prot_H-elongata_contig137197.2618.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig137197.2618.1
Unique Nameprot_H-elongata_contig137197.2618.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length213
Homology
BLAST of mRNA_H-elongata_contig137197.2618.1 vs. uniprot
Match: A0A6H5JTT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT4_9PHAE)

HSP 1 Score: 151 bits (381), Expect = 5.140e-39
Identity = 96/241 (39.83%), Postives = 131/241 (54.36%), Query Frame = 0
Query:    1 NNNKECEYDEGDCCDCN-------SGDN-----KSSSMLCVDP-----NDNCYSLVAVALHSNCTTGIIEDIGNSECDIENNSKGCLYDGGDCCNCTSGNN----GSSFVLCVDPNHNCYSLDAVSLQSNCTSGIIEDIGNSQCDMKNNIEECLYDGGDCCNCTTSVGDDSS----SFYSWS--FFCVDPNATCY-DLAARVKMYPNCNDGDIRSIGDGYCDRESNNEKCNYDGGDCCDCT 213
            NN +EC+YD GDCC C        +GD+     +S+   C+DP     ND+ ++     +      G I  + + +CD  NN++ C YDGGDCC CT  ++    G     C+DP+  C   D V++ +    G+   IG+ QCD+ NN EEC YDGGDCC+CT  V DD S    S  S S  F C+DP+A C  D    V M   C    I + GDG+CD ++NN++C YD GDCC CT
Sbjct:  113 NNTEECDYDGGDCCSCTCQVPDDGTGDDGSLCGESAVFACIDPDAPCVNDDDFTAFLPEVVKETCGGNIVHLADGDCDQINNNEECGYDGGDCCFCTCLDDFYECGIRGFACIDPSAECADDDDVTVDTVENCGV-RSIGDGQCDLDNNREECHYDGGDCCSCTCQVPDDDSGDDGSLCSESTVFACIDPDAPCVNDDDITVDMMDTCGGHPI-NFGDGWCDDDNNNKECGYDSGDCCSCT 351          
BLAST of mRNA_H-elongata_contig137197.2618.1 vs. uniprot
Match: A0A6H5KJK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJK5_9PHAE)

HSP 1 Score: 149 bits (377), Expect = 4.290e-38
Identity = 88/223 (39.46%), Postives = 116/223 (52.02%), Query Frame = 0
Query:    8 YDEGDCCDCNSGDNKSS----SMLCVDPNDNCYS----LVAVALHSNCTTGIIEDIGNSECDIENNSKGCLYDGGDCCNCTSGNN----GSSFVLCVDPNHNCYSLDAVS--LQSNCTSG--IIEDIGNSQCDMKNNIEECLYDGGDCCNCTTSV-GDDSSSFYSWSFFCVDPNATCYDLAARVKMYPNCNDGDIRSIGDGYCDRESNNEKCNYDGGDCCDCT 213
            YD GDCC+C   D   +       C+DP+  C         +A   N   G +  IG+  C  ENN++ C YDGGDCC CT  +     G     C+DP+  C   D ++  +  +C  G   +  +GN  C+  NNIEEC YD GDCC CT  +  DD S F    F CVDPNA C D      M+ +C      + GDG+C+  +NNE+C YDGGDCC+CT
Sbjct:   19 YDGGDCCECTCVDASFTCGYGGFACIDPSAACVDDDNITEDIAESCNDGGGYVASIGDGFCSDENNNEVCDYDGGDCCECTCVDAFYPCGYVAFACIDPSAACVDDDNITADIAESCHDGGGYVAGLGNGYCNEANNIEECDYDAGDCCQCTCGIESDDLSDFSCVDFACVDPNAPCVDDDVTEGMFEDC-----FNFGDGFCNDYNNNEQCGYDGGDCCECT 236          
BLAST of mRNA_H-elongata_contig137197.2618.1 vs. uniprot
Match: D7G4F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4F9_ECTSI)

