prot_H-elongata_contig137348.2627.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig137348.2627.1
Unique Name	prot_H-elongata_contig137348.2627.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	96

Homology

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BLAST of mRNA_H-elongata_contig137348.2627.1 vs. uniprot
Match: D7FM58_ECTSI (Adenine DNA glycosylase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM58_ECTSI)

HSP 1 Score: 155 bits (393), Expect = 1.000e-42
Identity = 75/95 (78.95%), Postives = 85/95 (89.47%), Query Frame = 0

Query:    1 QVNKAWAGLGYYRRAKMLHEGAKLLQTEHRGLLPCTAKDLIKIPGIGRYTAAGAVASIAFGKCEPLVDGNVIRVLSRLKAVASDPKNAALNRLCW 95
            QVNKAWAGLGYYRRAKMLHEGAK + ++H G LP TAK+L  +PGIG YTA GAVASIAFG+CEPLVDGNVIRVL+RL+A+ASDPKNA LN+LCW
Sbjct:  219 QVNKAWAGLGYYRRAKMLHEGAKKVVSDHSGCLPGTAKELKDLPGIGPYTA-GAVASIAFGECEPLVDGNVIRVLARLRAIASDPKNAGLNKLCW 312

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BLAST of mRNA_H-elongata_contig137348.2627.1 vs. uniprot
Match: A0A6B2L4Y2_9EUKA (Adenine DNA glycosylase (Fragment) n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L4Y2_9EUKA)

HSP 1 Score: 129 bits (325), Expect = 5.110e-34
Identity = 60/95 (63.16%), Postives = 77/95 (81.05%), Query Frame = 0

Query:    1 QVNKAWAGLGYYRRAKMLHEGAKLLQTEHRGLLPCTAKDLIKIPGIGRYTAAGAVASIAFGKCEPLVDGNVIRVLSRLKAVASDPKNAALNRLCW 95
            +VN+ W+GLGYYRRAK LH  AKL+  +H G LP T  +L+K+PGIG+YTA GAV+SIAFG+C PLVDGNVIRVLSRL+ + +DPK + +N+L W
Sbjct:   82 RVNEMWSGLGYYRRAKYLHSSAKLVMEKHNGQLPQTCSELLKLPGIGQYTA-GAVSSIAFGECTPLVDGNVIRVLSRLRFIRADPKASKINKLYW 175

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BLAST of mRNA_H-elongata_contig137348.2627.1 vs. uniprot
Match: A0A835YL60_9STRA (Adenine DNA glycosylase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL60_9STRA)

HSP 1 Score: 117 bits (293), Expect = 1.280e-31
Identity = 58/94 (61.70%), Postives = 71/94 (75.53%), Query Frame = 0

Query:    2 VNKAWAGLGYYRRAKMLHEGAKLLQTEHRGLLPCTAKDLIKIPGIGRYTAAGAVASIAFGKCEPLVDGNVIRVLSRLKAVASDPKNAALNRLCW 95
            VN  WAGLGYYRRA++LH GA+ +  E  G LP  A +L  IPGIG YTA GA++SIAF + EP+VDGNV+RVLSRL+A A+ PK+ AL  LCW
Sbjct:   35 VNAMWAGLGYYRRARLLHSGARAVVAERAGRLPRAAAELRAIPGIGPYTA-GAISSIAFAQREPVVDGNVVRVLSRLRACAASPKSNALVALCW 127

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BLAST of mRNA_H-elongata_contig137348.2627.1 vs. uniprot
Match: A0A024G1X1_9STRA (Adenine DNA glycosylase n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G1X1_9STRA)

HSP 1 Score: 122 bits (306), Expect = 3.200e-31
Identity = 60/95 (63.16%), Postives = 73/95 (76.84%), Query Frame = 0

Query:    1 QVNKAWAGLGYYRRAKMLHEGAKLLQTEHRGLLPCTAKDLIKIPGIGRYTAAGAVASIAFGKCEPLVDGNVIRVLSRLKAVASDPKNAALNRLCW 95
            +VN  WAGLGYYRRA+MLH GAK +   + G LP + + L+ IPGIGRYTA GA+ASIAF + EPLVDGNVIRV++RL+AV +DPKN  L  L W
Sbjct:  152 EVNSMWAGLGYYRRARMLHAGAKYVMEHYNGELPSSVEALLTIPGIGRYTA-GAIASIAFDQKEPLVDGNVIRVMARLRAVGADPKNKKLVDLSW 245

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BLAST of mRNA_H-elongata_contig137348.2627.1 vs. uniprot
Match: F0VZV0_9STRA (Adenine DNA glycosylase n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0VZV0_9STRA)

