLHAQRSMFSDVWRFDGTAKRWEELTFIHMCPAPRRGHTATYCSGRVLVE 161          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13737.2630.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FK98_ECTSI5.800e-3740.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JRA7_9PHAE4.250e-2835.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A8J2SDP5_9STRA7.920e-1334.53Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13418Kelch_4coord: 45..107
e-value: 2.3E-6
score: 27.5
coord: 6..35
e-value: 4.0E-5
score: 23.5
NoneNo IPR availablePANTHERPTHR23244KELCH REPEAT DOMAINcoord: 4..322
IPR015915Kelch-type beta propellerGENE3D2.120.10.80coord: 1..133
e-value: 1.5E-9
score: 39.3
IPR015915Kelch-type beta propellerSUPERFAMILY117281Kelch motifcoord: 4..129
IPR015915Kelch-type beta propellerSUPERFAMILY117281Kelch motifcoord: 252..326

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13737contigH-elongata_contig13737:5853..7777 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13737.2630.1mRNA_H-elongata_contig13737.2630.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig13737 5852..7777 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig13737.2630.1 ID=prot_H-elongata_contig13737.2630.1|Name=mRNA_H-elongata_contig13737.2630.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=333bp
TALFEGELYLFGGLDAGPSNSLWALNIRDLRWRPIRTKTKIVPAPRQGHT
MCWDGVTSLWVFGGQGRTETRGTDFSRTHQGIKIRTLAKRTCFNDFHEFD
TRTCEWRDHVQAGVCPPSRRGHTATLVVGRRLVEPKVPATPSISLESSKP
STNGHPWEGSTDSAHGSKAKGVGKRENYSPGLRSLANGNDETNGSSSHGK
ISEQCCWGGWSPERVDSQGDETVSHRGNVGQGGRRRAKSVERHEEKEYAS
REMFLIGGAGTDSIRNLEVVHPQLWIFDFNHSSWACVNADNGGGEGPGPP
PPPVFDHTATLVGNEYIVVVGGVMVGRALNSQA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015915Kelch-typ_b-propeller