prot_H-elongata_contig13714.2614.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig13714.2614.1
Unique Nameprot_H-elongata_contig13714.2614.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length1018
Homology
BLAST of mRNA_H-elongata_contig13714.2614.1 vs. uniprot
Match: D7G359_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G359_ECTSI)

HSP 1 Score: 475 bits (1222), Expect = 9.350e-140
Identity = 386/1079 (35.77%), Postives = 495/1079 (45.88%), Query Frame = 0
Query:    9 GQVTKTVGMGYLYRLYEDNTSKGEAQQRNIPFEEWRAAEEAGGGNIRRLPLQGRYQAQHDMTREMNLRDWAYWR-------PEAEHG--------------ENLYQFMLSPPPGRERFVIGMGTIDKAPLLFYHLLDLANNMESHGLAAHAAVPLALCELVARLCLGPKYVLSAPRAP-----GTQPEALGSKAEINKEAFPALTLACLRRSRLLLKLGPTYQRAAMEAIAAAGRLGISIEEAKRRGMEVDRLLRQREKESV-----------------IEIISSEP-----------SPFWDTTSLPEVASEEAEGK---EVDRDVSGKSVAVTYLGKLEDRRIWALIAKEAILLEECQAAAEYLAAAQMHNEAFHDLENTASCFEIQAALCEAQGYPERALPCLLKASALLRSNGIPGTTATRWSDLAIAMVRASNKAGMGDARTRQVLQVSCEALKGRV------SQVTAPLEWVADGGEEADT------SPTDGVELDAIVAFSWCSSLLAETYKVLPPTSETKLPSLGVVAEGNQQQDADHIATNAWNFKSVQKHYAPDGGELGKPATMKPIYSTNNANRGTLRVQPDDALELLARVAETLRPLGPHPALAAVLRKMAKAWVCRWAAGSTTLSTHRLSAARIVDPGTRTANLENGMDEQQVAECSRFVTSMEHPPQLWCFLENAAANLAEARTVLSAIAASAEPVQEILPISPLIAQGSRPPSGEEIKKVVGRGPEKNKNSGKNIKGLSSSDLNDAAAGSNKDSLNPSSRQPAAVSTPLGRFLVIGQLEEACVRVMLGRAKGEHMSEKQTKKASADEKGLMLVQRYMEATKPASQPTAADMALPQIEQALALAGNATQLLLSSSHEFSPGWTNESQKGLPGVFGTRVMGLLPLALAWEGSALAMLATRAGLSDGSWSPRSYAPIRPPIPSPQITSGSGGKGGSSNAGAKRANAGKARKASKGGSMPDGMKNDLEQNPVPPPPLKEGFDLHNQARWRLEQAVEIAVASKRWDAAGVAAFALGELLGGDDASTTAAAFMLHQSCRARDRLRRWLHEALPRSNRCRLSLDRVTAAQG 1018
            G V +TV  G    L+E +  +G  ++    F+EW A+                  A       ++LRDWAYWR       P+ ++G              ++L ++M +PP GRE FVI   T++KAPLLF+HLLDLA  MESHGLAAHAA PLAL ELVARLCLGP        +      G   E +G     N   FPAL LA LRR+RLL KLGPT   AAM+A +AAG LG+S EEA RRG EVDR+LRQR++ S+                 +   SS P           S   +T+S  +  +    G+   +V  D  G+ V V  LG LEDR++WA++A EA+ L EC+AAAEYLAAA  HN+AFHD  N  SC E QAALC+AQG+P+RALPCLL+ASALL++ G+ G+TA RW  +AIA+     K G GDA+ RQ LQ +C+AL+  +      ++ +AP    A+GG+ A        +P+  V+LDA +AFS C  LLAE        +++    +G   + N                        D G      TM   YS+                                       R             +TT++T                                                                                               ++GR                                             + R L + QLEEACVR MLGRAKG+  S  Q  +A+A+ +G+  VQ+YMEA++P   PT  +M+LPQIEQALALA  A +    SS          S  G  GV  T   GLLPL LAWEGSALA+LA+RAGLSDG+W PR   P                                                   + P P  P++EGFDL  QARW+LEQA+E AVA+KRWDAAGVAAFAL E+LGGDDAS  AAA MLHQSCRAR R+ R L  ALP+SNR RL +DRV+AAQG
Sbjct: 1793 GMVEETVECGRRRWLFEASVPEG-GERGETAFQEWCASSXXXXXXXXXXXXXXNSTA--GGRAPLHLRDWAYWRLEPVPVEPKDDNGGDKNNHDSVDDNGEDDLDRYMAAPPAGREPFVISTTTMEKAPLLFHHLLDLAETMESHGLAAHAAAPLALAELVARLCLGPARRRGGGGSXXDGTDGKGAEDVGEDGSAN--VFPALALARLRRARLLFKLGPTCHEAAMQAASAAGPLGVSAEEAARRGSEVDRILRQRKEYSLQQPWQKQEQQPGMPGRNVSAASSLPPAQSTQTRFDGSTLNNTSSGLDPRTAVGVGRKSHDVADDSEGREVEVPRLGNLEDRKVWAMLATEAVQLGECRAAAEYLAAAHRHNDAFHDRNNVVSCLEAQAALCDAQGHPDRALPCLLRASALLKTLGVTGSTAVRWGKMAIAIGSMMRKMGTGDAKIRQTLQAACDALERSIFRGVHKAENSAPATAAAEGGQAAQPQGGAPPTPSQTVDLDAAIAFSGCVCLLAEASTASDELTQSSSSEVGTATKAN------------------------DRGTSRTGTTMT-AYSSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR-------------ATTVAT-----------------------------------------------------------------------------------------------IMGR-------------------------------------------RSVRRCLTMVQLEEACVRAMLGRAKGDGHSSTQAAEAAANREGVTPVQKYMEASRPLGHPTVEEMSLPQIEQALALAEMARERCSLSS----------SSGGKSGV--TTNPGLLPLTLAWEGSALALLASRAGLSDGAWVPR--PPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEPAPVLPMQEGFDLREQARWKLEQAMEAAVAAKRWDAAGVAAFALAEMLGGDDASAAAAALMLHQSCRARGRMLRLLRGALPQSNRYRLFMDRVSAAQG 2676          
BLAST of mRNA_H-elongata_contig13714.2614.1 vs. uniprot
Match: A0A6H5JQG0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQG0_9PHAE)

HSP 1 Score: 144 bits (364), Expect = 3.590e-34
Identity = 98/220 (44.55%), Postives = 125/220 (56.82%), Query Frame = 0
Query:    9 GQVTKTVGMGYLYRLYEDNTSKGEAQQRNIPFEEWRAAEEAGGGNIRRLPLQGRYQAQHDMTREMNLRDWAYWRPEA--------------------EHGEN-LYQFMLSPPPGRERFVIGMGTIDKAPLLFYHLLDLANNMESHGLAAHAAVPLALCELVARLCLGPKYVLSAPRAPGTQPEALGSKAEINKE----AFPALTLACLRRSRLLLKLGPT 203
            G V +TV  G    L+E++  +G  +   + F+EW A+  + GG   R PL              +LRDWAYWR E                     E+GE+ L ++M +PP GRE FVI    I+KAPLLF+HLLDLA  MESHGLAAHAA PLAL ELVARLCLGP    +   + G   +  G++ +I ++    AFPAL LA LRR+RLL KLGPT
Sbjct:  136 GMVEETVECGRRRWLFEESVPEG-GEGGEMAFQEWCAS--SSGGYSGRAPL--------------HLRDWAYWRLEPVPVEPKDDNGGDKNNYDSVDENGEDDLDRYMATPPAGREPFVISTTIIEKAPLLFHHLLDLAETMESHGLAAHAAAPLALAELVARLCLGPARRRNGGGSGGVGTDGKGAE-DIGEDGSGNAFPALALARLRRARLLFKLGPT 337          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13714.2614.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G359_ECTSI9.350e-14035.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JQG0_9PHAE3.590e-3444.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13714contigH-elongata_contig13714:809..7949 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13714.2614.1mRNA_H-elongata_contig13714.2614.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig13714 684..7949 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig13714.2614.1 ID=prot_H-elongata_contig13714.2614.1|Name=mRNA_H-elongata_contig13714.2614.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=1018bp
MAAAENEIGQVTKTVGMGYLYRLYEDNTSKGEAQQRNIPFEEWRAAEEAG
GGNIRRLPLQGRYQAQHDMTREMNLRDWAYWRPEAEHGENLYQFMLSPPP
GRERFVIGMGTIDKAPLLFYHLLDLANNMESHGLAAHAAVPLALCELVAR
LCLGPKYVLSAPRAPGTQPEALGSKAEINKEAFPALTLACLRRSRLLLKL
GPTYQRAAMEAIAAAGRLGISIEEAKRRGMEVDRLLRQREKESVIEIISS
EPSPFWDTTSLPEVASEEAEGKEVDRDVSGKSVAVTYLGKLEDRRIWALI
AKEAILLEECQAAAEYLAAAQMHNEAFHDLENTASCFEIQAALCEAQGYP
ERALPCLLKASALLRSNGIPGTTATRWSDLAIAMVRASNKAGMGDARTRQ
VLQVSCEALKGRVSQVTAPLEWVADGGEEADTSPTDGVELDAIVAFSWCS
SLLAETYKVLPPTSETKLPSLGVVAEGNQQQDADHIATNAWNFKSVQKHY
APDGGELGKPATMKPIYSTNNANRGTLRVQPDDALELLARVAETLRPLGP
HPALAAVLRKMAKAWVCRWAAGSTTLSTHRLSAARIVDPGTRTANLENGM
DEQQVAECSRFVTSMEHPPQLWCFLENAAANLAEARTVLSAIAASAEPVQ
EILPISPLIAQGSRPPSGEEIKKVVGRGPEKNKNSGKNIKGLSSSDLNDA
AAGSNKDSLNPSSRQPAAVSTPLGRFLVIGQLEEACVRVMLGRAKGEHMS
EKQTKKASADEKGLMLVQRYMEATKPASQPTAADMALPQIEQALALAGNA
TQLLLSSSHEFSPGWTNESQKGLPGVFGTRVMGLLPLALAWEGSALAMLA
TRAGLSDGSWSPRSYAPIRPPIPSPQITSGSGGKGGSSNAGAKRANAGKA
RKASKGGSMPDGMKNDLEQNPVPPPPLKEGFDLHNQARWRLEQAVEIAVA
SKRWDAAGVAAFALGELLGGDDASTTAAAFMLHQSCRARDRLRRWLHEAL
PRSNRCRLSLDRVTAAQG
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