HSP 1 Score: 122 bits (307), Expect = 8.530e-31
Identity = 60/95 (63.16%), Postives = 74/95 (77.89%), Query Frame = 0

Query:    1 QVNKAWAGLGYYRRAKMLHEGAKLLQTEHRGLLPCTAKDLIKIPGIGRYTAAGAVASIAFGKCEPLVDGNVIRVLSRLKAVASDPKNAALNRLCW 95
            +VN  WAGLGYYRRA+MLH GAK +  ++ G LP + + L+ IPGIGRYTA GA+ASIAF K EPLVDGNVIRV++RL+AV +DPKN  +  L W
Sbjct:  156 EVNSMWAGLGYYRRARMLHAGAKYVMEKYDGELPSSVEALLTIPGIGRYTA-GAIASIAFDKKEPLVDGNVIRVMARLRAVGADPKNKKMIDLSW 249

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BLAST of mRNA_H-elongata_contig137348.2627.1 vs. uniprot
Match: A0A3M6VJ24_9STRA (Adenine DNA glycosylase n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VJ24_9STRA)

HSP 1 Score: 122 bits (305), Expect = 2.130e-30
Identity = 59/94 (62.77%), Postives = 71/94 (75.53%), Query Frame = 0

Query:    2 VNKAWAGLGYYRRAKMLHEGAKLLQTEHRGLLPCTAKDLIKIPGIGRYTAAGAVASIAFGKCEPLVDGNVIRVLSRLKAVASDPKNAALNRLCW 95
            VN  WAGLGYYRRA+MLH GAK +  ++ G LP T   L+ IPGIG YTA GA+ASIAFG  EPLVDGNVIRV++R++AV +DPKN  L +  W
Sbjct:  181 VNALWAGLGYYRRARMLHAGAKYVMEKYEGELPSTVDQLLTIPGIGPYTA-GAIASIAFGNREPLVDGNVIRVMARIRAVGADPKNKQLIKFSW 273

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BLAST of mRNA_H-elongata_contig137348.2627.1 vs. uniprot
Match: A0A0W8DKR7_PHYNI (Adenine DNA glycosylase n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DKR7_PHYNI)

HSP 1 Score: 119 bits (298), Expect = 2.480e-30
Identity = 59/94 (62.77%), Postives = 69/94 (73.40%), Query Frame = 0

Query:    2 VNKAWAGLGYYRRAKMLHEGAKLLQTEHRGLLPCTAKDLIKIPGIGRYTAAGAVASIAFGKCEPLVDGNVIRVLSRLKAVASDPKNAALNRLCW 95
            VN  WAGLGYYRRA+MLH GAK +   + G LP T   L+ IPGIG YTA GA+ASIAFG  EPLVDGNVIRV++R++AV +DPKN  L    W
Sbjct:   61 VNALWAGLGYYRRARMLHAGAKYVVENYGGELPSTVDQLLTIPGIGPYTA-GAIASIAFGNREPLVDGNVIRVMARMRAVGADPKNKQLINFSW 153

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BLAST of mRNA_H-elongata_contig137348.2627.1 vs. uniprot
Match: A0A225W1J9_9STRA (Adenine DNA glycosylase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W1J9_9STRA)

HSP 1 Score: 120 bits (301), Expect = 3.190e-30
Identity = 59/94 (62.77%), Postives = 70/94 (74.47%), Query Frame = 0

Query:    2 VNKAWAGLGYYRRAKMLHEGAKLLQTEHRGLLPCTAKDLIKIPGIGRYTAAGAVASIAFGKCEPLVDGNVIRVLSRLKAVASDPKNAALNRLCW 95
            VN  WAGLGYYRRA+MLH GAK +   + G +P T   L+ IPGIG YTA GA+ASIAFG  EPLVDGNVIRVL+R++AV +DPKN  L +  W
Sbjct:   70 VNALWAGLGYYRRARMLHAGAKYVMENYGGEVPSTVDQLLTIPGIGPYTA-GAIASIAFGNREPLVDGNVIRVLARMRAVGADPKNKQLIKFSW 162

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BLAST of mRNA_H-elongata_contig137348.2627.1 vs. uniprot
Match: A0A329SIH5_9STRA (Adenine DNA glycosylase n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SIH5_9STRA)

HSP 1 Score: 120 bits (300), Expect = 1.140e-29
Identity = 60/94 (63.83%), Postives = 69/94 (73.40%), Query Frame = 0

