prot_H-elongata_contig137195.2617.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig137195.2617.1
Unique Nameprot_H-elongata_contig137195.2617.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length73
Homology
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BLAST of mRNA_H-elongata_contig137195.2617.1 vs. uniprot
Match: D7G522_ECTSI (MYND-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G522_ECTSI)

HSP 1 Score: 120 bits (301), Expect = 1.320e-30
Identity = 59/73 (80.82%), Postives = 67/73 (91.78%), Query Frame = 0 
Query:    1 MVNHNEFGVTEEEFQELGNDEGRVQELLLDKMKRFISKHPEAAGHDSIKTLTALAVDELLLNGSLENARLLYQ 73
            MVNHNEFG+TEEEF+E GNDE  VQ+LLL KMK FI+KHPEAAG D+IKTLTALAVDELLLNG+LENARL++Q
Sbjct:    2 MVNHNEFGITEEEFEEHGNDEAAVQDLLLQKMKNFITKHPEAAGDDAIKTLTALAVDELLLNGNLENARLVFQ 74
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig137195.2617.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G522_ECTSI1.320e-3080.82MYND-type domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig137195contigH-elongata_contig137195:138..804 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig137195.2617.1mRNA_H-elongata_contig137195.2617.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig137195 138..818 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig137195.2617.1 ID=prot_H-elongata_contig137195.2617.1|Name=mRNA_H-elongata_contig137195.2617.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=73bp
MVNHNEFGVTEEEFQELGNDEGRVQELLLDKMKRFISKHPEAAGHDSIKT
LTALAVDELLLNGSLENARLLYQ
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