HSP 1 Score: 144 bits (363), Expect = 4.030e-37
Identity = 92/238 (38.66%), Postives = 125/238 (52.52%), Query Frame = 0
Query:    1 NNNKECEYDEGDCCDCN-----SGDN------KSSSMLCVDPNDNCYSLVAVALHSNCTTGIIEDIGNSECDIENNSKGCLYDGGDCCNCTS--------GNN-----GSSFVLCVDPNHNCYSLDAVSLQSNCTSGIIEDIGNSQCDMKNNIEECLYDGGDCCNCTTSVGDDSSSFYSWSFFCVDPNATCYDL-AARVKMYPNCNDGDIRSIGDGYCDRESNNEKCNYDGGDCCDCT 213
            NNN EC YD GDCC+C       GD+        S   CVDP+  CY+   V + ++       D+G+  CD  NN++ C YDGGDCC CT          N+     G  F  C+DP+  C + D +++  + +   +  +G+  CDM NN   C YDGGDCC CT    +         F C+DP A C D  +  V M  NC+   +R +G+G+CD E+NNE C YDGGDCC+CT
Sbjct:   45 NNNAECGYDGGDCCECTCQNPQGGDHHWICSKNGSGFACVDPDAPCYAEDGVTVEASQECDFW-DLGDGWCDQVNNNELCGYDGGDCCECTCEVPTDDDWDNDLYVACGEGFA-CIDPSAPCVNDDDITVDVDESCDAVG-MGDGYCDMDNNNAACAYDGGDCCECTCEPNNKCGG--RSGFACIDPGAPCVDDDSVTVDMIDNCDY--LRVMGNGWCDEENNNELCAYDGGDCCECT 275          
BLAST of mRNA_H-elongata_contig137197.2618.1 vs. uniprot
Match: D7FSR3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSR3_ECTSI)

HSP 1 Score: 111 bits (278), Expect = 2.670e-26
Identity = 69/161 (42.86%), Postives = 81/161 (50.31%), Query Frame = 0
Query:   64 NNSKGCLYDGGDCCNCTSGNNGSSF-------VLCVDPNHNCYSLDAVSLQSNCTSGIIED---IGNSQCDMKNNIEECLYDGGDCCNCTTSVGDDSSSFYSWSFFCVDPNATCYDLA-ARVKMYPNCNDGDIRSIGDGYCDRESNNEKCNYDGGDCCDCT 213
            NN + C YD GDCC CT G               CVDPN  C   D        T G+ ED    G+  C+  NN E+C YDGGDCC CT  V D S+ F    F C+DP A C D          NC    +  +GDGYCD  +N E C+YDGGDCC+CT
Sbjct:    5 NNIEECDYDAGDCCQCTCGIESDDLPDFSCVDFACVDPNAPCVDDDV-------TEGMFEDCFNFGDGFCNDYNNNEQCGYDGGDCCECTCVV-DWSAEFGCTEFACIDPTAPCVDDDDVTADALENCM---MEYLGDGYCDTYNNIEICDYDGGDCCECT 154          
BLAST of mRNA_H-elongata_contig137197.2618.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI)

HSP 1 Score: 107 bits (267), Expect = 3.050e-23
Identity = 69/175 (39.43%), Postives = 88/175 (50.29%), Query Frame = 0
Query:   42 ALHSNCTTGIIEDIGNSECDIENNSKGCLYDGGDCCNCTSGNNGSSFVLCVD-PNHNCYSLDAVSLQSNCT-SGIIEDIGNSQ-CDMKNNIEECLYDGGDCCNCTTSVGDDSSSFYSWSFFCVDPNATCYDLAARVKMYPNCNDGDIRSIGDGYCDRESNNEKCNYDGGDCCDCT 213
            A ++NC  G + DIGN +CD   N   C YDGGDCC CT          CVD P H+C + D   +  +C  S   ED      CD+ NN   C YDGGDCC C+   G D     S  F C+DP+  C +          C +     + DGYCD  +N   C+YDGGDCC+C+
Sbjct:   24 AQYANCN-GTVTDIGNGQCDAVLNVPSCGYDGGDCCPCT----------CVDGPTHSCSTSDFDCMYPDCGGSECHEDWAKDGFCDLVNNHPSCDYDGGDCCECSCIDGPDYGCG-SIGFACLDPD--CGNTTETAPENTTCEES---WMNDGYCDSSNNYPSCDYDGGDCCECS 181          
BLAST of mRNA_H-elongata_contig137197.2618.1 vs. uniprot
Match: D7G0S4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S4_ECTSI)