Query:    2 VNKAWAGLGYYRRAKMLHEGAKLLQTEHRGLLPCTAKDLIKIPGIGRYTAAGAVASIAFGKCEPLVDGNVIRVLSRLKAVASDPKNAALNRLCW 95
            VN  WAGLGYYRRA+MLH GAK +   + G LP T   L+ IPGIG YTA GA+ASIAFG  EPLVDGNVIRV++R++AV SDPKN  L    W
Sbjct:  178 VNALWAGLGYYRRARMLHAGAKYVVENYGGELPSTVDQLLTIPGIGPYTA-GAIASIAFGSREPLVDGNVIRVMARVRAVGSDPKNKQLINFSW 270

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BLAST of mRNA_H-elongata_contig137348.2627.1 vs. uniprot
Match: A0A833SGU5_PHYIN (Adenine DNA glycosylase n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SGU5_PHYIN)

HSP 1 Score: 119 bits (299), Expect = 1.490e-29
Identity = 59/94 (62.77%), Postives = 70/94 (74.47%), Query Frame = 0

Query:    2 VNKAWAGLGYYRRAKMLHEGAKLLQTEHRGLLPCTAKDLIKIPGIGRYTAAGAVASIAFGKCEPLVDGNVIRVLSRLKAVASDPKNAALNRLCW 95
            VN  WAGLGYYRRA+MLH GAK +   + G LP T   L+ IPGIG YTA GA+ASIAFG  EPLVDGNVIRV++R++AV +DPKN  L +  W
Sbjct:  181 VNALWAGLGYYRRARMLHAGAKYVVENYDGELPSTVDQLLTIPGIGPYTA-GAIASIAFGNREPLVDGNVIRVMARMRAVGADPKNKQLIKYSW 273

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig137348.2627.1 vs. uniprot

BLAST of mRNA_H-elongata_contig137348.2627.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FM58_ECTSI	1.000e-42	78.95	Adenine DNA glycosylase n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A6B2L4Y2_9EUKA	5.110e-34	63.16	Adenine DNA glycosylase (Fragment) n=1 Tax=Arcella...	[more]
A0A835YL60_9STRA	1.280e-31	61.70	Adenine DNA glycosylase (Fragment) n=1 Tax=Tribone...	[more]
A0A024G1X1_9STRA	3.200e-31	63.16	Adenine DNA glycosylase n=1 Tax=Albugo candida Tax...	[more]
F0VZV0_9STRA	8.530e-31	63.16	Adenine DNA glycosylase n=1 Tax=Albugo laibachii N...	[more]
A0A3M6VJ24_9STRA	2.130e-30	62.77	Adenine DNA glycosylase n=1 Tax=Peronospora effusa...	[more]
A0A0W8DKR7_PHYNI	2.480e-30	62.77	Adenine DNA glycosylase n=1 Tax=Phytophthora nicot...	[more]
A0A225W1J9_9STRA	3.190e-30	62.77	Adenine DNA glycosylase n=1 Tax=Phytophthora megak...	[more]
A0A329SIH5_9STRA	1.140e-29	63.83	Adenine DNA glycosylase n=1 Tax=Phytophthora cacto...	[more]
A0A833SGU5_PHYIN	1.490e-29	62.77	Adenine DNA glycosylase n=1 Tax=Phytophthora infes...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003265	HhH-GPD domain	SMART	SM00478	endo3end	coord: 1..94 e-value: 0.0012 score: 9.4
IPR003265	HhH-GPD domain	PFAM	PF00730	HhH-GPD	coord: 2..92 e-value: 5.3E-7 score: 30.2
None	No IPR available	GENE3D	1.10.340.30		coord: 1..62 e-value: 9.8E-18 score: 66.7
None	No IPR available	PANTHER	PTHR42944	FAMILY NOT NAMED	coord: 1..95
IPR000445	Helix-hairpin-helix motif	PFAM	PF00633	HHH	coord: 29..51 e-value: 2.1E-6 score: 27.3
IPR004036	Endonuclease III-like, conserved site-2	PROSITE	PS01155	ENDONUCLEASE_III_2	coord: 31..59
IPR011257	DNA glycosylase	SUPERFAMILY	48150	DNA-glycosylase	coord: 2..87

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig137348	contig	H-elongata_contig137348:190..789 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig137348.2627.1	mRNA_H-elongata_contig137348.2627.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig137348 190..789 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig137348.2627.1 ID=prot_H-elongata_contig137348.2627.1|Name=mRNA_H-elongata_contig137348.2627.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=96bp
QVNKAWAGLGYYRRAKMLHEGAKLLQTEHRGLLPCTAKDLIKIPGIGRYT
AAGAVASIAFGKCEPLVDGNVIRVLSRLKAVASDPKNAALNRLCW*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003265	HhH-GPD_domain
IPR000445	HhH_motif
IPR004036	Endonuclease-III-like_CS2
IPR011257	DNA_glycosylase