HSP 1 Score: 103 bits (256), Expect = 6.870e-23
Identity = 62/170 (36.47%), Postives = 84/170 (49.41%), Query Frame = 0
Query:    1 NNNKECEYDEGDCCDC-----NSGDNKS--------SSMLCVDPNDNCYSLVAVALHSNCTTGIIED-----IGNSECDIENNSKGCLYDGGDCCNCTSGNNGS------SFVLCVDPNHNCYSLDAVSLQSNCTSGIIEDIGNSQCDMKNNIEECLYDGGDCCNCTTSV 146
            NNN+ C YD GDCC+C     ++ D           +   C+DPN  C +        + T  I+E+     +GN  CD++NN++ C YDGGDCC CT  +  +      S   C+DP   C   D+ ++    +       GN  CD  NNIEEC YDGGDCC CT  V
Sbjct:  139 NNNEGCGYDGGDCCECTCQPLDTDDGTDDYFQNGCGNGFACIDPNAPCVN------DDDITLDIVENCDSVAVGNGFCDMDNNNEACAYDGGDCCECTCEDQPNQECGRWSGFACIDPEAPCVDEDSFTVDMVESCKYPGSFGNGWCDEDNNIEECAYDGGDCCECTCEV 302          
BLAST of mRNA_H-elongata_contig137197.2618.1 vs. uniprot
Match: D8LEP6_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEP6_ECTSI)

HSP 1 Score: 104 bits (259), Expect = 8.140e-23
Identity = 53/99 (53.54%), Postives = 65/99 (65.66%), Query Frame = 0
Query:  116 EDIGNSQCDMKNNIEECLYDGGDCCNCTTSVGDDSSSFYSWSFFCVDPNATCYDL-AARVKMYPNCNDGDIRSIGDGYCDRESNNEKCNYDGGDCCDCT 213
            +DIGN +C+M NNIEEC +DGGDCC CT   G+ +   Y + + C+DP+ATC D  A  V M  NC D     IG+G CD   NNE C YDGGDCC+CT
Sbjct:   96 QDIGNGRCNMGNNIEECGFDGGDCCECTCEDGEYTCGQY-YGYACIDPDATCVDDDAVTVDMMENCYDPS--RIGNGACDSLLNNEDCAYDGGDCCECT 191          
BLAST of mRNA_H-elongata_contig137197.2618.1 vs. uniprot
Match: D7FI87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI87_ECTSI)

HSP 1 Score: 99.4 bits (246), Expect = 1.550e-20
Identity = 63/167 (37.72%), Postives = 82/167 (49.10%), Query Frame = 0
Query:    1 NNNKECEYDEGDCCDCNS----GDNKS-------SSMLCVDPNDNCYSL--VAVALHSNCTTGIIEDIGNSECDIENNSKGCLYDGGDCCNCTS-----------GNNGSSFVLCVDPNHNCYSLDAVSLQSNCTSGIIEDIGNSQCDMKNNIEECLYDGGDCCNCT 143
            NNN EC YD GDCC+C      GD+             C+DP+  C     + + +  NC T    D+GN  CD +NN++ C YD GDCC CT             ++GS F  C+DP   C   D V++      G +  +G+  CD  NN E C YDGGDCC CT
Sbjct:   38 NNNAECGYDGGDCCECTCQNPWGDDDEWFCSKDGYGFACIDPDAPCVDDDDITIEIAQNCVTS---DLGNGYCDEDNNNEICGYDFGDCCECTCVSPWDDDDWYCSSDGSGFA-CIDPAAPCVDDDDVTIDMVENCGYVRGLGDGWCDDWNNNELCGYDGGDCCECT 200          
BLAST of mRNA_H-elongata_contig137197.2618.1 vs. uniprot
Match: D8LEX5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEX5_ECTSI)

HSP 1 Score: 96.3 bits (238), Expect = 1.360e-19
Identity = 72/212 (33.96%), Postives = 99/212 (46.70%), Query Frame = 0
Query:    1 NNNKECEYDEGDCCDCN-------SGDNKSSSMLCVDPNDNCYS---LVAVALHSNCTTGIIEDIGNSECDIENNSKGCLYDGGDCCNCTSGNN-------GSSFVLCVDPNHNCYSLD-AVSLQSNCTSGIIEDIGNSQCDMKNNIEECLYDGGDCCNCTTSVGDDSS--SFYSWSFFCVDP-----NATCYDLAARVKMYPNCNDGDIRS 187
            NNN++C YD GDCC+C        S ++  +   C+DP   C     + A A+ S C   II+ +G+  CD  NN + C YD GDCC CT             S   CVDP  +C+     V +  NC + ++   G+  C   NN E C YD GDCC  T  V    S   F   SF C+DP     + T   L++     P+C +G + S
Sbjct:   17 NNNEQCGYDGGDCCECTCVVSTLWSTESSCTEFACIDPRAPCADDDDITADAVES-C---IIDYLGDGICDTSNNIETCGYDSGDCCECTXXXXXXXXXXXSCSDFACVDPMASCFDESITVDMFENCDAELL---GDGYCQESNNNEICDYDFGDCCESTCGVDFSESLDEFACSSFACIDPRFVTQSPTPAPLSSECPGGPSCEEGMLES 221          
BLAST of mRNA_H-elongata_contig137197.2618.1 vs. uniprot
Match: A0A2E8S136_9DELT (Uncharacterized protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A2E8S136_9DELT)

HSP 1 Score: 91.7 bits (226), Expect = 8.270e-18
Identity = 78/263 (29.66%), Postives = 102/263 (38.78%), Query Frame = 0
Query:    1 NNNKECEYDEGDCCDCNSGDNKSSSML---CVDPNDNCYSLVAVALHSNCTTGIIEDIGNSECDIENNSKGCLYDGGDCCNCTSGN--------------------------NGSSFVLCVDPNHNCYSLDAVSLQSNCTSGIIEDIGNSQCDMKNNIEECLYDGGDCCNCT------------------------TSVGDDSSSFYSWSFFCVDPNATCYDLAARVKMYPNCNDGDIRSIGDGYCDRESNNEKCNYDGGDCC 210
            NNN  C++D GDCC+  +     S+     C DP+                 G     G+  CD  NN+  C YDGGDCCN  S                            +G++F  C    +NC + DA     +        IG+  C+  NNIE+C YDGGDCCN +                         SV  D ++  +W   C DP A   + AA           D   IGD  CD  +NNE C +DGGDCC
Sbjct:  406 NNNAPCDFDGGDCCESTNASCAGSTFYPCDCQDPDSXXGQ-----------GGDASTSGDGSCDEGNNNAVCGYDGGDCCNTNSXXXXXXXXXXXXXXXXXXXXXXXGSTCVSGATFA-CESGGYNCLNPDACESYPDTE---FLSIGDGTCNTGNNIEQCGYDGGDCCNASWDGXXXXXXXXXXXXXXXXXXXXXESVNADCATSGTWPCDCQDPAACDSNEAA-----------DFTKIGDEICDLSNNNEACGWDGGDCC 642          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig137197.2618.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A6H5JTT4_9PHAE5.140e-3939.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJK5_9PHAE4.290e-3839.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G4F9_ECTSI4.030e-3738.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FSR3_ECTSI2.670e-2642.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G5Y7_ECTSI3.050e-2339.43Polymorphic Outer membrane protein G/I family n=1 ... [more]
D7G0S4_ECTSI6.870e-2336.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LEP6_ECTSI8.140e-2353.54Uncharacterized protein n=3 Tax=Ectocarpus silicul... [more]
D7FI87_ECTSI1.550e-2037.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LEX5_ECTSI1.360e-1933.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A2E8S136_9DELT8.270e-1829.66Uncharacterized protein n=1 Tax=Myxococcales bacte... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000800Notch domainSMARTSM00004NL_2coord: 40..77
e-value: 0.0022
score: 22.3
coord: 160..210
e-value: 0.022
score: 14.0
coord: 103..140
e-value: 7.8E-4
score: 25.9
IPR000800Notch domainPFAMPF00066Notchcoord: 186..209
e-value: 1.0E-4
score: 22.7
IPR000800Notch domainPROSITEPS50258LNRcoord: 35..76
score: 8.843
IPR000800Notch domainPROSITEPS50258LNRcoord: 175..209
score: 10.272
IPR000800Notch domainPROSITEPS50258LNRcoord: 108..139
score: 8.797
NoneNo IPR availableGENE3D3.30.300.240coord: 104..212
e-value: 3.7E-5
score: 25.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig137197contigH-elongata_contig137197:17..838 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig137197.2618.1mRNA_H-elongata_contig137197.2618.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig137197 17..838 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig137197.2618.1 ID=prot_H-elongata_contig137197.2618.1|Name=mRNA_H-elongata_contig137197.2618.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=213bp
NNNKECEYDEGDCCDCNSGDNKSSSMLCVDPNDNCYSLVAVALHSNCTTG
IIEDIGNSECDIENNSKGCLYDGGDCCNCTSGNNGSSFVLCVDPNHNCYS
LDAVSLQSNCTSGIIEDIGNSQCDMKNNIEECLYDGGDCCNCTTSVGDDS
SSFYSWSFFCVDPNATCYDLAARVKMYPNCNDGDIRSIGDGYCDRESNNE
KCNYDGGDCCDCT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000800Notch_dom